G140552


Basic Information

Item Value
gene id G140552
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1875358 ~ 1882805 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189555
gataggttggatatttcagcctacatgtttcaaatgtattttatatcttgtatgtagTGTACCACAcaagaaggttagtctggggacaaccttcacccacaagaatgtgtaaatctattatgagtttgggtacaactttcacacagaggaattggagccaggaatgtgggaatctattaggagcatcggccataaaaggtgtagtttaagagtaaaacttgtgcactgaaatagatgtctcgtgctgtgtaagcacaaaaagagtttaaaaggtattcactatgatgtacatgtggttcatccttgggcagacgtgtctgtatgctcatggttgtcccagtgtcatgaaagtttgttcactgtttgaataaagctgcacttgatttgtaatcatcggactggtcgtcatctttGAGGTCTCCCTACATCATTTCTGAATCATCACCCGATATCAAAAACTATGACTCATTCATTTCTTATCATTTGGATAAGAATAGTTTCTGCATTAGTGATTGCCCAGAACTTGAGCAGGTTTTGTCTTCTTCAGACTTTTTTCAGAAAGCATGCGATTCAATTCGGTCACCATTCATGATAAAAGAGcac
>TU189556
gataggttggatatttcagcctacatgtttcaaatgtattttatatcttgtatgtagTGTACCACAcaagaaggttagtctggggacaaccttcacccacaagaatgtgtaaatctattatgagtttgggtacaactttcacacagaggaattggagccaggaatgtgggaatctattaggagcatcggccataaaaggtgtagtttaagagtaaaacttgtgcactgaaatagatgtctcgtgctgtgtaagcacaaaaagagtttaaaaggtattcactatgatgtacatgtggttcatccttgggcagacgtgtctgtatgctcatggttgtcccagtgtcatgaaagtttgttcactgtttgaataaagctgcacttgatttgtaatcatcggactggtcgtcatctttGAGGTCTCCCTACATCATTTCTGAATCATCACCCGATATCAAAAACTATGACTCATTCATTTCTTATCATTTGGATAAGAATAGTTTCTGCATTAGTGATTGCCCAGAACTTGAGCAGGTTTTGTCTTCTTCAGACTTTTTTCAGAAAGCATGCGATTCAATTCGGTCACCATTCATGATAAAAGAGcac
>TU189557
gataggttggatatttcagcctacatgtttcaaatgtattttatatcttgtatgtagTGTACCACAcaagaaggttagtctggggacaaccttcacccacaagaatgtgtaaatctattatgagtttgggtacaactttcacacagaggaattggagccaggaatgtgggaatctattaggagcatcggccataaaaggtgtagtttaagagtaaaacttgtgcactgaaatagatgtctcgtgctgtgtaagcacaaaaagagtttaaaaggtattcactatgatgtacatgtggttcatccttgggcagacgtgtctgtatgctcatggttgtcccagtgtcatgaaagtttgttcactgtttgaataaagctgcacttgatttgtaatcatcggactggtcgtcatctttGAGGTCTCCCTACATCATTTCTGAATCATCACCCGATATCAAAAACTATGACTCATTCATTTCTTATCATTTGGATAAGAATAGTTTCTGCATTAGTGATTGCCCAGAACTTGAGCAGGTTTTGTCTTCTTCAGACTTTTTTCAGAAAGCATGCGATTCAATTCGGTCACCATTCATGATAAAAGAGcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189555 True 603 lncRNA 0.39 2 1875358 1882805
TU189556 False 603 lncRNA 0.39 2 1875358 1882805
TU189557 False 603 lncRNA 0.39 2 1875358 1882805

Neighbor

gene id symbol gene type direction distance location
aco1 aco1 coding downstream 100440 1749519 ~ 1774918 (-)
LOC120573508 LOC103361692 coding downstream 210413 1660137 ~ 1664945 (-)
slc1a1 slc1a1 coding downstream 301234 1550528 ~ 1574124 (-)
LOC120573289 NA coding downstream 375042 1492274 ~ 1500316 (-)
sorcs2 sorcs2 coding downstream 445641 1018258 ~ 1429717 (-)
LOC120573473 NA coding upstream 1097 1883902 ~ 1885687 (-)
LOC120572242 NA coding upstream 136807 2019612 ~ 2022367 (-)
pde5ab pde5a coding upstream 796140 2678945 ~ 2797531 (-)
si:dkey-219e21.4 NA coding upstream 929750 2812555 ~ 2818659 (-)
c14h4orf54 NA coding upstream 1234429 3117234 ~ 3128616 (-)
G140548 NA non-coding downstream 36229 1812520 ~ 1839129 (-)
G140553 NA non-coding downstream 39933 1829812 ~ 1835425 (-)
G140536 NA non-coding downstream 83696 1791040 ~ 1791662 (-)
G140535 NA non-coding downstream 84416 1790710 ~ 1790942 (-)
G140534 NA non-coding downstream 87269 1787304 ~ 1788089 (-)
G140572 NA non-coding upstream 10604 1893409 ~ 1893793 (-)
G140597 NA non-coding upstream 18222 1901027 ~ 1905267 (-)
G140601 NA non-coding upstream 24440 1907245 ~ 1908644 (-)
LOC120572355 NA non-coding upstream 55662 1938467 ~ 1941368 (-)
G140603 NA non-coding upstream 76839 1959644 ~ 1963832 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other downstream 225926 1623259 ~ 1649432 (-)
tada2b tada2b other downstream 386932 1482789 ~ 1488426 (-)
G140274 NA other downstream 1423688 443550 ~ 451670 (-)
LOC120573528 NA other upstream 44327 1927132 ~ 2032506 (-)
G140615 NA other upstream 168676 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 571261 2454066 ~ 2573483 (-)
arsj arsj other upstream 715029 2597834 ~ 2622100 (-)
LOC120573530 NA other upstream 1256316 3139121 ~ 3143189 (-)

Expression


Co-expression Network