XLOC_004807


Basic Information

Item Value
gene id XLOC_004807
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 30470981 ~ 30475152 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00010951
CATAGAGAAGGCTTCTGCCCTCGTCCCAGGAAACCCCTAATGGATGCTGCAGTTTAGCATCGATGCCTTTACCATCAACATCTCCAAATGCAAACAGGTTCTGAGGGTCTCTCTCTCCCCCCACCACATGTTTGACTGCGCCATCCTTCAGTGAAAGGCTGCGAATGGTGCTGCTCTCACTGTCAGCAATGAAGAGACTCTCCCAGGGCTCTGTCGGGGCAAGAGCCAAGCCTGATGGCTGTGCCAGACCTGCTTTATGAGGGTACGCGTTATTTCGGTTCTCCTCATTTCCACTGCCCGCAAAGCGCACACATGTTCCTGCTTTGCTGTCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00010951 True 332 lncRNA 0.54 2 30470981 30475152

Neighbor

gene id symbol gene type direction distance location
XLOC_004806 CR932360.2 coding upstream 38017 30429833 ~ 30432964 (+)
XLOC_004805 ccdc186 coding upstream 48525 30367079 ~ 30422456 (+)
XLOC_004804 si:ch211-225b10.3 coding upstream 103973 30360184 ~ 30367008 (+)
XLOC_004803 afap1l2 coding upstream 162630 30233977 ~ 30308351 (+)
XLOC_004802 ablim1b coding upstream 250635 30046320 ~ 30220346 (+)
XLOC_004808 CU695011.2 coding downstream 23260 30498412 ~ 30529576 (+)
XLOC_004809 dclre1a coding downstream 25892 30501044 ~ 30516095 (+)
XLOC_004810 CU695011.1 coding downstream 34131 30509283 ~ 30509399 (+)
XLOC_004811 si:ch211-28p3.4 coding downstream 88398 30563550 ~ 30567711 (+)
XLOC_004812 nrap coding downstream 111447 30586599 ~ 30618440 (+)
XLOC_004801 CU464184.1 non-coding upstream 500352 29970513 ~ 29970629 (+)
XLOC_004800 CU464184.2 non-coding upstream 510927 29959940 ~ 29960054 (+)
XLOC_004799 BX004794.2 non-coding upstream 659021 29811844 ~ 29811960 (+)
XLOC_004797 BX072570.2 non-coding upstream 1038790 29432075 ~ 29432191 (+)
XLOC_004813 NA non-coding downstream 154867 30630019 ~ 30633002 (+)
XLOC_004814 NA non-coding downstream 156644 30631796 ~ 30632376 (+)
XLOC_004815 NA non-coding downstream 161233 30636385 ~ 30651026 (+)
XLOC_004820 CR751608.1 non-coding downstream 458699 30933851 ~ 30952692 (+)

Expression


Co-expression Network