LOC120572644 (LOC103375309,LOC102198148,LOC102310961,LOC102782809,LOC101467581,LOC103389888)


Basic Information

Item Value
gene id LOC120572644
gene name LOC103375309,LOC102198148,LOC102310961,LOC102782809,LOC101467581,LOC103389888
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 37019550 ~ 37045288 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039821962.1
TTTCGGCGTGTTTTAGGTGAGTTTGGCGAGGTGTGTCGCGGCCGGCTGCGCGTGCCGGGCCGGAGGGAGAACTACGTGGCGATCAAGACGCTGAAGGGCGGCTACACGGAGAAGCAGAGGCGGGACTTCCTGTCGGAGGCGTCCATCATGGGCCAGTTCCAGCACCCCAACATCATCCACCTGGAGGGGGTCATCACCACCTCCTGCCCCGTCATGATCCTCACCGAGTACATGGAGAACGGGGCTCTGGACAGCTTCCTCAGGATGAACGACGGGCAGTTCACCCCCATCCAGCTGGTGGGGATGCTGCGCGGCATCGCCGCGGGGATGAAGTACCTCTCAGAGATGAGCTTCGTCCACCGAGACCTCGCAGCCAGAAACATCCTGGTCAACTCCAACCTGGTCTGCAAGgTTTCAGATTTTGGTCTCAGCAGGTTTCTGACTGAGAACTCCTCCGACCCGACGTACACCAGCTCTCTGGGCGGGAAGATTCCTATTCGCTGGACGGCGCCCGAGGCCATAGCCTATCGGAAGTTCACCTCGGCCAGCGACGCCTGGAGTTACGGCATCGTCATGTGGGAAGTGATGTCATACGGAGAGAGGCCATACTGGGACATGAGTAACCAGGATGTGATTAATGCCATCGAGCAGGACTACcggctgcccccccccccagactgcccctcctccctccactcTCTGATGCTGGACTGCTGGCAGAAGGAACGAGCCAATCGGCCGAGGTTCTGCGACGTGGTGGCGGCGCTGGATAGGCTGATCAGAAACCCCGCCTCCCTGAAGGTCACGCTGGCCGAGGGACGAAGtGTGTCCCAGCCCCTGTTGGACCAGcggcccccccctcccctctcggCCTGTGCGtctgtctctgattggctgagagcgATAAAGATGGAGCGTTACGAGCAGAGCTTCCTGCAGGCCGGCTTCAACAGCCTGGACATGGTCTCACAGCTCAATACAGaCGACCTGCTCCGAGTGGGCGTGACGCTCGCCGGCCACCAGAAGAAGATGCTCTCCTCCATTCAGACGCTCCGGATACACAAAGCCCCGCCCCCTCTGCTctactgaccaatcacagcccAGACCGCAACTCTCAGAAGCACTGACAGTTTCTCTAACTCACCACAGAACACTTAGACCAATCAGAGAGCCCGAGAATGGCTGAGACTCCACCTCCTGGTCggtctgaccaatcagagagcccTTTGATGGCTGAGACTCCGCCTCCTGGTCagtctgaccaatcagagaatTGGAAACAGCTTGAAAGCACAGAAACAAACGTTAGGAAACATTAAATACTTTCTTCAGGATCTTCTAACGTAACGATGACTCAGGTGCTACAGGACTCCGCCTACTTCATCCCGACCAATCGGAGCCGAGGACACAGTTGTCTGCTTTAACTTTCGAATTTTCTGCCGCTCAGGAAAACCTAAGCTCCTCCTCCCTAAAGTCTGGGCGTTCAGCGAAGAACAAAGacacgtttcctgggtgaaagtattagaaatatatgaatatatatgaatatatttgaatatatatgaatatatttgaatatatatgaatatatatgaatatatatgaatatatatatatatatcagcctACAGTTAGACAGGTGTAGTGTAATTCTGTGTAACGTCCACGAAGGTTAAAGTTCAGGAAACCTAAGTCtggttttagtttagtttatttacacAAATATAAAAGAATGAACAGGATACGATGAGTAACGGTgcgagagaaagaggaagtggcGTTCTTCAGGACAAAACTCAACCTtttttggcgtttttccatcacatggtacctgctcgcctCGCCTCACCTTGTGCGCTacgtacagcactttggtcagcgccagctgtttttaaacgtgctatagaaataaactttacttacttaccttttagtatcgcctcagctcgccgGGATCCTCGACAgacaacgtgacatcatgactttgtgtaaacatacacgcccactttcctaaagccgaGTGGCGAGTTATCTGGACGCATTTTGTGCTCTCCACCTGTATGtctacagcagatgtaaacatacacaccacgcggcgagaacgtgacgtactatcgcAA

Function

NR:

description
PREDICTED: ephrin type-B receptor 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039821962.1 True 2120 mRNA 0.52 8 37019550 37045288

Neighbor

gene id symbol gene type direction distance location
LOC120572832 NA coding downstream 156067 36846442 ~ 36863483 (-)
LOC120572829 NA coding downstream 268481 36748312 ~ 36751069 (-)
LOC120572792 LOC107396478,LOC103365269 coding downstream 341024 36661533 ~ 36678526 (-)
LOC120572815 NA coding downstream 382736 36611240 ~ 36636814 (-)
LOC120572817 NA coding downstream 395607 36585520 ~ 36623943 (-)
LOC120572646 NA coding upstream 107952 37153240 ~ 37198615 (-)
LOC120572647 hectd4 coding upstream 208871 37254159 ~ 37256033 (-)
LOC120572649 NA coding upstream 243950 37289238 ~ 37296165 (-)
LOC120573352 NA coding upstream 517140 37562428 ~ 37566785 (-)
LOC120573284 LOC101476439,LOC102079915 coding upstream 609403 37654691 ~ 37675082 (-)
G149735 NA non-coding downstream 3493 37012864 ~ 37016057 (-)
G149743 NA non-coding downstream 8957 37009110 ~ 37010593 (-)
G149741 NA non-coding downstream 33366 36937460 ~ 36986184 (-)
G149722 NA non-coding downstream 46540 36891258 ~ 36973010 (-)
G149723 NA non-coding downstream 68893 36892232 ~ 36950657 (-)
G149779 NA non-coding upstream 165461 37210749 ~ 37239255 (-)
G149784 NA non-coding upstream 223968 37269256 ~ 37269995 (-)
G149799 NA non-coding upstream 320224 37365512 ~ 37365945 (-)
G149739 NA non-coding upstream 365542 37410830 ~ 37432137 (-)
G149805 NA non-coding upstream 387964 37433252 ~ 37445846 (-)
LOC120572643 NA other downstream 223422 36766349 ~ 36796128 (-)
G149706 NA other downstream 249023 36769815 ~ 36770527 (-)
LOC120572641 NA other downstream 437730 36530578 ~ 36581820 (-)
LOC120572755 NA other downstream 1137483 35876088 ~ 35882067 (-)
G149408 NA other downstream 1353306 35665657 ~ 35666244 (-)
G149751 NA other upstream 11294 37056582 ~ 37073650 (-)
G149821 NA other upstream 545307 37590595 ~ 37607056 (-)
G149826 NA other upstream 555654 37600942 ~ 37602820 (-)
G149973 NA other upstream 798875 37844163 ~ 37899527 (-)
LOC120572652 NA other upstream 915354 37960642 ~ 37963748 (-)

Expression


Co-expression Network