G130321


Basic Information

Item Value
gene id G130321
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 198427 ~ 198785 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU175573
aattgaatgtaataccgcacccgctgcgccgattctccgaccaatctcccgctccattgtccccttactcgcgaacaaaaccccaaggtaattaaactccttcacttggggtaaggactcattccctacctggagtaggcactccatcggtttcctgctgagaaccatggcctcagatttagaggtgctgatcctcatcccagcccgCTACTTCGCACGagccgatccagtgagtgctgaaggtcacaggccgatgatgccatcaggaccacatcatctgcaaagagcagcgatgagatccccagcccaccgaactgcaacccctccccaccccgactacgccttgatatcctgtccat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175573 True 359 lncRNA 0.55 1 198427 198785

Neighbor

gene id symbol gene type direction distance location
LOC120571994 LOC104933055,LOC103358889,LOC100701039,LOC101482166,LOC104967467 coding upstream 42797 152868 ~ 155630 (+)
c13h6orf136 LOC103142788 coding downstream 61286 260071 ~ 291340 (+)
LOC120571643 NA coding downstream 252603 451388 ~ 453849 (+)
ilf2 ilf2,LOC105924049 coding downstream 353914 552699 ~ 562141 (+)
chtopa chtop coding downstream 448886 647671 ~ 657527 (+)
txnipa txnip,LOC104933059 coding downstream 474348 673133 ~ 677328 (+)
LOC120571819 NA non-coding upstream 12526 185485 ~ 185901 (+)
G130319 NA non-coding upstream 18794 179352 ~ 179633 (+)
G130317 NA non-coding upstream 19184 178988 ~ 179243 (+)
G130315 NA non-coding upstream 26648 171445 ~ 171779 (+)
G130306 NA non-coding upstream 74405 123820 ~ 124022 (+)
G130335 NA non-coding downstream 42265 241050 ~ 241261 (+)
G130344 LOC103357002 non-coding downstream 97910 296695 ~ 307217 (+)
G130348 NA non-coding downstream 127099 325884 ~ 346541 (+)
G130355 NA non-coding downstream 183088 381873 ~ 382428 (+)
G130359 NA non-coding downstream 202655 401440 ~ 406621 (+)
G130343 LOC107386814 other downstream 70391 269176 ~ 269924 (+)
si:ch211-152p11.4 LOC106593811 other downstream 154520 353305 ~ 381641 (+)
G130504 NA other downstream 672025 870810 ~ 871350 (+)
sf3a3 sf3a3 other downstream 2850240 3049025 ~ 3076057 (+)
LOC120571299 rarb,LOC103362260 other downstream 3394760 3593545 ~ 3826146 (+)

Expression


Co-expression Network