mrpl30 (mrpl30,LOC102785580)


Basic Information

Item Value
gene id mrpl30
gene name mrpl30,LOC102785580
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 21468365 ~ 21471668 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039818351.1
TTCAATGTAACCCCTCGATGTTTCCGGTTTATACATCCATGGAGGAGACAAAACTGTCATGATGCTTACTTACTGTTGCAGTTGTTTTTCAGCTCTTGAATTAATGTTGTACGTGTGAATTTGATGTATATATAGTTacgtttgtgtttttattcataACGTTTAGTTACGTTTGATCCACGCGCTTATTTTGCGGTTAGCAGGGCTGGACGTTAAAGGTAACCTTGGCGTGCGTGACTATTTTTTTTGTACCTGGGTGCCCGTTAACAGTAAAACtacggaaaaaaaaaacatgtcggGTGTCTGTCACGGTTTGAGCTCTTTATCATTCAAGTTCCTGTCAGAAGCTACACTTTTGTCACCTTGCCCATGGTTTGTGTCTGCACGCAGCAAATTTACCAAAGCAAGAATCCCAAAAGAGGTTTTTGCAGAGAGATCAAAAGAACATGAGAAATATGGGGGAGATCCAGACCAACCTCATAAACTGCATATAGTGACACGAGTCAAAAGTACGATGCGCAGACCGTACTGGGAGAAAGAGATGGTGAAACATCTTGGGCTTGAGAAGGCACATGTTCCTgtaattcacaaaaatacacctGCGGTCAATAGCCAACTGAAATTCGTCAAGCACCTCGTCAGGATCCAGCCCTTGAGGACGCCCTATGGACTCCCTGCTGAGCAGGACATGGGTGACACCTACATTAACAGCAAAGGGGAGTTGATTGTTCGTCGCCTCCTCCAACCTGCAGACCCCAAGGCTATCGAGTCTTAGCTCTGCTTCCAATCATATCAATTAATAGTTCAATCGTTCATAAATATCATTAAAAATCTTGTGCTCCATA

Function

symbol description
mrpl30 Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of large ribosomal subunit. Predicted to be active in mitochondrion. Orthologous to human MRPL30 (mitochondrial ribosomal protein L30).

NR:

description
39S ribosomal protein L30, mitochondrial

GO: NA

KEGG:

id description
K02907 RP-L30, MRPL30, rpmD; large subunit ribosomal protein L30

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039818351.1 True 845 mRNA 0.43 5 21468365 21471668

Neighbor

gene id symbol gene type direction distance location
si:dkey-4e7.3 LOC103368133 coding upstream 61464 21398530 ~ 21406901 (+)
inpp4aa inpp4a,LOC106581879 coding upstream 81809 21369820 ~ 21386556 (+)
mfsd9 mfsd9 coding upstream 115708 21345532 ~ 21352657 (+)
LOC120570592 fhl2,LOC104956538 coding upstream 193737 21269253 ~ 21274628 (+)
uxs1 uxs1 coding upstream 274221 21152480 ~ 21194144 (+)
arhgef7a arhgef7,LOC103372297,LOC102301399,LOC106582025 coding downstream 46834 21518502 ~ 21550035 (+)
mcf2lb LOC100707473,LOC101480000,LOC102199374,LOC103372300 coding downstream 220553 21692221 ~ 21742235 (+)
phf11 NA coding downstream 272080 21743748 ~ 21755526 (+)
trim13 trim13 coding downstream 321606 21793274 ~ 21809912 (+)
rnaseh2b rnaseh2b coding downstream 376983 21848651 ~ 21854501 (+)
G125992 mitd1,LOC102785871 non-coding upstream 233 21465910 ~ 21468132 (+)
G125958 NA non-coding upstream 58400 21409192 ~ 21409965 (+)
G125957 NA non-coding upstream 59252 21407513 ~ 21409113 (+)
G125915 NA non-coding upstream 192525 21275443 ~ 21275840 (+)
G125904 NA non-coding upstream 258623 21208959 ~ 21209742 (+)
G125994 txndc9 non-coding downstream 1495 21473163 ~ 21476750 (+)
G126000 NA non-coding downstream 8261 21479929 ~ 21482025 (+)
G126160 LOC103371890 non-coding downstream 879359 22351027 ~ 22352358 (+)
G126162 LOC103371890 non-coding downstream 884426 22356094 ~ 22357669 (+)
G126169 NA non-coding downstream 913861 22385529 ~ 22385754 (+)
G125757 rpl24 other upstream 602923 20860152 ~ 20865442 (+)
mpc2b mpc2 other upstream 609449 20853089 ~ 20858916 (+)
G125627 LOC108259060,LOC105016494,LOC108266561,LOC104955100 other upstream 947091 20492178 ~ 20521274 (+)
myo16 myo16,LOC103372229 other upstream 1202775 20153855 ~ 20265590 (+)
LOC120569357 LOC103369896,LOC102289365,LOC102197623,LOC101484406 other upstream 1475041 19968360 ~ 19993324 (+)
sox1a LOC103372296,LOC101481640,LOC100691128 other downstream 147680 21619348 ~ 21634757 (+)
LOC120569986 LOC103372298,LOC100698342,LOC102199663,LOC102299751,LOC101469554,LOC102782232 other downstream 183458 21655126 ~ 21691804 (+)
fbxl3a fbxl3 other downstream 1259255 22730923 ~ 22738653 (+)
G126363 lmo7 other downstream 1335525 22807193 ~ 22815102 (+)
dachd LOC107389725,LOC105927577,LOC103357501,LOC103134744 other downstream 1506934 22978602 ~ 23100083 (+)

Expression


Co-expression Network