zgc:162944 (LOC104958623,LOC102208337,LOC101482774)


Basic Information

Item Value
gene id zgc:162944
gene name LOC104958623,LOC102208337,LOC101482774
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 22744460 ~ 22747518 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039817904.1
GTGCAGAAGAATAAGAAGTAGAAGAAGGGGGCGTCCTCTCCGCTGACTGACAGTCCGCCATGCTCACCCTGCTGCACCACTGTAGTCGTAACTTCTTGACATTCAGCACAATTCAGACAGTTAATAGAAGTTACTACACGACACAGATGGGTAAGCGCGTGGCTGTGGTGTTGGCAGGCTGCGGAGTTTATGATGGCAGTGAGATCCACGAGGCCTCCGCTGTTTTGGTCCACCTGAGCAGAGGAGGTGCAAGTGTAAACATGTTTGCCCCAAACATTGACCAGATGCACGTGGTGAATCACCTGAAAGGCGAACCGTCTGAAGAGAAGAGAAATGTGTTGGTGGAGAGTGCAAGACTGGCCCGTGGAGACATCCAGGACCTGTCTAAACTCAGTGTTAAAGACCATGATGCTGTTATCTTCCCAGGCGGTTTTGGTGCAGCGAAGAACCTCTGTACGTGGGCCGTGCAAGGGAAGGACTGCTCCGTTAATGACGAGGTTAAGGCAACGCTGCAGGCGTTCCACGGTGAGGGTAAACCCATCGGCCTCTGCTGCATCTCACCTGTCCTGGCTGCCAAGGTGTTTCCTGGCTGTGAGGTCACCGTCGGTATCGAGAAGGATGACAAGTATCCCGACACTACTGACACCGCAGCGGCCATCAACCAGTTGGGCTGCAAGCACGTGAGTAAGAGCGTCAGCGAGAGCCACGTGGACGAGAAGAACAAGCTGGTCACCACCTCTGCGTTCATGTGCAAAGCTCCAATACATGAGATATTTGATGGAATCGGAGCGATGGTGCAGGATGTGTTGAAACTTGCTTAAGTGTACTAGAAAGATGGCGGAAACGGAAAGAAAAGAATGGGGTGCTGTTGTTTAAGAGAGCTTAATAGTTGCCGCCTGCTGAACTGAGATAGAATGATGTTACAGTAACTCTTCGATTTAAAAACGCTTCCATATACTCTTAAAATATACATGTTTGTAATAGTAATGTGTACTACATGGTCTGATTTATTTTGCCAAAATCTCCATTTGACTAAATCTTATTGGATTACATTCTAATACAGTGGATCCGTATGATGTTGGCAATGCTAATCACGTTTTAGAAAATCAACAGCAACTAttgtacaaaaaaaatgcaataaaatgaaACTGTTCACGTT

Function

NR:

description
PREDICTED: ES1 protein homolog, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039817904.1 True 1159 mRNA 0.47 4 22744460 22747518

Neighbor

gene id symbol gene type direction distance location
mycbp2 mycbp2,LOC102794783 coding upstream 14037 22668306 ~ 22730423 (+)
tfg tfg coding upstream 394401 22332905 ~ 22350059 (+)
jagn1a LOC104964438,LOC103371888,LOC106923881,LOC103134718 coding upstream 411659 22330500 ~ 22332801 (+)
col8a1a col8a1 coding upstream 414828 22316100 ~ 22329632 (+)
tmem30c LOC104964416 coding upstream 471837 22268840 ~ 22272623 (+)
kctd12.1 kctd12 coding downstream 5587 22753105 ~ 22754604 (+)
commd6 commd6,LOC102792157 coding downstream 103423 22850941 ~ 22855543 (+)
tbc1d4 tbc1d4 coding downstream 109432 22856950 ~ 22887388 (+)
klf12b klf12 coding downstream 166683 22914201 ~ 22960754 (+)
clybl clybl coding downstream 412447 23159965 ~ 23222241 (+)
G126290 NA non-coding upstream 85568 22657517 ~ 22658892 (+)
G126280 LOC104958628,LOC108232414,LOC106098708 non-coding upstream 104698 22639470 ~ 22639762 (+)
G126267 NA non-coding upstream 123852 22616311 ~ 22620608 (+)
G126246 NA non-coding upstream 206947 22535131 ~ 22537513 (+)
G126175 NA non-coding upstream 298339 22445328 ~ 22446121 (+)
G126352 NA non-coding downstream 23192 22770710 ~ 22770920 (+)
G126358 NA non-coding downstream 50383 22797901 ~ 22798312 (+)
LOC120569671 NA non-coding downstream 219108 22966626 ~ 22969170 (+)
G126439 zic5,LOC102789084 non-coding downstream 485349 23232867 ~ 23236823 (+)
G126447 NA non-coding downstream 605059 23352577 ~ 23352820 (+)
fbxl3a fbxl3 other upstream 5807 22730923 ~ 22738653 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other upstream 1052656 21655126 ~ 21691804 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other upstream 1109703 21619348 ~ 21634757 (+)
G125757 rpl24 other upstream 1879018 20860152 ~ 20865442 (+)
mpc2b mpc2 other upstream 1885544 20853089 ~ 20858916 (+)
G126363 lmo7 other downstream 59675 22807193 ~ 22815102 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other downstream 231084 22978602 ~ 23100083 (+)
cwc22 cwc22 other downstream 1436431 24183949 ~ 24199835 (+)
sestd1 sestd1 other downstream 1529639 24277157 ~ 24298218 (+)
fzd5 LOC104950716,LOC108238837 other downstream 1624953 24372471 ~ 24394985 (+)

Expression


Co-expression Network