LOC120572244


Basic Information

Item Value
gene id LOC120572244
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 6451662 ~ 6452673 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821466.1
GCCGTCACATTCACTGCTCTGTCAATCGGTgttgttgaattttttttctccttaccATATCATCCACCTCTCAAGCAGCCACCATGAGCCAGCTAGAGACAGCCATGGCCATTCTGATGAAGGTCTTTGACCAATATGCTGCTGCCGATGGCAAGACCGGCTCCCTGAGCAAAGCCGAGGTGAAGACTTTGCTGGAGAAGGAGCTGCCTCAACTAATTAAGGCAGCAAAGAACAAAGAAGATGTAGACAAGCTGATAAAGAGTCTGGATTTCAACGGAGACGCCGAGGTGGACTTTGAGGAATTCGTGGTGCTGGTAGCTGCTCTCACCTGTTCCTGCCACGGCCGCCAAAGCAAGAAGTGAGCAGGGTGGCCGCGCCCCGGGGTGGGGCCAAATGGCAGCGACATACAATCCCCTGTAGTTACTGCTTTCTGTTACAGCTCAATAAAAGGATTTACGTACCTGTG

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0050786 RAGE receptor binding molecular_function

KEGG:

id description
K23771 S100P; protein S100-P

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821466.1 True 466 mRNA 0.51 2 6451662 6452673

Neighbor

gene id symbol gene type direction distance location
kiaa0232 kiaa0232 coding downstream 19064 6420533 ~ 6432598 (-)
LOC120573386 NA coding downstream 83886 6365971 ~ 6367776 (-)
senp3b LOC104962536 coding downstream 90551 6343629 ~ 6361111 (-)
eif4a1a LOC107098142,LOC103365478,LOC100693841,LOC103148870,LOC102238331,LOC101477102 coding downstream 110925 6331688 ~ 6340737 (-)
LOC120573666 NA coding upstream 3334 6456007 ~ 6490226 (-)
LOC120572494 LOC102208922,LOC107376753,LOC104965782,LOC101158483,LOC106907457,LOC103033313 coding upstream 62207 6514880 ~ 6546583 (-)
c14h11orf68 clg18h11orf68,LOC104919665,LOC103366235,LOC104965781,LOC106907460,LOC102230372 coding upstream 113897 6566570 ~ 6569196 (-)
LOC120573537 NA coding upstream 203283 6655956 ~ 6657450 (-)
nrxn2b nrxn2b,nrxn2,LOC106577539,LOC108427447,LOC102303057,LOC101464276,LOC102778344 coding upstream 272598 6725271 ~ 7395078 (-)
G141613 NA non-coding downstream 185079 6266151 ~ 6266583 (-)
G141612 NA non-coding downstream 185637 6265440 ~ 6266025 (-)
G141601 NA non-coding downstream 294249 6156052 ~ 6157413 (-)
G141470 NA non-coding downstream 459435 5989895 ~ 5992227 (-)
G141468 NA non-coding downstream 480275 5970935 ~ 5971387 (-)
G141667 NA non-coding upstream 3266 6455939 ~ 6511995 (-)
G141683 NA non-coding upstream 105625 6558298 ~ 6645212 (-)
G141688 NA non-coding upstream 124504 6577177 ~ 6578755 (-)
G141741 NA non-coding upstream 942486 7395159 ~ 7462473 (-)
G141773 NA non-coding upstream 1065592 7518265 ~ 7518467 (-)
tbc1d14 tbc1d14 other downstream 35205 6375972 ~ 6416457 (-)
LOC120572256 NA other downstream 80562 6353464 ~ 6371100 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other downstream 135845 6308898 ~ 6315817 (-)
LOC120572220 NA other downstream 220365 6221971 ~ 6231297 (-)
gal3st4 gal3st4,LOC104939968 other downstream 231402 6177921 ~ 6220260 (-)
LOC120572295 rasgrp2,LOC104942268 other upstream 1196299 7648972 ~ 7703618 (-)
fcer1g NA other upstream 1329238 7781911 ~ 7787667 (-)
LOC120573451 NA other upstream 1388248 7840921 ~ 7937490 (-)
G141913 NA other upstream 1482557 7935230 ~ 7987441 (-)
LOC120572400 NA other upstream 1654974 8107647 ~ 8112684 (-)

Expression


Co-expression Network