G150232


Basic Information

Item Value
gene id G150232
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38777613 ~ 38826725 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU203282
TGACAGAAGTCACGTAGAAAGATATTGAAACACAGAGTTTATGCTTTATATTTTCATTACtttgccttttttctttttttctaataatCTGTCATGCcacatgtgcacacaaaacgtgcacacttAATCACAGCCTTCTCACCAACCGTGgcttatacaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaaacacacacacaggcgcgcacAATACAATACACCCATTCCAAGCTTGAACATACAttgaacagagaaacacacaacgGCTGTAAACGCACACATTTAGCAGCAATATAGAAAAACTCTGTGCTGTTAGTCAACGTCTCCGTCAGTCTGTCAGTCAGTGTCTGTCCGTGTTCAATAGTTTAAACTGTAGTTCTTTGATTTCTCCGAGGCAGAGCAGCTTTCGAGGCAGTCATCCTCTCTTTTCCGGGACTGTCAACAGAGTTGAGAGTGAGATCTTTGAAACACAATGGATCAAAAGACTGTGGCATGTTTTAAAGTCATGTAAAGCCTCTAGTGTCTCCAGAGGGAGCTTTGGGAAGTCTTAAAACTGCCTTCAAGTAATAACACTTGAGTCAGCGTCGGTTGAAGGctacaagtttaaaaaaaaagtgaacaaaTGCGGAGGTGTGAAGTCAGAAAGAAGCGAGTTTACCGCTGATCATCTCGGGTGGAGCCTACGTTAGCTGCTCCTAGCACAACACACCACAATCTAGCGCCTAACTCTTGTTGGtttgagttgcattgtgggaagtGGCTATTTATATAGTTTTATATGAGGTGTGTGTGGCcctttttacacagaaatggatcaCAAAGTATCTAGATTtattttaaaggtgctgtaggtatgattgtgaagatccaggacttagctaaaaaatttgaacatcgacaacttctcagtcgctccctcccctttc

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process

KEGG:

id description
ko00830 Retinol metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU203282 True 983 lncRNA 0.42 2 38777613 38826725

Neighbor

gene id symbol gene type direction distance location
LOC120572225 LOC104940940 coding downstream 34223 38735184 ~ 38743390 (-)
LOC120572654 rbm46,LOC102795526 coding downstream 150309 38606289 ~ 38627304 (-)
LOC120573401 NA coding downstream 211964 38561962 ~ 38565649 (-)
LOC120573391 LOC106532721,LOC108250468 coding downstream 290244 38475763 ~ 38487369 (-)
LOC120573402 NA coding downstream 438854 38285892 ~ 38338759 (-)
LOC120572318 LOC103365258,LOC100696033,LOC101477093,LOC102302035 coding upstream 1835 38828560 ~ 38866782 (-)
LOC120572656 NA coding upstream 55513 38882238 ~ 38889171 (-)
LOC120572319 LOC102301736,LOC102790445,LOC102077377 coding upstream 62170 38888895 ~ 38899886 (-)
wdr55 wdr55 coding upstream 78127 38904852 ~ 38914929 (-)
LOC120573427 elk1,LOC103365590 coding upstream 287720 39114445 ~ 39124082 (-)
G150203 NA non-coding downstream 77093 38699827 ~ 38700520 (-)
G150194 NA non-coding downstream 82777 38691845 ~ 38694836 (-)
G150193 NA non-coding downstream 85837 38690188 ~ 38691776 (-)
G150202 NA non-coding downstream 98133 38679105 ~ 38679480 (-)
G150196 NA non-coding downstream 164558 38612247 ~ 38613055 (-)
G150230 NA non-coding upstream 20933 38847658 ~ 38874828 (-)
G150242 NA non-coding upstream 25623 38852348 ~ 38852864 (-)
G150231 NA non-coding upstream 31864 38858589 ~ 38907078 (-)
G150246 NA non-coding upstream 60074 38886799 ~ 38887329 (-)
G150251 NA non-coding upstream 108662 38935387 ~ 38936032 (-)
G150192 NA other downstream 88020 38611655 ~ 38689593 (-)
lratb.1 LOC101070953,LOC108248302,LOC106910222,LOC103149051,LOC103367949,LOC106949946,LOC107082284 other downstream 105800 38644566 ~ 38671813 (-)
LOC120572655 NA other downstream 142020 38561269 ~ 38635593 (-)
LOC120572653 LOC102793922,LOC108250468,LOC103389793,LOC103129600,LOC106908923,LOC101466812,LOC106943038 other downstream 236443 38487094 ~ 38541170 (-)
G150174 NA other downstream 244313 38528917 ~ 38533300 (-)

Expression


Co-expression Network