G140451


Basic Information

Item Value
gene id G140451
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1519821 ~ 1521839 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189404
TTGAAAAGTTGGAGCAAAGATCAGCTGAAGTTCAGGCTGAAAACATGAAGGTGCGTCAGAGGATTCGGAAAAAGAGCATCCGAAGTGGGAAGAATGACCGAAAACCTTTTGCCTGTGGCTGTTAACGGTGGTATAACGGCGATATGTGGCCTTGTAGGGGCTCATTTTCTAAGTCTCCAGTGCCCCTTCAACCCCTGAAGAGAAAGACAGGTTAGAGTACTCCATCTTCCAGTCAGCTGATCACTGTGAGAGGAGTTGGAACATATGGAGAATACACTTCAGACTACACAGTACAGTCTTCAGATACAAGTAACGATAGaagctgcagagagagaagaaaggccTCATTTAAACTAAACCATCAAGACTCACTAAATCTGCAGTTTTTgtttacacattttaaattggAGACACAAATGATCCTCCCAATCTGAACTCCTCAGTCAGAATGCATTTTAATTCTCTGAACATGATGCTGCTTctaaatctgttattttactgTATAAACATAGTTTCAGATACAGAACAGAAAACAAGTCTGATAAACTTTGATATAAAGAATGTGCGTGCCAACTAAGAATAAATTATTAGTAAATCAGAAGTGACGTACCAGTGCTACAAGATGACAGCAGCTGCATCTGATGCACCATTATGGGAACCGTGCtaatgtttcacaataaaagccttgATAGGAAACGTATGTACGTacgcacacactttttttttttcttctgattgGTCACCAACACAGGACAACATAATATCTGCCTGTACCATACATGTATCCATTCAGAGTCTGGTCCTACAGTGGGCACCACAGTGTGGATATTTAGCACATATTTAAGTCAAGtctctgtttttattgtagtttatattctgtattttacttcttgtttgctgctgcaacacaaatATGCCCtgttgggattaataaagtactcTATCCATCTATTACAATGAAGATTTGCACTCTTAAAATTTCTAtaactgtgttttgtttgtccCTAGCTGGGACTCTAGCTGCAGAGTGGACAGCTGATGATCAGACGACTTAATATGGAAAGGAAAAGGATCAACTGAAGCCACGCTGCTCTGCTTCATTTTCTACAGAGACAGTTGTCATGGCATAAGCAACCCTGGGCAACATGATTAATCTGGTTAGGTCTAGGATTGGACTCCAACCCTAACCCAGGAAACAGACCGCTGCTTGCAAACTCTTTGTGCCTAAACGGGATGCGAAGAGGGGCAGTGGGCgaccgtggaggtgggctgtagGCTGCCCACCCAATCAGAAGTTAGAAACGACTATTTTTTCCATTGGCTGAAcacattttctcttttgtttacCGCTGTCCTTAGCTACCCTCCAACTTTCATCTACAGTAGAATATTCCCCCAATTTCTACATAGAATGTGTTAAATTCATGTTAAAGCTTtggtgtgtaactttttgatattaatgaacatccgttacattcaagccattgcctaataagttgctacaaagcttaTTCAGAATCAAATCGAATTCAATCAGCTCCacccaactctctctggatttctcagtatgactatgttcagaagattggggcgtccggcgactttctgAAGATAATGacttcttctgaagagtccgtcatggttttttaatcctccgtgtcctccttggctactagcaactgtgtggaggagctTTCATTTCTTATATTGGGACTATACTCTCAAAACGTTTAATCTTTTCCAAGAATTCCAGGGCCAGTGACAAAAATGCTCATGTTGGGACTTTATCCtgctttaaaactttttttaaatgaatagatTAAGCACCAGGCTGACAGCTTGAGCTTCTtgctaaaaggaaaaaaaaaacattttctgtaaTAATAACATATATTCTGCTAATAGTTGTAGCAAAATTGAACTTTCCATTAGCTGTTCAACTAAGTTATTACCCATTACAGGAGGCACAAAGtaaacatttcaataaatagctggttaaaaaaaaaaaaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189404 True 2019 lncRNA 0.39 1 1519821 1521839

Neighbor

gene id symbol gene type direction distance location
LOC120573289 NA coding downstream 19505 1492274 ~ 1500316 (-)
sorcs2 sorcs2 coding downstream 90104 1018258 ~ 1429717 (-)
LOC120573525 mrps28 coding downstream 606141 906545 ~ 913680 (-)
LOC120573590 NA coding downstream 913103 600634 ~ 606718 (-)
LOC120573587 NA coding downstream 1381584 135443 ~ 138237 (-)
slc1a1 slc1a1 coding upstream 28689 1550528 ~ 1574124 (-)
LOC120573508 LOC103361692 coding upstream 138298 1660137 ~ 1664945 (-)
aco1 aco1 coding upstream 227680 1749519 ~ 1774918 (-)
LOC120573473 NA coding upstream 362063 1883902 ~ 1885687 (-)
LOC120572242 NA coding upstream 497773 2019612 ~ 2022367 (-)
G140437 NA non-coding downstream 37116 1481738 ~ 1482705 (-)
G140418 grpel1,LOC102799061 non-coding downstream 41008 1468232 ~ 1478813 (-)
G140413 NA non-coding downstream 56956 1461638 ~ 1462865 (-)
G140404 NA non-coding downstream 200246 1290908 ~ 1319575 (-)
G140401 NA non-coding downstream 364879 1154243 ~ 1154942 (-)
G140454 NA non-coding upstream 8396 1530235 ~ 1530950 (-)
G140492 NA non-coding upstream 141182 1663021 ~ 1663252 (-)
G140514 LOC106908230,LOC105925506,LOC101079287,LOC100690429 non-coding upstream 198086 1719925 ~ 1725333 (-)
LOC120573239 NA non-coding upstream 253998 1775837 ~ 1782596 (-)
G140534 NA non-coding upstream 265465 1787304 ~ 1788089 (-)
tada2b tada2b other downstream 31395 1482789 ~ 1488426 (-)
G140274 NA other downstream 1068151 443550 ~ 451670 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other upstream 101420 1623259 ~ 1649432 (-)
LOC120573528 NA other upstream 405293 1927132 ~ 2032506 (-)
G140615 NA other upstream 529642 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 932227 2454066 ~ 2573483 (-)
arsj arsj other upstream 1075995 2597834 ~ 2622100 (-)

Expression


Co-expression Network