eif4a1a (LOC107098142,LOC103365478,LOC100693841,LOC103148870,LOC102238331,LOC101477102)


Basic Information

Item Value
gene id eif4a1a
gene name LOC107098142,LOC103365478,LOC100693841,LOC103148870,LOC102238331,LOC101477102
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 6331688 ~ 6340737 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822037.1
TTACTGCTAAATGACGGCGGTCTGTTGCAATGAGAAGACCTTTTTGTGTGTTGTCAACGTATATAACACATCTCTGCCGCAGTTTCTTTCTTTGGAATAATGTCGGCTGAATACGATAATAGAGACAATGGCCCGGAAGGCATGGAGCCAGATGGGATCATTGAGAGCAACTGGACTGAGATCACTGACAGTTTTGATGAGATGAACTTGCGCGAGGCTCTGCTAAGGGGAATTTATGCCTATGGTTTTGAGAAGCCCTCTGCTATCCAGCAGAGAGCTATTATGCCTTGTATCAAGGgcTACGATGTGATTGCTCAGGCCCAGTCTGGCACTGGGAAGACTGCCACCTTTGCCATCTCCATCCTTCAGCAGATTGATGTGGAGATGAAAGCCACTCAGGCTCTGGTCCTGGCTCCCACCAGGGAGCTGGCTCAGCAGaTCCAGAAGGTGGTGCTGGCCCTGGGTGACTACATGGGAGCCAATTGCTACGCCTGCATCGGAGGGACCAGCATTCGCAGTGAAGTCCAGAAACTGCAGGCTGAATCCCCTCACATTGTGGTGGGAACCCCCGGCCGCGTCTTCGACATGTTAAATCGCAAAAACCTCTCTTCTAAGcacatcaaaatgtttgtgCTGGACGAGGCTGACGAGATGCTTAGTCGAGGGTTCAAGGACCAGATCTATGAGATTTTCCAGAAACTGGCTAGCAGCACACagGTTGTCCTTCTGTCGGCCACCATGCCAGCTGACGTGTTGGAGGTAACAAAGAAGTTCATGCGTGAACCCGTCAGAATCCTGGTAAAGAAGGAGGAGCTGACCCTTGAGGGTATTCGTCAGTTCTACATCAATGTGGAGAAAGAGGAGTGGAAGCTGGACACGCTGTGTGACCTGTATGAAACCCTGACCATCACACAAGCGGTCATCTTCATCAACACGAGGAGGAAAGTGGACTGGCTGACTGAGAAGATGCACGCCAGGGACTTCACCGTGTCTGCCCTGCACGGTGACATGgaccagaaagagagagacttgATCATGAGGGAGTTCCGCTCTGGCTCCAGTCGAGTCCTCATCACCACTGACCTGTTGGCCAGAGGTATTGATGTCCAGCAGGTGTCTCTAGTCATCAACTACGACCTGCCGACCAATAGGGAAAACTACATCCACAGgATTGGTCGGGGCGGTCGTTTCGGCAGAAAGGGAGTAGCCATCAACATGGTTACCGAGGATGACAAGCGAACCCTGAGGGACATTGAGACATTCTACAACACCACCGTCGAGGAGATGCCCATGAATGTGGCCGATCTTATCTAGAAGCTGTTgtccaccccccctcccctcccccactTATTTTAGCAGTCAAATCTTGTTTCTTATACGATCTGAATTCTAAGATCTTTCTTTTGCTAAATTCCGCCATGACTTTACCCTCTACATTCTAAGGGAAGGAAGAATGTGGCCATTATTCCTTCCTAACCTTTTGAAATAGTTTTTTGGCCGTTTTTTTGGAAGGATGAATTACTGACCTGTTTCATCTGCTTGCCATAGTCCATTAGCCCATTATTGGCACCTAAATTCATCCTGCAGCTAATCCCTCCTCTAACTCTTCAAGCATTAATTAGAagattttgttttgcaaactgAGGACTTAACATCGAACAAGTGAGTTTGTAACTGGATCCCACACTTATGACTCATAACCGTGTTTGCAAAAAcgcatacataaaataaaacccCCGGAGTTGATGTTTTGAAAGGATTCTAGCTCACTGTAAGCAAAAGCTCGACATTAAATTAATAGCTTACCATTCAATTTAAAAACTGGTCTCAATTGATCAACAAGCATGACGCTGACTCGAAGATCAGCGACGCGTTTGTGAAACGCGTCTGTGATTTTTGCACCCGCACGCCGTCGGCAGGTGCCGCACATGCTCGGTGACCGACCCGCGAGTGGTTTAGACTGCAGTTCAGTTTGGACTCAAACGCCGCAATGATCTATGGGAAGTGCTGCATTTGACCAGATCAGTATTTAAACAACCTTCAGTGTACTGGAAACAGCCTTTTAACTCACATCCATGATCATGTTAAAGAGGTTTTGGGGTCTAGAGTACACAGGGCATATTCAATAAAAAGACCTATATAGTAAAATCCATCATGAA

Function

NR:

description
PREDICTED: eukaryotic initiation factor 4A-I

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K03257 EIF4A; translation initiation factor 4A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822037.1 True 2159 mRNA 0.48 11 6331688 6340737

Neighbor

gene id symbol gene type direction distance location
tm4sf21b NA coding downstream 88019 6237573 ~ 6243669 (-)
trappc14 LOC104941436 coding downstream 146064 6158858 ~ 6185624 (-)
trnas-uga_22 NA coding downstream 302766 6028841 ~ 6028922 (-)
serpine1 serpine1 coding downstream 326470 5998118 ~ 6005218 (-)
vgf NA coding downstream 364260 5959440 ~ 5967428 (-)
senp3b LOC104962536 coding upstream 2892 6343629 ~ 6361111 (-)
LOC120573386 NA coding upstream 25234 6365971 ~ 6367776 (-)
kiaa0232 kiaa0232 coding upstream 79796 6420533 ~ 6432598 (-)
LOC120572244 NA coding upstream 110925 6451662 ~ 6452673 (-)
LOC120573666 NA coding upstream 115270 6456007 ~ 6490226 (-)
G141613 NA non-coding downstream 65105 6266151 ~ 6266583 (-)
G141612 NA non-coding downstream 65663 6265440 ~ 6266025 (-)
G141601 NA non-coding downstream 174275 6156052 ~ 6157413 (-)
G141470 NA non-coding downstream 339461 5989895 ~ 5992227 (-)
G141468 NA non-coding downstream 360301 5970935 ~ 5971387 (-)
G141667 NA non-coding upstream 115202 6455939 ~ 6511995 (-)
G141683 NA non-coding upstream 217561 6558298 ~ 6645212 (-)
G141688 NA non-coding upstream 236440 6577177 ~ 6578755 (-)
G141741 NA non-coding upstream 1054422 7395159 ~ 7462473 (-)
G141773 NA non-coding upstream 1177528 7518265 ~ 7518467 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other downstream 15871 6308898 ~ 6315817 (-)
LOC120572220 NA other downstream 100391 6221971 ~ 6231297 (-)
gal3st4 gal3st4,LOC104939968 other downstream 111428 6177921 ~ 6220260 (-)
G141439 NA other downstream 488542 5743559 ~ 5843146 (-)
G141400 NA other downstream 731226 5596958 ~ 5600462 (-)
LOC120572256 NA other upstream 12727 6353464 ~ 6371100 (-)
tbc1d14 tbc1d14 other upstream 35235 6375972 ~ 6416457 (-)
LOC120572295 rasgrp2,LOC104942268 other upstream 1308235 7648972 ~ 7703618 (-)
fcer1g NA other upstream 1441174 7781911 ~ 7787667 (-)
LOC120573451 NA other upstream 1500184 7840921 ~ 7937490 (-)

Expression


Co-expression Network