LOC120572655


Basic Information

Item Value
gene id LOC120572655
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38561269 ~ 38635593 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU203219
GGGGCGGCTGCAGGGTGACATGTCCTACAGCCTGCTGTGGTACAACTGTGAACACTACGTCATGTACTGCCGCTACGGCACGGTCGCCAGCTTCCAGACCTTCCAGTTCTGTAAGACAGCGAGGAAGCTGTTGCTGAGTCGGCGTGTTGCCAAGGCGACAGCGGCGCTCTGCGCGTGCCTGCTCCTGTTCCTCGACGCCGTGACCGCGTGCAACGCCACGCTCGCCGTTCTGCTGCCTTTTCTCATCTGGATGGCCGCATAAAAACCACTTAAAACACCGGGAGAAATGCAAATTAAGTTCTCTTTGGAGGTCTGCTGTCTAAAACATGCGAATAATATGTAAAAATGAGGCTAATAAAGATTGTATTTTTGAaaaaaaaaaaaaaaagtatgatttATGAGCCATTggaaggcttttattgtgaaaatatgTGTGCAGGAAGT
>TU203220
CTCCAGTATTTATTATACAGTAAACGTGTATGTGTTGTCTTCAGCGTGGCAGCGTGCGGGTGGACTCAGTGGAGGACTTCGCCTACGGATCGGAGATCCTCATCAACACGATGGACAAGTTCTGTAAGACAGCGAGGAAGCTGTTGCTGAGTCGGCGTGTTGCCAAGGCGACAGCGGCGCTCTGCGCGTGCCTGCTCCTGTTCCTCGACGCCGTGACCGCGTGCAACGCCACGCTCGCCGTTCTGCTGCCTTTTCTCATCTGGATGGCCGCATAAAAACCACTTAAAACACCGGGAGAAATGCAAATTAAGTTCTCTTTGGAGGTCTGCTGTCTAAAACATGCGAATAATATGTAAAAATGAGGCTAATAAAGATTGTATTTTTGAGTTTTTGTGGTGTTTTCAAGCTTCCAGTGTTTGGACCATAGGAACTACAATTATAAACTACATTTCCCTATGTGTACTTGCATGACAAGTGTTTATAAACTCTGGGAAAACATTTGTCCTGATGAAAAGCTTTCTTTTATCATTAAAAATTtgcatttatttcattatttttagttcatattttgcacgttttatttatcttattctattttaattttaatatttcttaattttatgttttatatttcttatttttaagtttgttgTTTAAT
>XM_039821973.1
CAGTAAACGTGTATGTGTTGTCTTCAGCGTGGCAGCGTGCGGGTGGACTCAGTGGAGGACTTCGCCTACGGATCGGAGATCCTCATCAACACGATGGACAAGGTGTGTAACGTCGCGGCAGTAATCGATTACTCTGCGTGCAGTAATCGGTTACTCTGCGTGCAGGGGCGGCTGCAGGGTGACATGTCCTACAGCCTGCTGTGGTACAACTGTGAACACTACGTCATGTACTGCCGCTACGGCACGGTCGCCAGCTTCCAGACCTTCCAGTTCTGTAAGACAGCGAGGAAGCTGTTGCTGAGTCGGCGTGTTGCCAAGGCGACAGCGGCGCTCTGCGCGTGCCTGCTCCTGTTCCTCGACGCCGTGACCGCGTGCAACGCCACGCTCGCCGTTCTGCTGCCTTTTCTCATCTGGATGGCCGCATAAAAACCACTTAAAACACCGGGAGAAATGCAAATTAAGTTCTCTTTGGAGGTCTGCTGTCTAAAACATGCGAATAATATGTAAAAATGAGGCTAATAAAGATTGTATTTTTGAGTTTT

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction
ko04740 Olfactory transduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU203219 False 444 TUCP 0.49 3 38561269 38633052
TU203220 True 658 TUCP 0.39 2 38627757 38635593
XM_039821973.1 False 542 mRNA 0.53 5 38628024 38635576

Neighbor

gene id symbol gene type direction distance location
LOC120573391 LOC106532721,LOC108250468 coding downstream 73900 38475763 ~ 38487369 (-)
LOC120573402 NA coding downstream 222510 38285892 ~ 38338759 (-)
LOC120573407 NA coding downstream 358925 38199809 ~ 38202344 (-)
LOC120573396 NA coding downstream 529167 38027935 ~ 38032102 (-)
LOC120573400 NA coding downstream 550694 38007345 ~ 38010575 (-)
LOC120572225 LOC104940940 coding upstream 99591 38735184 ~ 38743390 (-)
cfi NA coding upstream 157969 38793562 ~ 38816682 (-)
LOC120572318 LOC103365258,LOC100696033,LOC101477093,LOC102302035 coding upstream 192967 38828560 ~ 38866782 (-)
LOC120572656 NA coding upstream 246645 38882238 ~ 38889171 (-)
LOC120572319 LOC102301736,LOC102790445,LOC102077377 coding upstream 253302 38888895 ~ 38899886 (-)
G150170 NA non-coding downstream 59887 38497665 ~ 38501382 (-)
LOC120573413 NA non-coding downstream 67641 38491947 ~ 38493628 (-)
G150057 NA non-coding downstream 103675 38455011 ~ 38457594 (-)
LOC120573412 NA non-coding downstream 169605 38388610 ~ 38391664 (-)
G149996 NA non-coding downstream 204233 38352481 ~ 38357036 (-)
G150202 NA non-coding upstream 43512 38679105 ~ 38679480 (-)
G150193 NA non-coding upstream 54595 38690188 ~ 38691776 (-)
G150194 NA non-coding upstream 56252 38691845 ~ 38694836 (-)
G150203 NA non-coding upstream 64234 38699827 ~ 38700520 (-)
G150191 NA non-coding upstream 67633 38703226 ~ 39064722 (-)
LOC120572653 LOC102793922,LOC108250468,LOC103389793,LOC103129600,LOC106908923,LOC101466812,LOC106943038 other downstream 20099 38487094 ~ 38541170 (-)
G150174 NA other downstream 27969 38528917 ~ 38533300 (-)
G150012 NA other downstream 283022 38246640 ~ 38278247 (-)
LOC120573395 NA other downstream 381789 38155598 ~ 38179480 (-)
LOC120572652 NA other downstream 597521 37960642 ~ 37963748 (-)
lratb.1 LOC101070953,LOC108248302,LOC106910222,LOC103149051,LOC103367949,LOC106949946,LOC107082284 other upstream 8973 38644566 ~ 38671813 (-)

Expression


Co-expression Network