LOC120571424 (LOC106633724)


Basic Information

Item Value
gene id LOC120571424
gene name LOC106633724
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053124.1
NCBI id CM020921.1
chromosome length 39224300
location 35515121 ~ 35515782 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039820368.1
TGCAACAGCGTATCACATGCTGTTATTACATCAGAGCTCAGACTAGTTTCATTTCTCAGGAAGTGAGACAcaagacagtcagacagtcgtagtcactgagcgagaggtgaaatggcgcagaaaggAGTTGAGCTTGACCGGAGGAAGCCTTCTCTTTGTTCCATCTGTCTGcgatctactgaaggatccggtgactatTACCTGTCgacacagctactgcatgaactgtattaaaagccactggGATGAAGAGGATCGTAAGGACAGCTACAGCTGCCCTCAGTGCAGGCAGAGcttcacaccgaggcctgtACTGGTGAAAAACACCAAGTTagcagatttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactggGAGAAAACTCAAAGCCATCAAGTCCTGTCTGCAATGTCTGGCTTCTTACTGTGAGAAACACCTTCAGCCTCATTACGATATAGCTAAgttaaagaaacacaagctggtggagccgtcccaagaagctccaggagaacgtctgctcGCGTGGCGATGAGGTAATGAAGATTTTCTGCcgtactgatcagcagcttatctgttatctctgcttaatggacaaacataaa

Function

NR:

description
PREDICTED: tripartite motif-containing protein 16-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039820368.1 True 662 mRNA 0.48 1 35515121 35515782

Neighbor

gene id symbol gene type direction distance location
LOC120571395 NA coding upstream 47951 35447774 ~ 35467170 (+)
LOC120571399 NA coding upstream 55512 35457547 ~ 35459609 (+)
LOC120570960 LOC106675582 coding upstream 173354 35341072 ~ 35341767 (+)
LOC120571423 fam63a coding upstream 178700 35332912 ~ 35336421 (+)
LOC120571418 NA coding upstream 188106 35317578 ~ 35327015 (+)
LOC120570967 LOC106675582 coding downstream 438073 35953855 ~ 35955159 (+)
LOC120571435 NA coding downstream 440635 35956417 ~ 35958468 (+)
riok1 riok1 coding downstream 464111 35979893 ~ 36004234 (+)
LOC120570972 NA coding downstream 632739 36148521 ~ 36153226 (+)
LOC120571441 NA coding downstream 679568 36195350 ~ 36256121 (+)
G138781 NA non-coding upstream 24207 35488607 ~ 35490914 (+)
G138728 NA non-coding upstream 47280 35460424 ~ 35467841 (+)
G138670 NA non-coding upstream 125868 35326329 ~ 35389253 (+)
G138721 NA non-coding upstream 141549 35337133 ~ 35373572 (+)
G138772 NA non-coding upstream 158643 35347032 ~ 35356478 (+)
G138748 LOC106676976 non-coding downstream 34987 35550769 ~ 36011779 (+)
G138719 NA non-coding downstream 42931 35558713 ~ 35566787 (+)
G138725 NA non-coding downstream 100878 35616660 ~ 35704687 (+)
G138795 NA non-coding downstream 118655 35634437 ~ 35635272 (+)
G138799 NA non-coding downstream 149313 35665095 ~ 35665716 (+)
G138692 LOC106676976,LOC106675582 other upstream 17503 35439291 ~ 35497618 (+)
mindy1 fam63a other upstream 70793 35378839 ~ 35444328 (+)
LOC120570961 NA other upstream 137915 35371967 ~ 35377206 (+)
mllt11 NA other upstream 198257 35299287 ~ 35316864 (+)
LOC120570959 NA other upstream 224866 35240295 ~ 35290255 (+)
LOC120570963 fam63a,LOC107589430 other downstream 3134 35518916 ~ 35614565 (+)
G138806 NA other downstream 191118 35706900 ~ 35724402 (+)
LOC120571439 LOC106675582 other downstream 287522 35803304 ~ 35818966 (+)
LOC120571445 LOC106675582,LOC106676976 other downstream 494205 36009987 ~ 36104537 (+)
G138676 NA other downstream 549589 36065371 ~ 36257319 (+)

Expression


Co-expression Network