LOC120572370


Basic Information

Item Value
gene id LOC120572370
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 8510393 ~ 8523919 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU191657
TCCTCTTAATGGTCATCATTGGTCTGGTTGTTAAAAACAGGAAACTTCAGAAAGCTGCCAATGAAGAACAGAATCCACAACAGCCTGAGAATCTGGACTCTGACCTGAAAGATGCAGCACTGAGTTTGTATGCAGCAACAATAAGGAAGAGGAGGCCTGCATCAGAGAGAGAAGTGGAGACTCATGCTGTTTATGCTGTCTGCAGATAGACTCAGAGTGGAACTGATGCTTTATCATATTCATCTCCTGCTGTCTTCTTTTGTGGGTGAATGGAGAGGAGTtcaccttttcttttaaaaaaaagagtaaaataaaaC
>XM_039821658.1
GAACAAAAGACTCCACCTCTGAAgttgagagcagccttcctggagcACAGTTAGACATCACAGAGCTGTGATCATACGCACCACGATGAAACGGAGCCTGATAACAGCTTTAATTCTCTGCAGCATCAgcTGGATCTCTGTCTCAGGTTCTGAGTCTCACACTGAGACTGTGGAGGGTCGGCCGGGTGGAGAAGTCACACTCACATGCTCTAACCCGTCCAACCGAGACGCTCTAACACTCTGGTTGAGAGTGGTCAACAGAACCAAGGCCAGCTGGATCTCCACGATGACCAGGTCTACAGGAAAACCTTTATACAGAGATGGAATTAAAAATGGAAGATTCAACATGAGTACCAACATCTCCACTCTCTTTCTCCAAATCAAACATGTGGATGTATCTGACTCTGGACTGTATTTATGTGGATTTTACATTGAAGGACGTTATAATTTCAGCGCGATACACTTCAATGTTAAAGACAGTGATGATTCTCATGATGACGCTGACAGGAAGTCTGAAAGCAGCGATGAATCTCATGAGGACAGGAAGTGTGAAACAGAGTCTGATGGAACAGCAAAGCTGATGAGTTTGATCCTGGGAGCTCTGACTGTTCTCCTCTTAATGGTCATCATTGGTCTGGTTGTTAAAAACAGGAAACTTCAGAAAGCTGCCAATGAAGAACAGAATCCACAACAGCCTGAGAATCTGGACTCTGACCTGAAAGATGCAGCACTGAGTTTGTATGCAGCAACAATAAGGAAGAGGAGGCCTGCATCAGAGAGAGAAGTGGAGACTCATGCTGTTTATGCTGTCTGCAGATAGACTCAGAGTGGAACTGATGCTTTATCATATTCATCTCCTGCTGTCTTCTTTTGTGGGTGAATGGAGAGGAGTtcaccttttcttttaaaaaaaagagtaaaataaaaCCACTAAGCTTTTAAtctca
>XM_039821660.1
GAACAAAAGACTCCACCTCTGAAgttgagagcagccttcctggagcACAGTTAGACATCACAGAGCTGTGATCATACGCACCACGATGAAACGGAGCCTGATAACAGCTTTAATTCTCTGCAGCATCAgcTGGATCTCTGTCTCAGGTTCTGAGTCTCACACTGAGACTGTGGAGGGTCGGCCGGGTGGAGAAGTCACACTCACATGCTCTAACCCGTCCAACCGAGACGCTCTAACACTCTGGTTGAGAGTGGTCAACAGAACCAAGGCCAGCTGGATCTCCACGATGACCAGGTCTACAGGAAAACCTTTATACAGAGATGGAATTAAAAATGGAAGATTCAACATGAGTACCAACATCTCCACTCTCTTTCTCCAAATCAAACATGTGGATGTATCTGACTCTGGACTGTATTTATGTGGATTTTACATTGAAGGACGTTATAATTTCAGCGCGATACACTTCAATGTTAAAGACAGTGATGATTCTCATGATGACGCTGACAGGAAGTCTGAAAGCAGCGATGAATCTCATGAGGACAGGAAGTGTGAAAAGTCTGATGGAACAGCAAAGCTGATGAGTTTGATCCTGGGAGCTCTGACTGTTCTCCTCTTAATGGTCATCATTGGTCTGGTTGTTAAAAACAGGAAACTTCAGAAAGCTGCCAATGAAGAACAGAATCCACAACAGCCTGAGAATCTGGACTCTGACCTGAAAGATGCAGCACTGAGTTTGTATGCAGCAACAATAAGGAAGAGGAGGCCTGCATCAGAGAGAGAAGTGGAGACTCATGCTGTTTATGCTGTCTGCAGATAGACTCAGAGTGGAACTGATGCTTTATCATATTCATCTCCTGCTGTCTTCTTTTGTGGGTGAATGGAGAGGAGTtcaccttttcttttaaaaaaaagagtaaaataaaaCCACTAAGCTTTTAAtctca
>XM_039821661.1
GAACAAAAGACTCCACCTCTGAAgttgagagcagccttcctggagcACAGTTAGACATCACAGAGCTGTGATCATACGCACCACGATGAAACGGAGCCTGATAACAGCTTTAATTCTCTGCAGCATCAgcTGGATCTCTGTCTCAGGTTCTGAGTCTCACACTGAGACTGTGGAGGGTCGGCCGGGTGGAGAAGTCACACTCACATGCTCTAACCCGTCCAACCGAGACGCTCTAACACTCTGGTTGAGAGTGGTCAACAGAACCAAGGCCAGCTGGATCTCCACGATGACCAGGTCTACAGGAAAACCTTTATACAGAGATGGAATTAAAAATGGAAGATTCAACATGAGTACCAACATCTCCACTCTCTTTCTCCAAATCAAACATGTGGATGTATCTGACTCTGGACTGTATTTATGTGGATTTTACATTGAAGGACGTTATAATTTCAGCGCGATACACTTCAATGTTAAAGACAGTGATGATTCTCATGATGACGCTGACAGGAAGTCTGAAACAGAGTCTGATGGAACAGCAAAGCTGATGAGTTTGATCCTGGGAGCTCTGACTGTTCTCCTCTTAATGGTCATCATTGGTCTGGTTGTTAAAAACAGGAAACTTCAGAAAGCTGCCAATGAAGAACAGAATCCACAACAGCCTGAGAATCTGGACTCTGACCTGAAAGATGCAGCACTGAGTTTGTATGCAGCAACAATAAGGAAGAGGAGGCCTGCATCAGAGAGAGAAGTGGAGACTCATGCTGTTTATGCTGTCTGCAGATAGACTCAGAGTGGAACTGATGCTTTATCATATTCATCTCCTGCTGTCTTCTTTTGTGGGTGAATGGAGAGGAGTtcaccttttcttttaaaaaaaagagtaaaataaaaCCACTAAGCTTTTAAtctca
>XM_039821662.1
GAACAAAAGACTCCACCTCTGAAgttgagagcagccttcctggagcACAGTTAGACATCACAGAGCTGTGATCATACGCACCACGATGAAACGGAGCCTGATAACAGCTTTAATTCTCTGCAGCATCAgcTGGATCTCTGTCTCAGGTTCTGAGTCTCACACTGAGACTGTGGAGGGTCGGCCGGGTGGAGAAGTCACACTCACATGCTCTAACCCGTCCAACCGAGACGCTCTAACACTCTGGTTGAGAGTGGTCAACAGAACCAAGGCCAGCTGGATCTCCACGATGACCAGGTCTACAGGAAAACCTTTATACAGAGATGGAATTAAAAATGGAAGATTCAACATGAGTACCAACATCTCCACTCTCTTTCTCCAAATCAAACATGTGGATGTATCTGACTCTGGACTGTATTTATGTGGATTTTACATTGAAGGACGTTATAATTTCAGCGCGATACACTTCAATGTTAAAGGCAGCGATGAATCTCATGAGGACAGGAAGTGTGAAACAGAGTCTGATGGAACAGCAAAGCTGATGAGTTTGATCCTGGGAGCTCTGACTGTTCTCCTCTTAATGGTCATCATTGGTCTGGTTGTTAAAAACAGGAAACTTCAGAAAGCTGCCAATGAAGAACAGAATCCACAACAGCCTGAGAATCTGGACTCTGACCTGAAAGATGCAGCACTGAGTTTGTATGCAGCAACAATAAGGAAGAGGAGGCCTGCATCAGAGAGAGAAGTGGAGACTCATGCTGTTTATGCTGTCTGCAGATAGACTCAGAGTGGAACTGATGCTTTATCATATTCATCTCCTGCTGTCTTCTTTTGTGGGTGAATGGAGAGGAGTtcaccttttcttttaaaaaaaagagtaaaataaaaCCACTAAGCTTTTAAtctca
>XM_039821663.1
GAACAAAAGACTCCACCTCTGAAgttgagagcagccttcctggagcACAGTTAGACATCACAGAGCTGTGATCATACGCACCACGATGAAACGGAGCCTGATAACAGCTTTAATTCTCTGCAGCATCAgcTGGATCTCTGTCTCAGGTTCTGAGTCTCACACTGAGACTGTGGAGGGTCGGCCGGGTGGAGAAGTCACACTCACATGCTCTAACCCGTCCAACCGAGACGCTCTAACACTCTGGTTGAGAGTGGTCAACAGAACCAAGGCCAGCTGGATCTCCACGATGACCAGGTCTACAGGAAAACCTTTATACAGAGATGGAATTAAAAATGGAAGATTCAACATGAGTACCAACATCTCCACTCTCTTTCTCCAAATCAAACATGTGGATGTATCTGACTCTGGACTGTATTTATGTGGATTTTACATTGAAGGACGTTATAATTTCAGCGCGATACACTTCAATGTTAAAGGCAGCGATGAATCTCATGAGGACAGGAAGTGTGAAAAGTCTGATGGAACAGCAAAGCTGATGAGTTTGATCCTGGGAGCTCTGACTGTTCTCCTCTTAATGGTCATCATTGGTCTGGTTGTTAAAAACAGGAAACTTCAGAAAGCTGCCAATGAAGAACAGAATCCACAACAGCCTGAGAATCTGGACTCTGACCTGAAAGATGCAGCACTGAGTTTGTATGCAGCAACAATAAGGAAGAGGAGGCCTGCATCAGAGAGAGAAGTGGAGACTCATGCTGTTTATGCTGTCTGCAGATAGACTCAGAGTGGAACTGATGCTTTATCATATTCATCTCCTGCTGTCTTCTTTTGTGGGTGAATGGAGAGGAGTtcaccttttcttttaaaaaaaagagtaaaataaaaCCACTAAGCTTTTAAtctca
>XM_039821664.1
GAACAAAAGACTCCACCTCTGAAgttgagagcagccttcctggagcACAGTTAGACATCACAGAGCTGTGATCATACGCACCACGATGAAACGGAGCCTGATAACAGCTTTAATTCTCTGCAGCATCAgcTGGATCTCTGTCTCAGGTTCTGAGTCTCACACTGAGACTGTGGAGGGTCGGCCGGGTGGAGAAGTCACACTCACATGCTCTAACCCGTCCAACCGAGACGCTCTAACACTCTGGTTGAGAGTGGTCAACAGAACCAAGGCCAGCTGGATCTCCACGATGACCAGGTCTACAGGAAAACCTTTATACAGAGATGGAATTAAAAATGGAAGATTCAACATGAGTACCAACATCTCCACTCTCTTTCTCCAAATCAAACATGTGGATGTATCTGACTCTGGACTGTATTTATGTGGATTTTACATTGAAGGACGTTATAATTTCAGCGCGATACACTTCAATGTTAAAGAGTCTGATGGAACAGCAAAGCTGATGAGTTTGATCCTGGGAGCTCTGACTGTTCTCCTCTTAATGGTCATCATTGGTCTGGTTGTTAAAAACAGGAAACTTCAGAAAGCTGCCAATGAAGAACAGAATCCACAACAGCCTGAGAATCTGGACTCTGACCTGAAAGATGCAGCACTGAGTTTGTATGCAGCAACAATAAGGAAGAGGAGGCCTGCATCAGAGAGAGAAGTGGAGACTCATGCTGTTTATGCTGTCTGCAGATAGACTCAGAGTGGAACTGATGCTTTATCATATTCATCTCCTGCTGTCTTCTTTTGTGGGTGAATGGAGAGGAGTtcaccttttcttttaaaaaaaagagtaaaataaaaCCACTAAGCTTTTAAtctca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191657 False 317 lncRNA 0.41 3 8510412 8523919
XM_039821658.1 True 947 mRNA 0.44 7 8510393 8513147
XM_039821660.1 False 944 mRNA 0.44 7 8510393 8513147
XM_039821661.1 False 911 mRNA 0.44 6 8510393 8513147
XM_039821662.1 False 905 mRNA 0.44 6 8510393 8513147
XM_039821663.1 False 902 mRNA 0.44 6 8510393 8513147
XM_039821664.1 False 866 mRNA 0.44 5 8510393 8513147

Neighbor

gene id symbol gene type direction distance location
LOC120572372 NA coding downstream 3158 8505051 ~ 8507235 (-)
LOC120572375 NA coding downstream 169675 8337627 ~ 8340718 (-)
LOC120572386 NA coding downstream 178071 8330042 ~ 8332322 (-)
LOC120572383 NA coding downstream 243783 8263065 ~ 8266610 (-)
LOC120572396 NA coding downstream 292010 8216609 ~ 8218383 (-)
LOC120573552 NA coding upstream 208057 8731976 ~ 8743541 (-)
LOC120573555 NA coding upstream 258294 8782213 ~ 8784307 (-)
LOC120573556 NA coding upstream 263872 8787791 ~ 8798859 (-)
LOC120573557 NA coding upstream 284712 8808631 ~ 8809792 (-)
LOC120572414 NA coding upstream 287172 8811091 ~ 8812650 (-)
LOC120572406 NA non-coding downstream 13871 8452892 ~ 8496522 (-)
LOC120572411 NA non-coding downstream 52086 8457772 ~ 8458307 (-)
G142072 NA non-coding downstream 162461 8347541 ~ 8347932 (-)
LOC120572402 NA non-coding downstream 212336 8296962 ~ 8298057 (-)
LOC120572405 NA non-coding downstream 251573 8257532 ~ 8258820 (-)
LOC120572413 NA non-coding upstream 39921 8563840 ~ 8566357 (-)
LOC120572407 NA non-coding upstream 72759 8596678 ~ 8601588 (-)
G142128 NA non-coding upstream 284751 8808670 ~ 8816061 (-)
G142131 NA non-coding upstream 296439 8820358 ~ 8820678 (-)
G142143 NA non-coding upstream 347168 8871087 ~ 8899675 (-)
G142077 NA other downstream 44781 8465082 ~ 8465612 (-)
LOC120573543 NA other downstream 175019 8332365 ~ 8335374 (-)
LOC120572400 NA other downstream 397709 8107647 ~ 8112684 (-)
G141913 NA other downstream 522952 7935230 ~ 7987441 (-)
LOC120573451 NA other downstream 572903 7840921 ~ 7937490 (-)
LOC120572236 LOC102083041 other upstream 509028 9032947 ~ 9105231 (-)
G142173 NA other upstream 574822 9098741 ~ 9100414 (-)
chrnb1l LOC101463714,LOC102292928,LOC102798105 other upstream 606724 9130643 ~ 9153933 (-)
tmem256 tmem256,LOC103358394 other upstream 933931 9457850 ~ 9465779 (-)
si:dkey-183c6.7 LOC103364800,LOC108242893,LOC102223112,LOC106525003,LOC106907808,LOC106948277,LOC103480784,LOC103131169 other upstream 2107556 10631475 ~ 10657973 (-)

Expression


Co-expression Network