LOC120573530


Basic Information

Item Value
gene id LOC120573530
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 3139121 ~ 3143189 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU189918
tggaagcgtcgcgcgagcgtgtcagctgcgtggcgtgtccgtttatattttggCTCCTATGTTAAGGCCGGTTATacactgcacgcgtctcgcgagcgtggcgtttctgttgcgtctcagctgcgtggatttttctgtgtcctacataccagaagcgtgtctgacgcggcgctgctcctgctgctaggtacagggagggctgatctcgggacatagtgccgacagatacaaactgataaatggCTGACTGCACACACCTGCTCGTCGTTCCGCAATCACCGCTCCCTGCCGTACACACCTGCCAGCCGGATTCACTCATCATCTCTGCTTGATCGTTGCTTCAGCCACCTGGTTATCTCCTCCATTTCGCTCCGCTACCTCCAGTCAGCTGGCTTCACCATACGGTCCCCTCCTCACGGCTCCCTGTTCCGCCCTGCCTCCGCTCCTGTGTTCAGCCACTCCTCCCTTGACTCCCCGGACTCCAGTGCCTCCTCCTCGGCTCCCCTGGCCCCGGTTTTCCCCTACCTCCAGCCCCAGAAAACCGTCACTGCTGCCCTCGGCATCCGCCTCCCCATTCCCATCCAGTTTCTGTTGCCCAATAAATCTG
>XM_039823321.1
ATGGCGGATGCTCCAATGAATCCCAGGGACATGGACGCACTTGTGAAGAAAATAACAGCAGAAGTCCTAGCGGGTGTTGATAAGTCTTTGGATAACAAGATCGATCCAGTGCTAGAGAAATTGTCTGCTGTAGTGACACATGTCGAGCAGATGGAGAACCGAGTCACTGAAGCTGAAACGCGTATATCGGCGGTGGAAGACACGGTCTCAAGAGACAGCGCGGATTTCTATTTGATTCCCACTGTCAGTTTCCTCTGTTTGCCTGCCtttttctgtttcctgtgtttttccccTCCTCCCGCTTTCTCCTGCCAGCTGACTGCACACACCTGCTCGTCGTTCCGCAATCACCGCTCCCTGCCGTACACACCTGCCAGCCGGATTCACTCATCATCTCTGCTTGATCGTTGCTTCAGCCACCTGGTTATCTCCTCCATTTCGCTCCGCTACCTCCAGTCAGCTGGCTTCACCATACGGTCCCCTCCTCACGGCTCCCTGTTCCGCCCTGCCTCCGCTCCTGTGTTCAGCCACTCCTCCCTTGACTCCCCGGACTCCAGTGCCTCCTCCTCGGCTCCCCTGGCCCCGGTTTTCCCCTACCTCCAGCCCCAGAAAACCGTCACTGCTGCCCTCGGCATCCGCCTCCCCATTCCCATCCAGTTTCTGTTGCCCAATAAATCTGTTTTGTCAAGCCTTGCTTTTGGGTCTGTTCTGTCTCATCATAACAAGAAGGCTTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189918 False 607 lncRNA 0.59 3 3139180 3140180
XM_039823321.1 True 738 mRNA 0.54 3 3139121 3143189

Neighbor

gene id symbol gene type direction distance location
c14h4orf54 NA coding downstream 10505 3117234 ~ 3128616 (-)
si:dkey-219e21.4 NA coding downstream 320462 2812555 ~ 2818659 (-)
pde5ab pde5a coding downstream 341590 2678945 ~ 2797531 (-)
LOC120572242 NA coding downstream 1116754 2019612 ~ 2022367 (-)
LOC120573473 NA coding downstream 1253434 1883902 ~ 1885687 (-)
focad focad coding upstream 23679 3166868 ~ 3252975 (-)
LOC120573709 H2AFZ,LOC100694115,LOC102297571,LOC102200939,LOC101065890 coding upstream 312331 3455520 ~ 3457848 (-)
adam19a LOC108242304,LOC103148901 coding upstream 660797 3803986 ~ 4118384 (-)
ing2 ing2 coding upstream 1113446 4256635 ~ 4259813 (-)
slx1b LOC103361641 coding upstream 1159456 4302645 ~ 4312866 (-)
LOC120572441 NA non-coding downstream 228496 2908630 ~ 2910625 (-)
G140762 NA non-coding downstream 314503 2824313 ~ 2824618 (-)
G140761 NA non-coding downstream 314890 2822870 ~ 2824231 (-)
G140753 NA non-coding downstream 409502 2729281 ~ 2729619 (-)
G140750 NA non-coding downstream 448076 2690317 ~ 2691045 (-)
G140842 NA non-coding upstream 9710 3152899 ~ 3153336 (-)
G140855 NA non-coding upstream 137224 3280413 ~ 3433666 (-)
LOC120573362 NA non-coding upstream 175836 3319025 ~ 3321057 (-)
G140874 NA non-coding upstream 291871 3435060 ~ 3435360 (-)
G140875 NA non-coding upstream 292729 3435918 ~ 3436192 (-)
arsj arsj other downstream 517021 2597834 ~ 2622100 (-)
camk2d1 LOC100695450,LOC101472930 other downstream 565638 2454066 ~ 2573483 (-)
G140615 NA other downstream 1080930 2051481 ~ 2058191 (-)
LOC120573528 NA other downstream 1106615 1927132 ~ 2032506 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other downstream 1489689 1623259 ~ 1649432 (-)
G141003 NA other upstream 1011735 4154924 ~ 4155547 (-)
G141027 NA other upstream 1131462 4274651 ~ 4275274 (-)
LOC120573533 NA other upstream 1178575 4321764 ~ 4332019 (-)
G141145 NA other upstream 1498306 4641495 ~ 4664198 (-)
G141159 taf6l other upstream 1517432 4660621 ~ 4661111 (-)

Expression


Co-expression Network