men1 (men1)


Basic Information

Item Value
gene id men1
gene name men1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 4435605 ~ 4447350 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821429.1
CTCGGTTCCGCACCTTCACGCAACGTCCGAGCACTGACAGATAAGCGAGACGGAGGGAAACAAGGCGGACTATGGAGGAGGGGAAAAACATGTCAGGCCATCTATCACATAATGGCATCATGAAGCCCTCTACTGGTGAAGTTTACGAATGACATACTATGAACTACATTTCCCAGCATACATTAGAGGAAACCGTGTGTGCAGTGCTTTAGATCTTTATCCATGGGGATGGGCCTTTCGGCGTTCAACTGTGCTTGACAGCGAGCGAAGTATCGTTATGAGATCTGCTTCGTGACGCAAACGTAGAGACTGGTGACACACTGCAAGTGACTTTTGGGAAGACTGAACTGCGCGGCAAAAGAAGGgggacacaaacaaaaacatgtggCTGAGGCTGTGAGAAAACGGTATTGCAGGTGAGGAGAGCATCTGAGTTGACTGACAGTGGACATCATGGGTTTGCACTCAGCCCAGAAGAAACACTTTCCCCTGCGGGGGATCGACGGTGTGGTTCAGCTGTTTGATGCTGAGCTCCGCAAGTCTGAGCCAGACCTAGCCCTTCTCTCCCTGGTCCTGGGTTTTGTCGAGCATTTCCTAGCTGTGAACCGGGTCGTCCCCATAAACGTCCCAGGGGTCCGGTTTGAACCGCTGGAGCCGGACTGCCCCACCTCCTGCTTCCCCACAGTGGAGCTGGGCATGATTTCTGCACTGTACGAGCGCTTCACGGCCCAGATCCGCGGCGCTGTGGACCTGTCCCAGTACCGGAGGACTGCTGCAGGGTCCAGCAGGGAGCTGGTGAAGAAAGTGTCAGATGTGATCTGGAACAGTCTAAGCCGCTCTTACTTCAAGGACCGGGCCCACATCCAGTCCCTCTTCAGTCTCATCACTGGTACCAAACTGGACAGCTCCGGTGTGGCATTCGCAGTCGTGGCAGCCTGCCAGGTTCTGGGTCTGAAGGACGTCCACCTGGCACTGTCTGAGGACCACGCCTGGGTGATTTTCAGCAAAAACGGCGAAGAAACGGCTGAGGTCACCTGGCACGGGAAGGGTAACGAGGACCGACGAGGACAAACCGTCGCAGCGGGAGTCAGCGAGAAGAGTTGGCTGTATCTGAAGGGCTCCTACATGAAATGTGACAGAAACATGGAGGTGGCCTTCATGGTTTGTGCCATCAACCCCTCACTGGACCTGCATACTGACAGCTCTGAGCTCCTGCAGCTACAACAGAAACTCCTGTGGTTGCTGTATGATCGAGGCGACCTGGACAGGTATCCTATGGCCATGGGCACTCTGGCAGACCTCGAAGATCAGGATCCGATCCCAGGCAAGGAGAGCCCCCTGAAAATCCACCTCAAGgctgTCAGTTCTGCTCAGCAGTACTATAACAACGAGCACATCTACCCCTACATGTACCTGGGTGGTTTCCATTACAGACACAGGGATGTGCGGGAGGCTCTCAAGTCCTGGGCTGAGGCCGCTCAGGTCATGCAGGACTATAACTATTTCCGTGAGGACGAGGAGATCTACAAGGAGTTCTTTGACATTGCAAACGACGTTATCCCCAATCTGCTGAAGgaggcggctgctgctgcagagagtcctggggagggaggggagggaggagaaggagctGACAAGGAGCACCCCAAGCAGGCAGCCGCCCTCTCCGCACTCCAGGACCCAGAATGCTTTGCCCACCTGCTGTGTTTCTATGATGGCATCTGCAAATGGGAGGAGGGCAGTCCCACGCCGGTCCTTCATGTGGGCTGGGCCACCTACCTGGTCCAGTCTCTGAGCCGCTTTGATGCTCAGGTGCGTCAGAAGGTGTCGATCATCACCAAAGAGCCAGAGGCCCAGGATGACGATGACCTGTCCAGCGACGACCCCCGGGAGGGCCGCAGACGCGGCCCCAGGAGAGAGTCCAAGCCGGATGAGCAgagctctcctcctcctgctgctcccacCTCCCCATCCAaccagcctgcagcagcagcagccgctgcaGCAGCCCAGCCCAAGAAagtgggagagggagggggccGCCGCCGCTCCTCGCAGGGCCTGCGAGGGGAAAACGCTGACGGAAAACCCAACTCCCCCAGCCCGGACTCTTCCCCCTCGTCCCAGCAACAGGTGTCCCCCTCCCCCGCCGGTCCTGTGGTCGCCTTTCAGAGTGAGAAGATGAAGGGGATGAAGGGGCTGCTGTGTGCGGCCAAGGTGAACTCCAGCGCCATCAAGCTGCAGCTCACCGCCCAGTCACAGGTCCAGATGAAGAGGCAGAAGAGCACGCCGGCCGGGGATTACTCCATGTCCTTCATGAAGCGGCAGCGCAAGTCACTCTAG
>XM_039821430.1
ATCAAATTTCCTCAAGAGCGGGACTCGGTTCCGCACCTTCACGCAACGTCCGAGCACTGACAGATAAGCGAGACGGAGGGAAACAAGGCGGACTATGGAGGAGGGGAAAAACATGTCAGGTATTGCAGGTGAGGAGAGCATCTGAGTTGACTGACAGTGGACATCATGGGTTTGCACTCAGCCCAGAAGAAACACTTTCCCCTGCGGGGGATCGACGGTGTGGTTCAGCTGTTTGATGCTGAGCTCCGCAAGTCTGAGCCAGACCTAGCCCTTCTCTCCCTGGTCCTGGGTTTTGTCGAGCATTTCCTAGCTGTGAACCGGGTCGTCCCCATAAACGTCCCAGGGGTCCGGTTTGAACCGCTGGAGCCGGACTGCCCCACCTCCTGCTTCCCCACAGTGGAGCTGGGCATGATTTCTGCACTGTACGAGCGCTTCACGGCCCAGATCCGCGGCGCTGTGGACCTGTCCCAGTACCGGAGGACTGCTGCAGGGTCCAGCAGGGAGCTGGTGAAGAAAGTGTCAGATGTGATCTGGAACAGTCTAAGCCGCTCTTACTTCAAGGACCGGGCCCACATCCAGTCCCTCTTCAGTCTCATCACTGGTACCAAACTGGACAGCTCCGGTGTGGCATTCGCAGTCGTGGCAGCCTGCCAGGTTCTGGGTCTGAAGGACGTCCACCTGGCACTGTCTGAGGACCACGCCTGGGTGATTTTCAGCAAAAACGGCGAAGAAACGGCTGAGGTCACCTGGCACGGGAAGGGTAACGAGGACCGACGAGGACAAACCGTCGCAGCGGGAGTCAGCGAGAAGAGTTGGCTGTATCTGAAGGGCTCCTACATGAAATGTGACAGAAACATGGAGGTGGCCTTCATGGTTTGTGCCATCAACCCCTCACTGGACCTGCATACTGACAGCTCTGAGCTCCTGCAGCTACAACAGAAACTCCTGTGGTTGCTGTATGATCGAGGCGACCTGGACAGGTATCCTATGGCCATGGGCACTCTGGCAGACCTCGAAGATCAGGATCCGATCCCAGGCAAGGAGAGCCCCCTGAAAATCCACCTCAAGgctgTCAGTTCTGCTCAGCAGTACTATAACAACGAGCACATCTACCCCTACATGTACCTGGGTGGTTTCCATTACAGACACAGGGATGTGCGGGAGGCTCTCAAGTCCTGGGCTGAGGCCGCTCAGGTCATGCAGGACTATAACTATTTCCGTGAGGACGAGGAGATCTACAAGGAGTTCTTTGACATTGCAAACGACGTTATCCCCAATCTGCTGAAGgaggcggctgctgctgcagagagtcctggggagggaggggagggaggagaaggagctGACAAGGAGCACCCCAAGCAGGCAGCCGCCCTCTCCGCACTCCAGGACCCAGAATGCTTTGCCCACCTGCTGTGTTTCTATGATGGCATCTGCAAATGGGAGGAGGGCAGTCCCACGCCGGTCCTTCATGTGGGCTGGGCCACCTACCTGGTCCAGTCTCTGAGCCGCTTTGATGCTCAGGTGCGTCAGAAGGTGTCGATCATCACCAAAGAGCCAGAGGCCCAGGATGACGATGACCTGTCCAGCGACGACCCCCGGGAGGGCCGCAGACGCGGCCCCAGGAGAGAGTCCAAGCCGGATGAGCAgagctctcctcctcctgctgctcccacCTCCCCATCCAaccagcctgcagcagcagcagccgctgcaGCAGCCCAGCCCAAGAAagtgggagagggagggggccGCCGCCGCTCCTCGCAGGGCCTGCGAGGGGAAAACGCTGACGGAAAACCCAACTCCCCCAGCCCGGACTCTTCCCCCTCGTCCCAGCAACAGGTGTCCCCCTCCCCCGCCGGTCCTGTGGTCGCCTTTCAGAGTGAGAAGATGAAGGGGATGAAGGGGCTGCTGTGTGCGGCCAAGGTGAACTCCAGCGCCATCAAGCTGCAGCTCACCGCCCAGTCACAGGTCCAGATGAAGAGGCAGAAGAGCACGCCGGCCGGGGATTACTCCATGTCCTTCATGAAGCGGCAGCGCAAGTCACTCTAG
>XM_039821431.1
ATGGGTTTGCACTCAGCCCAGAAGAAACACTTTCCCCTGCGGGGGATCGACGGTGTGGTTCAGCTGTTTGATGCTGAGCTCCGCAAGTCTGAGCCAGACCTAGCCCTTCTCTCCCTGGTCCTGGGTTTTGTCGAGCATTTCCTAGCTGTGAACCGGGTCGTCCCCATAAACGTCCCAGGGGTCCGGTTTGAACCGCTGGAGCCGGACTGCCCCACCTCCTGCTTCCCCACAGTGGAGCTGGGCATGATTTCTGCACTGTACGAGCGCTTCACGGCCCAGATCCGCGGCGCTGTGGACCTGTCCCAGTACCGGAGGACTGCTGCAGGGTCCAGCAGGGAGCTGGTGAAGAAAGTGTCAGATGTGATCTGGAACAGTCTAAGCCGCTCTTACTTCAAGGACCGGGCCCACATCCAGTCCCTCTTCAGTCTCATCACTGGTACCAAACTGGACAGCTCCGGTGTGGCATTCGCAGTCGTGGCAGCCTGCCAGGTTCTGGGTCTGAAGGACGTCCACCTGGCACTGTCTGAGGACCACGCCTGGGTGATTTTCAGCAAAAACGGCGAAGAAACGGCTGAGGTCACCTGGCACGGGAAGGGTAACGAGGACCGACGAGGACAAACCGTCGCAGCGGGAGTCAGCGAGAAGAGTTGGCTGTATCTGAAGGGCTCCTACATGAAATGTGACAGAAACATGGAGGTGGCCTTCATGGTTTGTGCCATCAACCCCTCACTGGACCTGCATACTGACAGCTCTGAGCTCCTGCAGCTACAACAGAAACTCCTGTGGTTGCTGTATGATCGAGGCGACCTGGACAGGTATCCTATGGCCATGGGCACTCTGGCAGACCTCGAAGATCAGGATCCGATCCCAGGCAAGGAGAGCCCCCTGAAAATCCACCTCAAGgctgTCAGTTCTGCTCAGCAGTACTATAACAACGAGCACATCTACCCCTACATGTACCTGGGTGGTTTCCATTACAGACACAGGGATGTGCGGGAGGCTCTCAAGTCCTGGGCTGAGGCCGCTCAGGTCATGCAGGACTATAACTATTTCCGTGAGGACGAGGAGATCTACAAGGAGTTCTTTGACATTGCAAACGACGTTATCCCCAATCTGCTGAAGgaggcggctgctgctgcagagagtcctggggagggaggggagggaggagaaggagctGACAAGGAGCACCCCAAGCAGGCAGCCGCCCTCTCCGCACTCCAGGACCCAGAATGCTTTGCCCACCTGCTGTGTTTCTATGATGGCATCTGCAAATGGGAGGAGGGCAGTCCCACGCCGGTCCTTCATGTGGGCTGGGCCACCTACCTGGTCCAGTCTCTGAGCCGCTTTGATGCTCAGGTGCGTCAGAAGGTGTCGATCATCACCAAAGAGCCAGAGGCCCAGGATGACGATGACCTGTCCAGCGACGACCCCCGGGAGGGCCGCAGACGCGGCCCCAGGAGAGAGTCCAAGCCGGATGAGCAgagctctcctcctcctgctgctcccacCTCCCCATCCAaccagcctgcagcagcagcagccgctgcaGCAGCCCAGCCCAAGAAagtgggagagggagggggccGCCGCCGCTCCTCGCAGGGCCTGCGAGGGGAAAACGCTGACGGAAAACCCAACTCCCCCAGCCCGGACTCTTCCCCCTCGTCCCAGCAACAGGTGTCCCCCTCCCCCGCCGGTCCTGTGGTCGCCTTTCAGAGTGAGAAGATGAAGGGGATGAAGGGGCTGCTGTGTGCGGCCAAGGTGAACTCCAGCGCCATCAAGCTGCAGCTCACCGCCCAGTCACAGGTCCAGATGAAGAGGCAGAAGAGCACGCCGGCCGGGGATTACTCCATGTCCTTCATGAAGCGGCAGCGCAAGTCACTCTAGACATGTTGAATTGTTGTAGGAGGAGTTGTTGAGACTCTTTAGGACATACTGTGAACAGCAACACGGACAGCCGATTAACCTCGCTTTTGTTTGTGAAACTATTTTACCAGTATTTTCATCCAGTGGTTCGGTTCAGTCAATATCCTCATCGTTCCTAGCAATATATTTGACTTGCACACTTGAGTTAAGCATCACATATCAGGTTTGAACTGAAGGAGTGAACAtttcattctgtttttatttaactaTAGCCAGATTTTTCTGGGGAACTGCCTAGTTTAATAGATTGTTAAGCACTCATTCATCATTAGTTTGTGTTTTAATTGGCAGCCAATTGCACACTGACTATTAACTTCTCATTGACTTACATGTGGATGTTTGAAGCCAAAGTAACGAGGACGACCAGAATACAACGTACAGATGTGTAAATATCAACTTGTACCATTAGGAATCTGTCCATGACTGAAGCCTTGGAAGTGATTAATTTAGGATAGTTACTGTGTAACATTGTCCACTTCTGCTCTATCGACAGCTTCTTTCTTGCTAGCTCTATGTTGCCTTACTTTGCCTTTGTTCTTTTCTAAAGTAGGTGGCCTTTAGTTTTAAGTTCGGCCTATTTCTAATGATTAGAGAAGACCAGGAAGACCATGCACTGTTGAGACGGAGCCACATTAGGTGGCCCCGCTACATCCTATTTGCTTGATGACTTgtggtttttgttcttgtttttgtATCTGCAAGTAATAAAGACCTGATGAAAAAGAA

Function

symbol description
men1 Predicted to enable Y-form DNA binding activity; chromatin binding activity; and transcription cis-regulatory region binding activity. Acts upstream of or within negative regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of histone methyltransferase complex. Predicted to be active in chromatin. Is expressed in several structures, including digestive system; endoderm; head mesenchyme; intermediate cell mass of mesoderm; and nervous system. Human ortholog(s) of this gene implicated in endocrine gland cancer (multiple); hyperparathyroidism; and multiple endocrine neoplasia type 1. Orthologous to human MEN1 (menin 1).

NR:

description
PREDICTED: menin isoform X1

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG:

id description
K14970 MEN1, MNN1; menin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821429.1 False 2343 mRNA 0.58 11 4436370 4447327
XM_039821430.1 False 2055 mRNA 0.59 10 4436370 4447350
XM_039821431.1 True 2655 mRNA 0.53 9 4435605 4444902

Neighbor

gene id symbol gene type direction distance location
map4k2 map4k2 coding downstream 1722 4381783 ~ 4433883 (-)
LOC120572314 LOC104952188 coding downstream 56091 4374190 ~ 4379514 (-)
rbm4.1 LOC104952189,LOC103359711,LOC100708584,LOC102786441 coding downstream 61932 4369182 ~ 4373673 (-)
sf1 sf1,LOC104940820 coding downstream 67253 4353601 ~ 4368352 (-)
pygmb pygm,LOC106531364,LOC100706889,LOC107384765 coding downstream 83922 4332263 ~ 4351683 (-)
si:dkey-106g10.7 LOC103359705 coding upstream 39220 4486570 ~ 4498207 (-)
ecsit NA coding upstream 71026 4518376 ~ 4528012 (-)
sstr1b LOC104956125,LOC103370120,LOC106577512 coding upstream 590768 5038118 ~ 5084391 (-)
znf16l LOC103362116,LOC104940792,LOC101479721 coding upstream 667644 5114994 ~ 5119327 (-)
LOC120573313 acox3 coding upstream 765788 5213138 ~ 5244957 (-)
G141042 NA non-coding downstream 115963 4318901 ~ 4319642 (-)
G141041 LOC103361642,LOC104959592,LOC105907194 non-coding downstream 120061 4314178 ~ 4315544 (-)
G140999 NA non-coding downstream 224835 4209167 ~ 4210770 (-)
G140997 NA non-coding downstream 370865 4064196 ~ 4064740 (-)
G140926 NA non-coding downstream 761142 3674091 ~ 3674463 (-)
G141109 NA non-coding upstream 31080 4478430 ~ 4482046 (-)
G141114 NA non-coding upstream 36388 4483738 ~ 4484782 (-)
G141115 NA non-coding upstream 38553 4485903 ~ 4486466 (-)
G141117 NA non-coding upstream 41950 4489300 ~ 4489504 (-)
G141123 NA non-coding upstream 66657 4514007 ~ 4526194 (-)
LOC120573533 NA other downstream 103586 4321764 ~ 4332019 (-)
G141027 NA other downstream 160331 4274651 ~ 4275274 (-)
G141003 NA other downstream 280058 4154924 ~ 4155547 (-)
LOC120573530 NA other downstream 1292416 3139121 ~ 3143189 (-)
arsj arsj other downstream 1813505 2597834 ~ 2622100 (-)
G141145 NA other upstream 194145 4641495 ~ 4664198 (-)
G141159 taf6l other upstream 213271 4660621 ~ 4661111 (-)
peli3 LOC100695529,LOC102800049,LOC102202559,LOC103148873,LOC106956141,LOC107098130,LOC103480122 other upstream 326278 4773628 ~ 4829162 (-)
G141219 NA other upstream 511329 4958679 ~ 4960005 (-)
G141234 NA other upstream 652355 5099705 ~ 5100082 (-)

Expression


Co-expression Network