ehd2b (ehd2)


Basic Information

Item Value
gene id ehd2b
gene name ehd2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 47158045 ~ 47170349 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039785285.1
TGAGCAGAGTGTTGGTGCTGCCCACAGTGTTGCCAGGCATCCCTGGAAGAGGAGGTGCATTAAATTTGGAGAAGCAAGCCAGGGGAGAGTGAAGAAGTTGGCCTcagtgtggtgtgtctgtgtctcactGTTTTCCTTGTGCTCTTACGGAACCTTTTGCCAGATTTGGAGCTCATCTGAAATCCATTTAAACCCCTGGAGAAGAAGGATCGCCTGTAATCTGGCTGCGTTGATGCTCCACTGAGGGTTCCTATTTGCCGTCAAAGAGGTGTATATACATGTAGCAGCAGCTCCTCCAAGAGACTGTTTTCTGTCTCCTCAAGTCCAAATATTTTCCAAGCTCCAGAGGGCAggactgcagagagagagatcaaGACGCTTGAAGGCTGTGCTTTCTCCATAATAACTTGGGGCTAAAAGTGATCAGTGTGGCAACTGTTGTCGAAGGGAGAGACTTGAAACAGAACATCGGCCCTATCGTTCCTCTCGGCGTGTGCGCAGGAGGTTTCAAGGACAAGTGAGCAGCGTTCACACAAATACAGGAAACACCTGAAGGTTTTCCAAGGTTCCAGCCACAGGAAATACAGCTCCAAACAACAGACGCACTCTGacactgatatatatatatatatatatttttttatttattttttattttttgtaagaaGCTCAATCAACATGTCCCGCTGGGGGAGAAAAGATGTGAAGAAGGCCCCTGAGGTGATCCGCACCGTGACAGAAGGGCTCAAGTCCTTGTATCGCAAGAAGCTGCTGCCTCTGGAGGAGTACTATGGTTTCCATGACTTCCACTCTCTCAGTCTGGAGGACGCGGACTTCGATAACAAGCCTATGGTGCTGGTGGTGGGACAGTACTCCACTGGAAAGACAACGTTCATCAAGTATCTACTGGAGCAGGATATTCCTGGGAGCAGGGTGGGACCCGAACCCACCACCGACTGCTTCACTGCCATCATGCACGGGGAGGTGGAGGGAGTCATCCCCGGGAACGCCCTCATCGTAGACCCCAACAAGCCTTTCCGCAAACTCAACCCTTTCGGAAACACCTTTCTCAACAGGTTCCAGTGCGCCCAGATGCCCAACCAGGTCCTGGAGAGCATCAGCATCATCGACACGCCGGGGATCCTGTCCGGGGCCAAGCAGAGAGTGAGCAGAGGTGAGAGACGCGACAAAGGCTACGACTTCCCGGCGGTGCTGCGCTGGTTTGCCGAGCGCGTGGACCGCATCATCCTGCTGTTTGACGCCCACAAACTGGAGATCTCGGACGAGTTCTCCGAGGCTATCGGCGCCCTGAAAGGCAACGAGGACAAGCTGCGCGTGGTGCTCAACAAGGCCGACATGGTGGGCACCCAGCAGCTGATGAGGGTGTACGGCGCACTCATGTGGTCCCTGGGGAAGGTGTTTGGCACCCCGGAGGTTCTGCGCGTCTACATCGGCTCCTTCTGGTCCGAGCCGCTGATGGTGGCCGACAACCGGAAGCTGTttgagctggaggaggaggatctGTTCGCCGACATCCAAAACCTCCCTCGCAACGCAGCTTTACGCAAGCTCAATGACCTGGTCAAGAGGGCGCGTCTGGTCAGGGTCCATGCCCACATCATCAGCTATCTGAAGCAGGAGATGCCTTCTGTCTTCAGGAAGGACAACAAAAAGAAGAATCTGATCTACCAGCTGCCAGTGATTTTCTCGAAGATCCAGCTGCAGCACAACATTTCTCCCGGAGACTTCCCAGACTGTGCCAAGATGCAGGAGCAACTGATGGTTCACGACTTCTCCAAGTTCAAAACCTTGAAGCCCAATCTGATGATGGCCTTGGACGAGTTGCTCTCCGCGGACATCTCCAAGCTGATGCCCCTGCTGCggcaggaggagctggaggcaGGCGAGCAGCCGGGCGTGCAGGGCGGGGCCTTCATCGGGACCCGCGCCGGGCCGTTCGGGGAGGGTGACCCCTTCACTCTGGAGAACGGAGAGGGAtgcgaggaggaggaagactgGGTGGTGACCAAAGACAAGCCCAAGTATGACGAGATCTTCTACAACCTGGCTCCCAGCGAGGGGAAGCTGAGCGGCAACAAGGCCAAGGACTGGATGGAGAGCTCCCGCCTGCCCAACTCGGTCCTGGGTCGCATCTGGAAGCTGTCCGACGTGGACCACGACGGCATGCTGGATGACGAAGAGTTTGCCCTGGCCAGCCACCTGATCGAGGTGAAGCTGGAGGGCCACGGCCTGCCCCCAGAGCTTCCCACGCGCCTGATCCCGCCCTCCAAACGCAGGCAGAAGGGTTCGGATGCATAGACATGACACAAGTCCCTGGAGCTGAGAGAGACTCTTCTCTACGGGCTGTGCCACCGTTTGTAATTGCTCTTGTCTTCTCCCCAGACCCACGTCAAAACGTTTGTATGTAATGcgtttagagctgcaaagattaatcgattagttgtgtCAACTAATTAAGTCATTTGccaattattttgataatcgataaatcggtttgagtcatttgttatggggggaaaaaaaatgaaaacttcTCTGATTCCATCTTgtttaatgtgactattttctagtttcttctctcctctgtgacagtaaactgaatatctttcagttggggacaaaacaagacatttgaggacgtcatgtCGGGCTTTGGGGAACACCGATTGACATTTTTTCTACCGtttcctgacattttagagaccaaacaactaatcgattaaccgagaaaataatcgacagattgattcagctacagtacaggccaacagtttggacacaccttctcattcaatgtgtttctttatttt
>XM_039785292.1
GAGCAGAGTGTTGGTGCTGCCCACAGTGTTGCCAGGCATCCCTGGAAGAGGAGGTGCATTAAATTTGGAGAAGCAAGCCAGGGGAGAGTGAAGAAGTTGGCCTcagtgtggtgtgtctgtgtctcactGTTTTCCTTGTGCTCTTACGGAACCTTTTGCCAGATTTGGAGCTCATCTGAAATCCATTTAAACCCCTGGAGAAGAAGGATCGCCTGTAATCTGGCTGCGTTGATGCTCCACTGAGGGTTCCTATTTGCCGTCAAAGAGGTGTATATACATGTAGCAGCAGCTCCTCCAAGAGACTGTTTTCTGTCTCCTCAAGTCCAAATATTTTCCAAGCTCCAGAGGGCAggactgcagagagagagatcaaGACGCTTGAAGGCTGTGCTTTCTCCATAATAACTTGGGGCTAAAAGTGATCAGTGTGGCAACTGTTGTCGAAGGGAGAGACTTGAAACAGAACATCGGCCCTATCGTTCCTCTCGGCGTGTGCGCAGGAGGTTTCAAGGACAAGTGAGCAGCGTTCACACAAATACAGGAAACACCTGAAGGTTTTCCAAGGTTCCAGCCACAGGAAATACAGCTCCAAACAACAGACGCACTCTGacactgatatatatatatatatatatttttttatttattttttattttttgtaagaaGCTCAATCAACATGTCCCGCTGGGGGAGAAAAGATGTGAAGAAGGCCCCTGAGGTGATCCGCACCGTGACAGAAGGGCTCAAGTCCTTGTATCGCAAGAAGCTGCTGCCTCTGGAGGAGTACTATGGTTTCCATGACTTCCACTCTCTCAGTCTGGAGGACGCGGACTTCGATAACAAGCCTATGGTGCTGGTGGTGGGACAGTACTCCACTGGAAAGACAACGTTCATCAAGTATCTACTGGAGCAGGATATTCCTGGGAGCAGGGTGGGACCCGAACCCACCACCGACTGCTTCACTGCCATCATGCACGGGGAGGTGGAGGGAGTCATCCCCGGGAACGCCCTCATCGTAGACCCCAACAAGCCTTTCCGCAAACTCAACCCTTTCGGAAACACCTTTCTCAACAGGTTCCAGTGCGCCCAGATGCCCAACCAGGTCCTGGAGAGCATCAGCATCATCGACACGCCGGGGATCCTGTCCGGGGCCAAGCAGAGAGTGAGCAGAGGCTACGACTTCCCGGCGGTGCTGCGCTGGTTTGCCGAGCGCGTGGACCGCATCATCCTGCTGTTTGACGCCCACAAACTGGAGATCTCGGACGAGTTCTCCGAGGCTATCGGCGCCCTGAAAGGCAACGAGGACAAGCTGCGCGTGGTGCTCAACAAGGCCGACATGGTGGGCACCCAGCAGCTGATGAGGGTGTACGGCGCACTCATGTGGTCCCTGGGGAAGGTGTTTGGCACCCCGGAGGTTCTGCGCGTCTACATCGGCTCCTTCTGGTCCGAGCCGCTGATGGTGGCCGACAACCGGAAGCTGTttgagctggaggaggaggatctGTTCGCCGACATCCAAAACCTCCCTCGCAACGCAGCTTTACGCAAGCTCAATGACCTGGTCAAGAGGGCGCGTCTGGTCAGGGTCCATGCCCACATCATCAGCTATCTGAAGCAGGAGATGCCTTCTGTCTTCAGGAAGGACAACAAAAAGAAGAATCTGATCTACCAGCTGCCAGTGATTTTCTCGAAGATCCAGCTGCAGCACAACATTTCTCCCGGAGACTTCCCAGACTGTGCCAAGATGCAGGAGCAACTGATGGTTCACGACTTCTCCAAGTTCAAAACCTTGAAGCCCAATCTGATGATGGCCTTGGACGAGTTGCTCTCCGCGGACATCTCCAAGCTGATGCCCCTGCTGCggcaggaggagctggaggcaGGCGAGCAGCCGGGCGTGCAGGGCGGGGCCTTCATCGGGACCCGCGCCGGGCCGTTCGGGGAGGGTGACCCCTTCACTCTGGAGAACGGAGAGGGAtgcgaggaggaggaagactgGGTGGTGACCAAAGACAAGCCCAAGTATGACGAGATCTTCTACAACCTGGCTCCCAGCGAGGGGAAGCTGAGCGGCAACAAGGCCAAGGACTGGATGGAGAGCTCCCGCCTGCCCAACTCGGTCCTGGGTCGCATCTGGAAGCTGTCCGACGTGGACCACGACGGCATGCTGGATGACGAAGAGTTTGCCCTGGCCAGCCACCTGATCGAGGTGAAGCTGGAGGGCCACGGCCTGCCCCCAGAGCTTCCCACGCGCCTGATCCCGCCCTCCAAACGCAGGCAGAAGGGTTCGGATGCATAGACATGACACAAGTCCCTGGAGCTGAGAGAGACTCTTCTCTACGGGCTGTGCCACCGTTTGTAATTGCTCTTGTCTTCTCCCCAGACCCACGTCAAAACGTTTGTATGTAATGcgtttagagctgcaaagattaatcgattagttgtgtCAACTAATTAAGTCATTTGccaattattttgataatcgataaatcggtttgagtcatttgttatggggggaaaaaaaatgaaaacttcTCTGATTCCATCTTgtttaatgtgactattttctagtttcttctctcctctgtgacagtaaactgaatatctttcagttggggacaaaacaagacatttgaggacgtcatgtCGGGCTTTGGGGAACACCGATTGACATTTTTTCTACCGtttcctgacattttagagaccaaacaactaatcgattaaccgagaaaataatcgacagattgattcagctacagtacaggccaacagtttggacacaccttctcattcaatgtgtttctttatttt

Function

symbol description
ehd2 Predicted to enable nucleic acid binding activity. Involved in endocytic recycling. Located in several cellular components, including caveola; intercellular bridge; and recycling endosome membrane.

NR:

description
PREDICTED: EH domain-containing protein 2-like

GO:

id name namespace
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005509 calcium ion binding molecular_function
GO:0005525 GTP binding molecular_function

KEGG:

id description
K12469 EHD2; EH domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039785285.1 True 2831 mRNA 0.52 7 47158045 47170349
XM_039785292.1 False 2812 mRNA 0.52 7 47158045 47170348

Neighbor

gene id symbol gene type direction distance location
psmd8 psmd8,LOC102787089 coding downstream 7435 47143741 ~ 47150610 (-)
exosc5 exosc5 coding downstream 23344 47118397 ~ 47134701 (-)
akap1b akap1 coding downstream 1253038 45872223 ~ 45905007 (-)
cuedc1b cuedc1 coding downstream 1296953 45815082 ~ 45861092 (-)
wsb1 wsb1 coding downstream 1349623 45784600 ~ 45808422 (-)
bicra gltscr1 coding upstream 1878 47172227 ~ 47188363 (-)
bckdha bckdha,LOC102788451 coding upstream 45512 47215861 ~ 47225227 (-)
LOC120549478 NA coding upstream 64204 47234553 ~ 47275950 (-)
st14a NA coding upstream 155909 47326258 ~ 47355399 (-)
aplp2 aplp2,LOC102785027 coding upstream 189764 47360113 ~ 47469462 (-)
G24489 NA non-coding downstream 382 47109647 ~ 47157663 (-)
G24378 NA non-coding downstream 129434 47028256 ~ 47028611 (-)
G24377 NA non-coding downstream 137970 47019238 ~ 47020075 (-)
G24376 NA non-coding downstream 141563 47016278 ~ 47016482 (-)
G24361 NA non-coding downstream 150218 46962918 ~ 47007827 (-)
G24499 NA non-coding upstream 24140 47194489 ~ 47198862 (-)
G24494 NA non-coding upstream 34884 47205233 ~ 47206787 (-)
G24503 NA non-coding upstream 37192 47207541 ~ 47207790 (-)
G24504 NA non-coding upstream 38105 47208454 ~ 47208835 (-)
G24505 NA non-coding upstream 39858 47210207 ~ 47210412 (-)
bet1l bet1l other downstream 15449 47134854 ~ 47142596 (-)
mrps23 mrps23 other downstream 2333052 44816628 ~ 44824993 (-)
smco4 NA other downstream 3368610 43770066 ~ 43789435 (-)
LOC120553425 NA other downstream 3441304 43700971 ~ 43716741 (-)
LOC120574039 nlk,nlk2 other downstream 3811372 43236682 ~ 43346673 (-)
dhx34 dhx34,LOC102778731 other upstream 125205 47295554 ~ 47325453 (-)
nectin1b nectin1,LOC102782356 other upstream 987004 48157353 ~ 48398620 (-)

Expression


Co-expression Network