G148249


Basic Information

Item Value
gene id G148249
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 31265761 ~ 31267912 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU200442
TCAGGTGAGACATAAAGAGACCTTCTGCAGGGACACACTTGAGAAGGCcttttaaataacattaattattatttattaatgtgttttttattgtttagtCGATGTGGTAACAGTGCACCCTGGAGAGGATGTCACTCTGCCATATGTGGCTGCGGACCTCCCTGTCAGAGCTGTAGAGTGGACCAGACCTGATCTGGAGCCAGATAATGTCCTCTTTTGCAGAGATGGACACTTGGAAACAGAAGACCAGCATCCATCCTTTAAGGACAGGGTggagctggtggacagagatCTGAAGGACGGAGACGTGTCTTTAATTCTGAAGAATGTGAACATCAACGACCAAGGAACATACGAGTGTCGAGTTGAACCAGCTGATTTCACACGTAAAAAGAGAGCCATCATTGACTCTGAGCCAATCAGAACCATCCGTCTGCAGGTTCCAGAGCCAGACCTGATAGTGGTAACAGTGCACCCTGGAGATGATGTCACTCTGCCATGTCAGGCTGCTGATATCTCCATCAGAGCTGTAGAGTGGACCAGATCTGACCTGGAGCCAGACTACGTCCTCTATTACAGCGATGGATACCTGGATCCAACCCGCCAGCATCCATCCTTTAAGGACAGGGTGGACCTGGTGGACAGAGATCTGAAGGACGGAGACGTGTCTTTAACTCTGAAGAATGTGAGCAGCATCGACCAAGGAATATACGGGTGTCGAGTTGCATCAGCTGGTTTCAGACGTAGAAGAGAGCCTTCATCGACTctgagccaatcagaatcatccGTCTGCAGGTTAGAGACCCAGCAGGTCCAAACAGTGAAAACTCTGTCGATGAAAACTACATGGATGAAAATACAATGTATGATGATCCAAATGATAACTTGCCTCGTGGATACTTTGGATTGTCAGGTTTTGCAGCGCCTCTTTTAACAGTTGTTTTAACTGTTGTAGTGGGTGTTTGCCTGAAATATAAAAGACGTAAGGACAGGAGATCAAGATCTGCCGCTGATGACGTTCAGGTCATCTGACTAGTCATTGGGCGGTTTACACCTGACTGTTTTCACACTCATCGTTTATTCCACACTCTTCTTTCTCTGGGGGTGAGGTCATGTTTAAATCTGCTGTTTGATCTGTTTCAACCATTTTCTCTGCTCCAGGAATCCCACACTTTTTTCATGTAGAAGTActgttacttttaaaaatattaatagTTACTCCCCTCTGTGAATCTCTACCTGGTGGAGGAGTCTGTGTATCTGAATCTGAGATCTGTATTATCTGGAGCTCTGAGATCCTGTAGGGTCTCCTATGATGAGTGGGTCCCAGAGGAGGGTCAGACTAAGAGAGAATCACTTCAAAAGTCTACCTTTAGAGGAACTAAAATAGTTTACTCGAGTAAGAAACTCCTGTGGCTTATCTAAAAGTACTCACTTTATATGAATATTTCTcatgtgaaaacaaaattactTAGTTGATATTGTGTAAAGATGTACTCATGTACTCAGATAAAAGTCAAAATTGGTTTGAATGAAGCAGCTTACACAGTTTGGCAGTAGGTGTTGTATAGCTTATTTTAACAGTTGCGGTGTTTGTTTGCTGAACATGTATTGTATAGCATGTATAGAAAAGTATGGGCAACAATTCAGAGTCCCCTGTTGCTGATGATCAAAGCGTTTAACTACTGCAGTGTTATTACAAAGTTTATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200442 True 1711 lncRNA 0.43 3 31265761 31267912

Neighbor

gene id symbol gene type direction distance location
LOC120572887 NA coding downstream 11522 31245793 ~ 31254239 (-)
LOC120572825 NA coding downstream 42994 31220588 ~ 31222767 (-)
LOC120572930 NA coding downstream 139511 31109431 ~ 31126250 (-)
LOC120572931 NA coding downstream 296471 30966809 ~ 30969290 (-)
LOC120572837 NA coding downstream 587079 30629309 ~ 30678682 (-)
LOC120572747 NA coding upstream 167903 31435815 ~ 31623813 (-)
LOC120572776 NA coding upstream 238671 31506583 ~ 31551558 (-)
LOC120572803 NA coding upstream 1113841 32381753 ~ 32419579 (-)
LOC120572804 NA coding upstream 1172736 32440648 ~ 32448330 (-)
LOC120572800 NA coding upstream 1208814 32476726 ~ 32486353 (-)
G148241 NA non-coding downstream 13773 31207168 ~ 31251988 (-)
LOC120572992 NA non-coding downstream 54148 31207134 ~ 31211613 (-)
G148230 NA non-coding downstream 89732 31175715 ~ 31176029 (-)
LOC120572966 NA non-coding downstream 116999 31145329 ~ 31148762 (-)
G148214 NA non-coding downstream 132127 31106954 ~ 31133634 (-)
LOC120573059 NA non-coding upstream 27441 31295353 ~ 31297183 (-)
G148286 NA non-coding upstream 101023 31368935 ~ 31378564 (-)
G148287 NA non-coding upstream 105634 31373546 ~ 31375056 (-)
G148295 NA non-coding upstream 134751 31402663 ~ 31403514 (-)
G148299 NA non-coding upstream 146837 31414749 ~ 31416827 (-)
LOC120572919 NA other downstream 209376 31046646 ~ 31056385 (-)
LOC120572909 NA other downstream 398371 30800809 ~ 30867390 (-)
LOC120572603 NA other downstream 434431 30829613 ~ 30831330 (-)
LOC120572891 NA other downstream 755735 30497065 ~ 30510026 (-)
LOC120572884 NA other downstream 790878 30470495 ~ 30474883 (-)
LOC120572802 NA other upstream 10065 31277977 ~ 31673624 (-)
G148246 NA other upstream 161016 31428928 ~ 31737682 (-)
LOC120572607 NA other upstream 864424 32132336 ~ 32375549 (-)
LOC120572814 NA other upstream 1335586 32603498 ~ 32811604 (-)
G148453 NA other upstream 1384644 32652556 ~ 32700405 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030527 upk3b coding NC_007116.7 CM002889.2 59252701 ~ 59264707 (+)