G141470


Basic Information

Item Value
gene id G141470
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 5989895 ~ 5992227 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU190837
CCATTTCAAACAGAGATAAAATTTAGATCACCAACATCAGTAACAACCACACATTCAACATGACTAAACATTATAAAAGCATGTACCATTGTCTAAAATTCCGTTTATTCTAGTTGCCTTGGAATTTCAGTCCCAACAGTAGTACCAGTCAGCAGTACCAGCAGAACAATGTCAAGTTCCAAACTCACCACTgaactcttctttttttcccccacgcTCTGTCTCAGTGGCTGCTTCCTGCTGTCTGGGAGGAAAACTAAGTGGCGTGTGACTCTCAGTAGCACTGTGTTAAATTGCATAAGACAGACTTGACATTTCCATCTCATCTGGTACATCAGTCCACTTGCAGTACATATGCATGGCTAATATGTAAACAAGGCTGTGATGCAAATCTCAAAATGTCTTTGGTTCAATAGTCACAATCCACAATGCAGTCCATCCCCACTGGGCCCGCTGACAGCTGGGCCAATCACAGATATAGGAATAACTTCCAAACAGTACAACTCTGCCTttatgagaaaataaaaaaaaatatattttaaaacatcAAGTGTAGTTCAAATATTTGTAATAATATACTGAGAGGGCTGTTTTTGACAGCATCTCAGGATTATGTGAACATTTAGAGAGTGGAGCCAGAAAACAAAGGACAATTCTGTTTCGTTACAGCCTCTGTCGTCTGCGATAGTCACGGCCCTCAATCCTATTGGTTATGATAACGTAACTGAATATGATAAATAAGACCTAAATAATGATTTACACAAACTAagcctacaaaaaaaaaaaaaaaaaacttaaagagAATAACTATTTGAACACCACTTGTGCGGTCTTGACTGGAAACATGTTAACTTGGCTCCTGTGTGACACACCCGTTATATCGGTATGAACACACTTCAGTGAAGGAACCCACTTTCAGTTTGCTTTTCACCTGCACGCTGTGTGCTATTTTCCTTGTTTCATGTTACCACACACATAACCAATAGGAATAATGGCaaatgctgtttaaaaaaaacaaaaaacactgaattttactttaaaaagttgtattctaaatttttctGATTGTCATCAAATCTTATGTGCGGAACCAAACCAACAATAACTGTATCTACTatcaagtatgtgtgtgtgcagctagTTGTGCGTTCCATGTACCTCTGAACTCGGAGCTGGGAGTTATGTCATACCCGAGTTGACCCCGTTCCTTTAAAACAAGTTGGATTTTCACAGTGgggttagctctagccaggttagccattgttagcaataacagttgataacaacgcattacgctgcttttttgtgcatacaaacagcgtagcaacatgtccacagatagaagttgaacAGGAATGTGTGCACGGCTGGTTTAATGaaacacaaataagacagaagtgcaaATAAAATTATGTTACTACAGCTAtcactactgttgatgcacggagcagccatgtttGATATTGAAATCCGACTTCAGGGGGCGCATTTCCGACTTCTgggtacaaatggaacgcactaaaAGCCTGATAAGATCTTCTTCCTCTGAGCCtaagagctccattgttgtcaaaaactattaaaacccATCAGTAAgtcacactgttgcactgggtgacatgttccttcattaccatgaacacacacactgtggtatATTTGGATTCAGTTGCATatacaccgtcctgctgcaGGAGATAAACACTAGAACTGCAAAACTGGATTAATCTGCCGTTGAATATAGTCCCTAATAAATGCACTAATTCCTCATGTTTGAATAACAATTGTAGAAACTACAGTAGCCTgctgttttttgtgttgtttttttaaaatgaattataTCTGTATAGCCATTTTTAAACATGAACATCTTGGGCAGGAACCAATGGTCTTGGAGCTGAGTGTCACCGACGAAGTCAGACAGTTTTGCATGCGAGATGAACTAACACGTTGTTAGAGTGGGTCTTTTCATGAGAAttgatgaaaatacaaaaaacatgaaatagcATCAGACTCATCATTTAGGTGATGCCCCTTTTATCTAATTACCCAATTCCCCGACCTAGTCTCAGTCCACTTGCAGTGCGTGACTAACTTTAAAAATCTGAACACACAATCCCCCACTGCCACACACGTTTAAATATATCCCATTTCCTCTACCCCACGCTCTTATcatacacactgtacacacacagctaaAGGGCCGGTCAATGCAAGGATCTTCCATTCTTAACAGAGTCTCCTCCCTAGTTAAACACTGTACAGCTGACACCAGAGCCAAAGATACACAGAACCAACGCTGTCAGTCCAGGCATGTTCAATCCCAGATTGTG

Function

GO: NA

KEGG:

id description
ko00240 Pyrimidine metabolism
ko03020 RNA polymerase
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
TU190837 True 2333 lncRNA 0.40 1 5989895 5992227

Neighbor

gene id symbol gene type direction distance location
vgf NA coding downstream 22467 5959440 ~ 5967428 (-)
trnal-aag_6 NA coding downstream 32763 5957051 ~ 5957132 (-)
snapc2 NA coding downstream 34835 5946032 ~ 5955060 (-)
LOC120573619 NA coding downstream 68024 5901924 ~ 5921871 (-)
LOC120573667 NA coding downstream 124145 5841417 ~ 5865750 (-)
serpine1 serpine1 coding upstream 5891 5998118 ~ 6005218 (-)
trnas-uga_22 NA coding upstream 36614 6028841 ~ 6028922 (-)
trappc14 LOC104941436 coding upstream 166631 6158858 ~ 6185624 (-)
tm4sf21b NA coding upstream 245346 6237573 ~ 6243669 (-)
eif4a1a LOC107098142,LOC103365478,LOC100693841,LOC103148870,LOC102238331,LOC101477102 coding upstream 339461 6331688 ~ 6340737 (-)
G141468 NA non-coding downstream 18508 5970935 ~ 5971387 (-)
G141467 NA non-coding downstream 19282 5969951 ~ 5970613 (-)
G141416 NA non-coding downstream 278179 5711434 ~ 5711716 (-)
G141394 NA non-coding downstream 405369 5584162 ~ 5584526 (-)
G141259 NA non-coding downstream 781435 5208237 ~ 5208460 (-)
G141601 NA non-coding upstream 163825 6156052 ~ 6157413 (-)
G141612 NA non-coding upstream 273213 6265440 ~ 6266025 (-)
G141613 NA non-coding upstream 273924 6266151 ~ 6266583 (-)
G141667 NA non-coding upstream 463712 6455939 ~ 6511995 (-)
G141683 NA non-coding upstream 566071 6558298 ~ 6645212 (-)
G141439 NA other downstream 146749 5743559 ~ 5843146 (-)
G141400 NA other downstream 389433 5596958 ~ 5600462 (-)
cd99l2 cd99l2 other downstream 406900 5560026 ~ 5582995 (-)
nat16 nat16 other downstream 514740 5424561 ~ 5475155 (-)
G141234 NA other downstream 889813 5099705 ~ 5100082 (-)
gal3st4 gal3st4,LOC104939968 other upstream 185694 6177921 ~ 6220260 (-)
LOC120572220 NA other upstream 229744 6221971 ~ 6231297 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other upstream 316671 6308898 ~ 6315817 (-)
LOC120572256 NA other upstream 361237 6353464 ~ 6371100 (-)
tbc1d14 tbc1d14 other upstream 383745 6375972 ~ 6416457 (-)

Expression


Co-expression Network