tifa


Basic Information

Item Value
gene id tifa
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 7999497 ~ 8000769 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821604.1
GCAGCATTGCACTGGGTCCTCGAGGAGTGACGAAACTCCAGAGAGTAGAAGGAAAACAACGGTCGAGCGTATTGTTTTCTTTTGGAGCAGCACCACCGTTACTTATAAGTCAGCTGTTGCTTAGAGTACTCTACATTTGATCTAGCTTTTCTGTGGACGGAGTATCTATCTACTTCGCCAAATGAAAAAAACTTCAACATTCGGACTGTCATCACTGGAAGTCAATAGATCGATCTAGTTCTAGATACTGATTTTCATcaggagcttttattttgattttttttttttttctctcatgatGAATGTCTCCCAGACAATGGAGACGGAGGAGGATCTCCTGACCCGTCTCCACGTCCAACTGTACCACCCTCAGCAGAGTTGTAAGGGCCTTTTCGAGCTGCTTCCTCTGGGGAACAAGAGCAAGCACTCGGCAGACGAGCCTCTCCGGCTGGGACGCGACGCCCAGGGCTGCACCTTCGCCCTGGTCGACGCCCGGGTGTCCCGCAAGCAGCTGGCCCTCCACGCCTACCGCACCCCCGAGAGCCCAGACTTGCTGTTCGCCATCCAGAACCTGAGCCAGAGGGGACGTCTGTCGGTGAACAGCTCGGCGCTGGGCTTCCTGGAGAGGATGGATCTCCCGGACAAGGCCCTGGTCCGGTTCGGAGAGTATGAGATGCTGATCATCCGTGAGTCCGGCGAGGCCAAGGGCAGCTTCGAGGTGGAGTTTGAGGTGCTGGCAGTGCCTCCGTCCAGAGAGACATGCATGTACGTGCCTAGTATGAGCCCCGTCATGGAAACAGGCTGCTCACGTGTGATTAACGGTCTTCCAGGTGAACTCAGAGTAGGCCTCCTCGGCCCCCTTGAGACCGATGAGACTCTCATGTTTAATTCCTGATGTGACTTTTAACTTTGTTATTGACTTGCATTTGATTCAGTACAAACGGCAACGTGTAGGCTATGACTGGATCTCTCCTTGTAATGTGAAATCATAGTATTCTTATTTAGGTATTATTTTGCACCCTGTTACTCTATTACTCCATGTATAAGTTAAAGACCTGTGATCCTATATTGTAATAACAGCTACTTTTAAAGTATAATACAGCTATTTGTTTCAACATTTCAACTTGAGCACATTAAAGTCTCTTTTTGTAAACA

Function

NR:

description
TRAF-interacting protein with FHA domain-containing protein A-like

GO: NA

KEGG:

id description
K23826 TIFA; TRAF-interacting protein with FHA domain-containing protein A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821604.1 True 1155 mRNA 0.49 2 7999497 8000769

Neighbor

gene id symbol gene type direction distance location
haus4 haus4 coding downstream 31457 7963976 ~ 7968040 (-)
dock11 dock11 coding downstream 37790 7874651 ~ 7961707 (-)
LOC120573599 NA coding downstream 128424 7861720 ~ 7871073 (-)
trnar-ucu_15 NA coding downstream 162203 7837221 ~ 7837294 (-)
kirrel1a kirrel,LOC102307446,LOC102202990,LOC101467841,LOC102781300 coding downstream 164469 7797279 ~ 7835028 (-)
LOC120572390 NA coding upstream 64454 8065223 ~ 8067060 (-)
LOC120572369 NA coding upstream 75048 8075817 ~ 8079633 (-)
LOC120573539 NA coding upstream 98885 8099654 ~ 8102359 (-)
LOC120572382 NA coding upstream 131116 8131885 ~ 8134082 (-)
LOC120572367 NA coding upstream 133730 8134499 ~ 8136411 (-)
G141920 LOC102310269,LOC102201257,LOC102782862 non-coding downstream 20708 7977874 ~ 7978789 (-)
G141912 NA non-coding downstream 153413 7844105 ~ 7846084 (-)
G141781 NA non-coding downstream 440323 7558812 ~ 7559174 (-)
G141778 NA non-coding downstream 477704 7521213 ~ 7521793 (-)
G141774 NA non-coding downstream 480740 7518509 ~ 7518757 (-)
G141932 LOC104946620,LOC103361161 non-coding upstream 5059 8005828 ~ 8009859 (-)
G141974 NA non-coding upstream 80095 8080864 ~ 8081655 (-)
LOC120572408 NA non-coding upstream 221070 8221839 ~ 8222181 (-)
G141995 NA non-coding upstream 226952 8227721 ~ 8228114 (-)
G141996 NA non-coding upstream 227411 8228180 ~ 8250562 (-)
G141913 NA other downstream 12056 7935230 ~ 7987441 (-)
LOC120573451 NA other downstream 62007 7840921 ~ 7937490 (-)
fcer1g NA other downstream 211830 7781911 ~ 7787667 (-)
LOC120572295 rasgrp2,LOC104942268 other downstream 295879 7648972 ~ 7703618 (-)
tbc1d14 tbc1d14 other downstream 1583040 6375972 ~ 6416457 (-)
LOC120572400 NA other upstream 106878 8107647 ~ 8112684 (-)
LOC120573543 NA other upstream 331596 8332365 ~ 8335374 (-)
G142077 NA other upstream 464313 8465082 ~ 8465612 (-)
LOC120572370 NA other upstream 509624 8510393 ~ 8523919 (-)
LOC120572366 NA other upstream 516254 8517023 ~ 8543732 (-)

Expression


Co-expression Network