LOC120572494 (LOC102208922,LOC107376753,LOC104965782,LOC101158483,LOC106907457,LOC103033313)


Basic Information

Item Value
gene id LOC120572494
gene name LOC102208922,LOC107376753,LOC104965782,LOC101158483,LOC106907457,LOC103033313
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 6514880 ~ 6546583 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821832.1
GTGGGAGGAGGTTGGCGGTGCGTTTCTGTGCAGTGAGGCGGTGCCTGCCCTGCCTACTCTGGACTGCGGCGGGCTGAGTTGTTAGCTACAGAAATGGCGGAGGGGGAGTTGGACGTCGACTCGCTGATTTCCAGGCTTTTGGAGGTGCGAGGATGTCGTCCAGGGAAGATTGTCCAGATGACGGAGGCCGAGGTGCGCGGCCTCTGCATCAAATCCCGTGAGATCTTCCTCAGTCAGCCAATCCTTCTGGAGCTGGAGGCTCCGCTCAAAATCTGTGGCGATATCCACGGACAGTACACAGACCTGCTGAGGCTCTTTGAGTATGGCGGCTTCCCTCCAGAGGCCAACTACCTGTTCCTGGGCGACTATGTGGACAGAGGGAAGCAGTCCCTGGAGACCATCTGCCTGCTGCTGGCGTACAAGATCAAATACCCTGAGAACTTCTTCCTGCTCCGGGGCAACCACGAGTGTGCCTCCATCAACCGCATCTACGGCTTCTACGACGAGTGTAAACGCAGATTCAACATCAAGCTGTGGAAGACGTTCACCGACTGCTTCAACTGCCTGCCCATCGCTGCCATAGTGGACGAGAAGATCTTCTGCTGTCACGGAGGTCTCTCTCCAGACCTGCAGTCTATGGAGCAGATCAGACGCATCATGAGACCCACAGACGTGCCCGACACAGGCCTCCTGTGTGACCTGCTGTGGTCTGACCCCGATAAGGACGTCCAGGGCTGGGGAGAAAACGACCGCGGCGTCTCCTTCACCTTTGGCGCCGATGTGGTCAGCAAGTTCCTCAACCGCCACGACCTGGACCTCATCTGCAGAGCCCACcagGTGGTGGAAGATGGTTATGAGTTCTTTGCCAAGCGGCAGCTGGTGACTCTGTTCTCGGCTCCCAACTACTGTGGCGAGTTTGACAACGCCGGCGGCATGATGAGCGTGGATGAAACCCTGATGTGCTCCTTCCAGATCCTGAAGCCATCTGAGAAGAAAGCCAAGTACCAGTACGGAGGGATGAACTCGGGTCGGCCCATCACTCCACCCCGCACAGCCCAACCCCCAAAGAAACGATGAAGAAGGacggagggaggaagagacGCAGAGAACAAGAGAGGGATGATGGTCTCCTGTTGGCTTttcacaacccccccccccccaaaaaaataaataaagcaaaaGCAACACTTGGCGGAGAGGGGGAAACAAAACGAACACAAACTATTTGAAAGGACACACCCATACCTGTCTTTCTCTTCTTATGTCCCTCTGAACCGCTTGTCACACTCTTCTTCCtcaacgcttttttttttttccttctcgcTGCATCTgtgtaacatttttaaaaaacaaagtgttCAATGACAAGGGTGTCATTCTGTAGCATAtcagagtattttttttctttttgtgtctttttgtcctttttaattttcttaaCAGAATGACAACTAGTTTAGTGTGCCACACCTCCCCACTCCCCCCCGCCTGTACAGACACAACAGGTAATAATGACGACTGCTGGGTTTTCAATAAATAATACAGGAAATTAATCCA

Function

NR:

description
PREDICTED: serine/threonine-protein phosphatase PP1-beta catalytic subunit

GO:

id name namespace
GO:0016311 dephosphorylation biological_process
GO:0004721 phosphoprotein phosphatase activity molecular_function

KEGG:

id description
K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821832.1 True 1557 mRNA 0.53 8 6514880 6546583

Neighbor

gene id symbol gene type direction distance location
LOC120573666 NA coding downstream 24654 6456007 ~ 6490226 (-)
LOC120572244 NA coding downstream 62207 6451662 ~ 6452673 (-)
kiaa0232 kiaa0232 coding downstream 82282 6420533 ~ 6432598 (-)
LOC120573386 NA coding downstream 147104 6365971 ~ 6367776 (-)
senp3b LOC104962536 coding downstream 153769 6343629 ~ 6361111 (-)
c14h11orf68 clg18h11orf68,LOC104919665,LOC103366235,LOC104965781,LOC106907460,LOC102230372 coding upstream 19987 6566570 ~ 6569196 (-)
LOC120573537 NA coding upstream 109373 6655956 ~ 6657450 (-)
nrxn2b nrxn2b,nrxn2,LOC106577539,LOC108427447,LOC102303057,LOC101464276,LOC102778344 coding upstream 178688 6725271 ~ 7395078 (-)
LOC120573565 NA coding upstream 1194649 7741232 ~ 7744036 (-)
cskmt mettl12 coding upstream 1201196 7747779 ~ 7749846 (-)
G141667 NA non-coding downstream 2885 6455939 ~ 6511995 (-)
G141613 NA non-coding downstream 248297 6266151 ~ 6266583 (-)
G141612 NA non-coding downstream 248855 6265440 ~ 6266025 (-)
G141601 NA non-coding downstream 357467 6156052 ~ 6157413 (-)
G141470 NA non-coding downstream 522653 5989895 ~ 5992227 (-)
G141683 NA non-coding upstream 11715 6558298 ~ 6645212 (-)
G141688 NA non-coding upstream 30594 6577177 ~ 6578755 (-)
G141741 NA non-coding upstream 848576 7395159 ~ 7462473 (-)
G141773 NA non-coding upstream 971682 7518265 ~ 7518467 (-)
G141774 NA non-coding upstream 971926 7518509 ~ 7518757 (-)
tbc1d14 tbc1d14 other downstream 98423 6375972 ~ 6416457 (-)
LOC120572256 NA other downstream 143780 6353464 ~ 6371100 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other downstream 199063 6308898 ~ 6315817 (-)
LOC120572220 NA other downstream 283583 6221971 ~ 6231297 (-)
gal3st4 gal3st4,LOC104939968 other downstream 294620 6177921 ~ 6220260 (-)
LOC120572295 rasgrp2,LOC104942268 other upstream 1102389 7648972 ~ 7703618 (-)
fcer1g NA other upstream 1235328 7781911 ~ 7787667 (-)
LOC120573451 NA other upstream 1294338 7840921 ~ 7937490 (-)
G141913 NA other upstream 1388647 7935230 ~ 7987441 (-)
LOC120572400 NA other upstream 1561064 8107647 ~ 8112684 (-)

Expression


Co-expression Network