G142744


Basic Information

Item Value
gene id G142744
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 11409918 ~ 11433847 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU192553
TTTTAATCATTATAAATCATTCTATAAATACATTGTTGTCATATCATTAAGAACTTGTTTTAAATAGCAATagataacaaacaaacaagcagtCGGGTGGTTGGTTGCTGGGGTCAGGCACGGTTCAACACAATCTTCTGGGTCTTGAGGTGACAAAACCGTAACCGTTAGTGGaagtagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgag
>TU192554
TTTTAATCATTATAAATCATTCTATAAATACATTGTTGTCATATCATTAAGAACTTGTTTTAAATAGCAATagataacaaacaaacaagcagtCGGGTGGTTGGTTGCTGGGGTCAGGCACGGTTCAACACAATCTTCTGGGTCTTGAGGTGACAAAACCGTAACCGTTAGTGGaagtagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggcttcagAGTACTTATTGCAGGAGAAAGCCAAACCAAACAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU192553 False 229 lncRNA 0.40 2 11410755 11433847
TU192554 True 280 lncRNA 0.41 2 11409918 11433847

Neighbor

gene id symbol gene type direction distance location
plcb3 plcb3 coding downstream 22121 11332356 ~ 11387797 (-)
badb NA coding downstream 227231 11175563 ~ 11182687 (-)
LOC120572301 NA coding downstream 242627 11158223 ~ 11167291 (-)
arl2 arl2 coding downstream 329845 11077474 ~ 11080073 (-)
rcor2 rcor2 coding downstream 376318 11019382 ~ 11033600 (-)
tmem179ba tmem179b coding upstream 11765 11445612 ~ 11452877 (-)
snx15 snx15 coding upstream 40947 11474794 ~ 11481606 (-)
trnal-aag_8 NA coding upstream 41415 11475262 ~ 11475343 (-)
trnal-aag_9 NA coding upstream 44270 11478117 ~ 11478198 (-)
trnam-cau_43 NA coding upstream 50638 11484485 ~ 11484556 (-)
G142739 NA non-coding downstream 78417 11330027 ~ 11331501 (-)
G142730 LOC104948199,LOC104959015,LOC103360918 non-coding downstream 236928 11167889 ~ 11172990 (-)
G142668 NA non-coding downstream 356212 11001436 ~ 11053706 (-)
G142690 NA non-coding downstream 416117 10938475 ~ 10993801 (-)
G142687 paip2b non-coding downstream 473747 10907927 ~ 10936171 (-)
LOC120573191 NA non-coding upstream 5457 11439304 ~ 11439836 (-)
G142751 NA non-coding upstream 7834 11441681 ~ 11447511 (-)
G142758 slc3a2 non-coding upstream 56567 11490414 ~ 11539518 (-)
G142766 LOC103363230 non-coding upstream 119939 11553786 ~ 11562932 (-)
G142790 NA non-coding upstream 408420 11842267 ~ 11856354 (-)
gpha2 gpha2 other downstream 255389 11149851 ~ 11154529 (-)
G142669 NA other downstream 265180 10930022 ~ 11144738 (-)
si:dkey-183c6.7 LOC103364800,LOC108242893,LOC102223112,LOC106525003,LOC106907808,LOC106948277,LOC103480784,LOC103131169 other downstream 751945 10631475 ~ 10657973 (-)
tmem256 tmem256,LOC103358394 other downstream 1944139 9457850 ~ 9465779 (-)
chrnb1l LOC101463714,LOC102292928,LOC102798105 other downstream 2255985 9130643 ~ 9153933 (-)
G142745 NA other upstream 8114 11441961 ~ 11443939 (-)
prox3 LOC104947722,LOC103363229 other upstream 21168 11455015 ~ 11467019 (-)
LOC120573414 LOC104960590,LOC106514884,LOC103390236,LOC107084127,LOC106908847,LOC101464045,LOC100704366,LOC102310755,LOC102193047,LOC102788271,LOC103369314,LOC103129513 other upstream 476604 11910451 ~ 11935773 (-)
LOC120573137 ppp3ca,LOC103369319 other upstream 561067 11994914 ~ 12063426 (-)
G142916 NA other upstream 979907 12413754 ~ 12415155 (-)

Expression


Co-expression Network