LOC120572732


Basic Information

Item Value
gene id LOC120572732
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 15193388 ~ 15203101 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822123.1
TTCCCCGCTCGCTATGCAAACAAAATGCACGCTGCAAAAGTTAGAGGCTGCTAACTTAGCGTTTAATTAATACAAGTTTGTGTGTAACGTTAATTAACTCGAATTTACGAGTACATCATGCTGTGGGAGTGCATGTGTTACTAAACATGGACATATTTAGAGAGGAGACGGAGTTTACTGACATCCGAGTTGTCCAAAGGGTTGTGGATTTGTTTGAGAGTCGACCTGGTTTTCAAAGGATAGTAAGACTTGGCCTTGTTGCAAATATGGAATACGATGATGAGCGAGATGTTGCAGATGAGGATGATTATGGAATTGAAAATTGGGCACATGATCACAACAATTTCCAGGGATTCCCAATGCTCTCTGACTGGATTAGTGAAAGGTTGAACCATACAAGGTCATCCAGCTCTGTTTATCAACCTCCACTGCATTACTACACTTCAACTTGTGACATTCCTCGCCCATCCTCTGTGGAAGTTCAGGCAAAGGAGAGTGACTCTGAAAGAAAAGACAGATTATTAGAAGAagtgaaaaaaagcaaagaaaaagctGAGAAGAAGCGACTTAAGAAACAGAaacggaaagaaagaaaacgtCTTGAGAAGTTGGAGAAGGAAAAACAGAACCCCGTAAGAAATGAAGAGGGAAAAGATGATGTACAGCAATCTAAAGCGGGGGAGAGCCAACTAGCTAATGATGAATccaaaaacaatacaatttccaGTGTTAAACAGTTGGCTACAGCAAAAGATACAGACAGCAGTAACAGTAGTGAAGACGAATCCAGTGATGAAGATAGCGACACCAAGAATGAATCTGAGgaactgGACATGACTAGTACTTTTGTGAATAAAGCTGCTCTTATAGCCAGGCGTAAATTGGAGCAGAAGCCTAGGCCTgagaggagggagaaaaagaagatCCTTGTCAAAGAAGAACCGAAAACTGTCCCTGAAAAACCTAATAAAGACCTGGAGGTTGAAAAGAAGGATTCTGTCGCCCCTAGCAGCCCCACTAATGTAGATAACCTAAAAATAAGTACTGATCTTGCAGttATTGGAAATAGGTTTGCAAGTGCTGGAGACTTTAATATGGCTGTGAAGTATTTCACGGATGCAATTAAGTACAACCCTACGGAGTTTAAGTTGTTTGGAAATCGCTCCTTCTGTTTTGAAAAGATGCAAGAATATGAGAAGGCGCTAACTGATGCGGAGTTGTCTCTCAGCATGTGGCCAGGTTGGGTTAAAGGCCTGTTTAGGAGGGGCAGAGCTTTGGCAGGTCTAAAGAGGTATGATGAGGCTGCCCAAGCCTTCAGGGAGGTTCTCAAACTGGACAGTTCCTGTGCAGACGCTGCCCAGGAGCTGATGCGGGTGCAGATAACACAACTAATGGGGTATGGTTTCACTCGGGAGCAGAGCTCAAATGCTTTAATTATTCACGGGACAGTAAATAAGGCACTAGAGGTGCTGTCCAAATTAAACCATCAACCAGGAGCTATTCAAAATGGCACTCTGCAGCTAGCTCAACTAGCAAATGTGACTGGAGTGTCTCCAGTCCTTTCAGCCAATACTATCCCTGCTCATCCTCCTCACTCCTATGATTCACCAAAAACGGCATTTAAGAACAAACCTTTAGGCCCAGTCCAGAATATGATGAATGTCCAGAGTCAACCAAAGCCCATTCCAAATCAGGCTACGAAGATCAACAATGAAGCCAATCGGCCACCACAAGAGCTATTTCCAGTTTGGGTGGGAAACCTGGTTTACCCAGTAACCGAGTCTGTGATAACCAACATATTTAACAAGGCTGGGGTTGTCCATAGTGTGAAGGTTCTGGTTTACAAACGATGTGCCTTCGTAAACTTTACAAAACAAGAGTATTGTGATGAAGCTATCAGACGCTTCCATGGCCTTGACCTGAATGGCATGAAGATTGCTGTGAGGTATCCAGACAGGATCCCTCAGGGCATGGGCATTTCCAGATCTGCCCTCAAAGCTGATGATCTGCAAGATGACAATATGCGGCAAAACGAGCACATTGATGGGAGGAATGCAGTTGGAAGCCGAAGACCATTTCGTCCTTACAGACACGTCCCAGAGTACAGAGGCAGCAACAACTACTGAAAGGAAACCAGATGCTTATGAACAGGTCTGACGGTCCAGTACAGATTAATCACTGGTATCGACAGATACCGAAACCAATGCTTATTTggtagagtttttttttttttaaagaagggaTTTAGGTATTGGTAAGTGAAAATGATTTGACCTACTGATGAACTTTGACCAAAGGTAAAAACTTTGTTTATATGAGCTGATGTTTATAGGTAATTACAAAAGCTTCCTGATGCCAAGATTATTAAACCCTGACAAATACATTGGAGGTTGACATtcatattatattttaaatgtcagtATACAGGAAAATCTGTTCATAATTTACATATTTCATTTAAGGTTTAATTTTTAAACAGAGACCTAGTTTATATAGCAGCCTCTTCCTATATTTACGAGTGCCAAAATAATTCTAGGTTAAATTAATGGGAGACTTAATTCCTAAATTATGGTATTAAAATTAGGCCCCAGAATCCAGTATGACAGGCTTTAAAAGCAAAgttaatcttttatttttaaggtTCATATAGACACAGATGCAGGACTCATCATTGGTGTACATATGTACTCATTGTGAACTTTACAATGCAGTCTTTAAAACTTATCTAAATGATCTGTAATCAGTATTAAACCTCTGTAGTGTATATATTTTCAGAATTATCTTCATTATTCTCTAATCTATTAATACAAGTTGCACCTTTTTATCCTGTCTTGCCATATAAACAGTCCTTGTAAATCCTATATAATACAACAGGAATTATTTTGTTGCATACTTAGTTTATTGCTCATGGTTAATTTAGCTATTCATCAGTGGTTGATCATGGAGTGTCATCTTATTTTATTCAGATGCCTTCATTAATTACAAAGTTTGTTCTTAATTCAAGAATTAAAGATTCTTTCATACAGA

Function

GO: NA

KEGG:

id description
ko04120 Ubiquitin mediated proteolysis
ko03440 Homologous recombination

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822123.1 True 3027 mRNA 0.40 18 15193388 15203101

Neighbor

gene id symbol gene type direction distance location
LOC120572259 LOC104923984,LOC101469849,LOC100690576,LOC103363884 coding downstream 59502 15131461 ~ 15133886 (-)
LOC120572262 dmrta1 coding downstream 145701 15045857 ~ 15047687 (-)
LOC120573318 LOC100691113,LOC101468404,LOC102197824 coding downstream 148425 14915697 ~ 15044963 (-)
LOC120573638 NA coding downstream 995331 14147498 ~ 14198057 (-)
LOC120573258 ptprd coding downstream 1198800 13630824 ~ 13994588 (-)
mfsd8 mfsd8 coding upstream 696 15203797 ~ 15209767 (-)
LOC120572502 LOC102788115,LOC101471575,LOC102294957 coding upstream 13594 15216695 ~ 15226951 (-)
LOC120572736 LOC107094197,LOC101175051,LOC106520906,LOC106931240 coding upstream 31133 15234234 ~ 15243948 (-)
LOC120573428 LOC100691766,LOC101464677,LOC102785851,LOC102193527,LOC104952637 coding upstream 124355 15327456 ~ 15332663 (-)
LOC120572506 LOC104952638,LOC104923974 coding upstream 131989 15335090 ~ 15338220 (-)
G143292 NA non-coding downstream 1227 15189996 ~ 15192161 (-)
G143281 NA non-coding downstream 111358 15079305 ~ 15082030 (-)
LOC120573482 NA non-coding downstream 119196 15070511 ~ 15074192 (-)
G143218 NA non-coding downstream 504584 14681151 ~ 14688804 (-)
G143202 NA non-coding downstream 576827 14613684 ~ 14616561 (-)
G143317 NA non-coding upstream 73612 15276713 ~ 15286398 (-)
G143344 NA non-coding upstream 110864 15313965 ~ 15316787 (-)
G143348 NA non-coding upstream 130782 15333883 ~ 15334788 (-)
G143356 LOC100690702,LOC103375269,LOC102194098,LOC101464393,LOC102785273 non-coding upstream 160494 15363595 ~ 15365593 (-)
G143357 NA non-coding upstream 163681 15366782 ~ 15367391 (-)
LOC120572742 rbpms,LOC107086924,LOC107377421 other downstream 71432 15086865 ~ 15121956 (-)
rpl34 rpl34,LOC107566275 other downstream 2590715 12598753 ~ 12602673 (-)
G142916 NA other downstream 2778233 12413754 ~ 12415155 (-)
LOC120573137 ppp3ca,LOC103369319 other downstream 3129962 11994914 ~ 12063426 (-)
LOC120573414 LOC104960590,LOC106514884,LOC103390236,LOC107084127,LOC106908847,LOC101464045,LOC100704366,LOC102310755,LOC102193047,LOC102788271,LOC103369314,LOC103129513 other downstream 3257615 11910451 ~ 11935773 (-)
phf23b phf23 other upstream 493998 15697099 ~ 15702094 (-)
acap1 acap1 other upstream 816556 16019657 ~ 16043319 (-)
LOC120572710 nwd2 other upstream 1194832 16397933 ~ 16454928 (-)
LOC120572513 NA other upstream 2027498 17230599 ~ 17249632 (-)
tbc1d19 tbc1d19 other upstream 2531231 17734332 ~ 17753015 (-)

Expression


Co-expression Network