aco1 (aco1)


Basic Information

Item Value
gene id aco1
gene name aco1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 1749519 ~ 1774918 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822828.1
tgttgttgttgcagctgGCAGCGGACCATATTGGAACCAGGAGCTCTTGTATAAGACTAGCCTGCTGACAGTGTACAGATAACACACGGCCGTGCTCTGCGGTATCTCCTCTGCTGCACACATAAATCTGTACTGACACACAGAGGAGGATGTCTGCGACTGTGAATAATCCCTTTCAACATATAGTTGAGCCTCTGGACCCCACTGACCCAAATAAGCAGTTTTACAATCTTTCCAAACTCGGAGATCCAAGATATGATCATCTGCCCTTCTCCATCCGGGTTCTCCTGGAGTCTGCGGTCAGGAACTGTGATGGGTTTCTGGTAAAGCGCTCAGATGTCGAAAGCATCCTCAACTGGAAGCAGACCCAGACTCAAACTGTGGAGGTACCATTCAGACCAGCTCGGGTCATCCTCCAGGACTTCACTGGTGTCCCTGCAGTGGTGGACTTTGCTGCCATGCGTGATGCAGTGATGAAACTAGGTGGTGACCCAGAGAAGATTAATCCTGTTTGCCCTGCTGATCTCGTCATTGATCATTCCATCCAAGTGGACTTTAACAGGAAGTCTGATAGCCTTCAGAAAAACCAGGACTTGGAGTTTGACCGCAACAGAGAGAGATTTCAGTtcttaaagTGGGGCTCTAAAGCCTTCAGGAACATGCGGATCATTCCTCCTGGTTCGGGGATTGTTCACCAGGTCAACCTGGAGTACTTGGCTCGAGTGGTTTTTAACTATGCTGGGTACTTCTACCCTGATAGCCTGGTGGGCACCGATTCCCACACCACAATGATTGATGGGCTGGGAGTCCTGGGCTGGGGTGTGGGTGGAATTGAGGCGGAGGCTGTCATGCTGGGTCAGCCAATAAGCATGGTCCTGCCTGAGGTGGTGGGATACAAGCTGTCCGGGACCCCAGACAAGTTCATTACCTCCACTGACATTGTCCTCACAGTTACTAAGCACCTCCGTCAGGTGGGTGTTGTTGGGAAGTTTGTGGAGTTTTTTGGCCCAGGTGTTGCTCAGCTGTCCATTGCTGACAGAGCCACCATTGCCAACATGTGTCCAGAGTACGGAGCCACAGCAGCTTTCTTCCCCGTGGACAACGTCAGCATTCAGTACCTCAAGCAGACCGggagagaagcagagCAGCTGGCCTACATTACAAAGTACCTGAAGGCAGTTGCCATGTTCAGAGACTACAACGATGTCTCTCAGGATCCAGATTACACTCTGGTTGTACAGCTGGATCTGAGCACCGTGGTTCCATGCTGCAGCGGCCCCAAAAGACCTCAGGACAGAATTGCTGTGTCTGACATGAAAACCGACTTTGAAACCTGCCTGGGAGCAAAGCAAGGTTTCAAGGGTTTCCAGGTGGCTCCGGAGCGTCACGGCACTGGGGTCCCCTTCCAGTTTGATGGGAAAGAGTATACGTTAAGCCACGGCTCTGTGGTCATCGCTGCCATCACCAGCTGCACCAACACAAGCAACCCATCCGTCATGCTTGGAGCCGGGCTCCTTGCAAAAAAAGCAATAGAGTGTGGCTTGAGTGTGAAGCCGTACATAAAGACCAGCCTGTCACCAGGCAGTGGCGTGGTCACCACCTACCTAAAGGAGAGTGGTGTTATGGACTACCTCTATCAGCTGGGCTTTGAGGTTGTTGGCTATGGTTGCATGACCTGTATAGGCAACAGTGGGCCACTCCCAGAGCCGGTGGTGAACGCCATAACCCAGgGAGATCTGGTTGCTGCAGGTGTCCTATCAGGGAACCGAAACTTTGAAGGGAGAGTCCACCCCAACACCAGAGCAAACTACCTGGCTTCTCCACCACTAGTCATCGCCTATGCTATAGCCAGCACTGTGAGGATAGACTTTGAGAAAGAGCCCGTTgCCATTAACTCTGAAGGCAAAGAGATTTTCCTGAGGGATATCTGGCCCACACGGGAGGAGATCCAGGCTGTGGAGAGAATGTTTGTCATCCCATCCATGTTCAAAGAAGTCTATGAGAAGATTGAGAAAGTGAATGAACGCTGGAACTCTCTGGTTGCTCCCTCTGACAAGCTGTATACCTGGGACCCCAAATCAACCTACATCAAGTCACCACCGTTCTTTGATGGTTTGACCAAGGAGCTGAAGCCACCCAAGTCCATACATGACGCCTACGTGCTGCTGAACTTTGGAGACTCTGTCACCACTGACCACATTTCTCCTGCTGGGAACATCGCCAGGAACAGCTCCGCAGCACGCTACCTGACCAACAGGGGTTTGAGCCCTCGTGACTACAACTCGTACGGCTCGCGTCGAGGTAACGACGATGTCATGGCCAGAGGGACGTTTGCCAACATCCGCCTCTTTAACAAGTTCCTCAACAAGCAGGCGCCACAAACCATTCACCTGCCAACTGGAGAAACGCTGGATGTGTTTGATGCTGCAGAGAGATACCAGCAGTCCGGCGTCCCTCTGCTGGTTCTCGCAGGGAAGGAGTACGGCTCGGGCAGCTCCAGAGACTGGGCAGCTAAGGGCCCCTTCCTACTGGGTATTAAGGCAGTTGTGGCAGAGAGCTATGAGCGGATCCACCGCAGTAACCTAGTTGGGATGGGAGTGATTCCTCTGGAGTATTTAGAAGGAGACACCGCTGACAGCCTGGGACTGACCGGCCGAGAGCGCTACACCATCCTCATCCCCGAGCAGCTCACGCCCCGGATGATAGTCGACGTCAAGCTCGACAGCGGGAAAACATTCCAAGTGCGGATGAGATTCGACACGGACGTGGAGCTGGCGTATTTCCGCCACGGAGGCATCCTCAACTACATGATCCGCAAGATGTCCGAAAACTAACACGCCAAGTACAGCACGGAGCCAGAGCAACACGTGTCATTTTCTAATTCTCAGCTGCAGTCTTAACATGACAGCAGTGTAACGGTTTACAGAAGAATAACGTCCAATCAATGTCCATGTACAGCCATTTACAAAGAGTTGATTTACAGCCAGAAAACACCGATGTTCTATTTTTTGAGAATGCTGCTACTTTCTTTAGTCGCTGAACAGACctgtgtgggggggaggggatatatatatatatatatatatatatatatataaacataaacacacacagtagatgCCATTACAACGTGGgtcttatttttgtcttttaggTCTTTATCAGTTATGATTATATTTGTTTGCCACTCTCTAGAGCTGTTAGGATTCCAGCCGCTGTGCTCAGTCAGTAGTACTACATGTAGGTTATCCCGTCAACCCCCCAACTGTTTCTATCCTTTTGGTGGGAATGTTCTCCTTGTTTCATTAGTGAATATTGCATTGGGTTGCTATATCTACATAGTTGCATTCAGTGTGATAATGCGTTGTGATCACAGTGCGCAGAAGGGTTACAATGGAGGTGGTGTTGTTAGATGAGCTCTTTTCAATATGCTTCCATATGTTTTTCATTCTCAAAAATCTCTACCAGcatcagaaaacacaaatggcCAATCACAGTAGCCGCCGTAGCCCCTTAAAGCAGAAGAAAGACTTACatctaggcatgggccggttaccggtttcaaggtaCACCAaggtttcaaaaccactaacattttctgtcaaaccgttcctaaggtatgagctgttttttcATGATTcttcaaggacagaaagtgcagtttagaaatccctctccCTTGTTTTTCAcccagacatttcaaaaataatacatttatagcTGTCATTGCAATACCGTGAACCTGTGGCATTTTTGTCAGAATCTCTCTTCCATCTTCAGCTGCTATGTTCAAGGTTCCCTGGGGAGTTTTGGACCTTTTTAGTAGCAATATAGAGAAAGGTTTTTGTGTAGCTCCTGTGCATGATGTGACGCGATACATATTCCAGTTAATAGTTTGACACTATTCCACTGATCAACAGGTGGCAGTAATGTGCAAATATATACAACAAAGGCAGGGAAGAAAAAGTTAGGAACCATTGATTAAAAGTCCACAGCAATGCCTTAGTTAGAAATGACGAAAAGACCCATGTTGTAATAATGCTGAAATCTTCTTTTAAAAATAAGGACCATGTTGAGATTCAATAATATATTATTCTTGACTTTGAGTGAACTTTATTTACATATCAGCTTTTAAGCCAATACAGATGAGAAGTCCTTGATGTGTTCAGAAATCCAGATCTTCCATGACTGTGATGAGGAAGATCTTGTGATATGATTGAAAGCTCCAGAGAAGCTACTGTATGGACCATGTGGTGAGGTTGTTAACTCAGGGATTATGTCGGTTATAATATTGGTGGTGCAGGACCCTTTTTAAATCATAAAGGAAGAAATTGAGTGTgtactagaggtgtgaatcttcactgatctcccgattcgattacgattatcatgtcttcgattcgatatcacgatgcatcaAATAAATtgttctattaaagccatgtaggatatttaattcatagct
>XM_039822829.1
CATATTGGAACCAGGAGCTCTTGTATAAGACTAGCCTGCTGACAGTGTACAGATAACACACGGCCGTGCTCTGCGGTATCTCCTCTGCTGCACACATAAGTGTTTGTTGCTTATATTTGTGCTTTAGATCTGTACTGACACACAGAGGAGGATGTCTGCGACTGTGAATAATCCCTTTCAACATATAGTTGAGCCTCTGGACCCCACTGACCCAAATAAGCAGTTTTACAATCTTTCCAAACTCGGAGATCCAAGATATGATCATCTGCCCTTCTCCATCCGGGTTCTCCTGGAGTCTGCGGTCAGGAACTGTGATGGGTTTCTGGTAAAGCGCTCAGATGTCGAAAGCATCCTCAACTGGAAGCAGACCCAGACTCAAACTGTGGAGGTACCATTCAGACCAGCTCGGGTCATCCTCCAGGACTTCACTGGTGTCCCTGCAGTGGTGGACTTTGCTGCCATGCGTGATGCAGTGATGAAACTAGGTGGTGACCCAGAGAAGATTAATCCTGTTTGCCCTGCTGATCTCGTCATTGATCATTCCATCCAAGTGGACTTTAACAGGAAGTCTGATAGCCTTCAGAAAAACCAGGACTTGGAGTTTGACCGCAACAGAGAGAGATTTCAGTtcttaaagTGGGGCTCTAAAGCCTTCAGGAACATGCGGATCATTCCTCCTGGTTCGGGGATTGTTCACCAGGTCAACCTGGAGTACTTGGCTCGAGTGGTTTTTAACTATGCTGGGTACTTCTACCCTGATAGCCTGGTGGGCACCGATTCCCACACCACAATGATTGATGGGCTGGGAGTCCTGGGCTGGGGTGTGGGTGGAATTGAGGCGGAGGCTGTCATGCTGGGTCAGCCAATAAGCATGGTCCTGCCTGAGGTGGTGGGATACAAGCTGTCCGGGACCCCAGACAAGTTCATTACCTCCACTGACATTGTCCTCACAGTTACTAAGCACCTCCGTCAGGTGGGTGTTGTTGGGAAGTTTGTGGAGTTTTTTGGCCCAGGTGTTGCTCAGCTGTCCATTGCTGACAGAGCCACCATTGCCAACATGTGTCCAGAGTACGGAGCCACAGCAGCTTTCTTCCCCGTGGACAACGTCAGCATTCAGTACCTCAAGCAGACCGggagagaagcagagCAGCTGGCCTACATTACAAAGTACCTGAAGGCAGTTGCCATGTTCAGAGACTACAACGATGTCTCTCAGGATCCAGATTACACTCTGGTTGTACAGCTGGATCTGAGCACCGTGGTTCCATGCTGCAGCGGCCCCAAAAGACCTCAGGACAGAATTGCTGTGTCTGACATGAAAACCGACTTTGAAACCTGCCTGGGAGCAAAGCAAGGTTTCAAGGGTTTCCAGGTGGCTCCGGAGCGTCACGGCACTGGGGTCCCCTTCCAGTTTGATGGGAAAGAGTATACGTTAAGCCACGGCTCTGTGGTCATCGCTGCCATCACCAGCTGCACCAACACAAGCAACCCATCCGTCATGCTTGGAGCCGGGCTCCTTGCAAAAAAAGCAATAGAGTGTGGCTTGAGTGTGAAGCCGTACATAAAGACCAGCCTGTCACCAGGCAGTGGCGTGGTCACCACCTACCTAAAGGAGAGTGGTGTTATGGACTACCTCTATCAGCTGGGCTTTGAGGTTGTTGGCTATGGTTGCATGACCTGTATAGGCAACAGTGGGCCACTCCCAGAGCCGGTGGTGAACGCCATAACCCAGgGAGATCTGGTTGCTGCAGGTGTCCTATCAGGGAACCGAAACTTTGAAGGGAGAGTCCACCCCAACACCAGAGCAAACTACCTGGCTTCTCCACCACTAGTCATCGCCTATGCTATAGCCAGCACTGTGAGGATAGACTTTGAGAAAGAGCCCGTTgCCATTAACTCTGAAGGCAAAGAGATTTTCCTGAGGGATATCTGGCCCACACGGGAGGAGATCCAGGCTGTGGAGAGAATGTTTGTCATCCCATCCATGTTCAAAGAAGTCTATGAGAAGATTGAGAAAGTGAATGAACGCTGGAACTCTCTGGTTGCTCCCTCTGACAAGCTGTATACCTGGGACCCCAAATCAACCTACATCAAGTCACCACCGTTCTTTGATGGTTTGACCAAGGAGCTGAAGCCACCCAAGTCCATACATGACGCCTACGTGCTGCTGAACTTTGGAGACTCTGTCACCACTGACCACATTTCTCCTGCTGGGAACATCGCCAGGAACAGCTCCGCAGCACGCTACCTGACCAACAGGGGTTTGAGCCCTCGTGACTACAACTCGTACGGCTCGCGTCGAGGTAACGACGATGTCATGGCCAGAGGGACGTTTGCCAACATCCGCCTCTTTAACAAGTTCCTCAACAAGCAGGCGCCACAAACCATTCACCTGCCAACTGGAGAAACGCTGGATGTGTTTGATGCTGCAGAGAGATACCAGCAGTCCGGCGTCCCTCTGCTGGTTCTCGCAGGGAAGGAGTACGGCTCGGGCAGCTCCAGAGACTGGGCAGCTAAGGGCCCCTTCCTACTGGGTATTAAGGCAGTTGTGGCAGAGAGCTATGAGCGGATCCACCGCAGTAACCTAGTTGGGATGGGAGTGATTCCTCTGGAGTATTTAGAAGGAGACACCGCTGACAGCCTGGGACTGACCGGCCGAGAGCGCTACACCATCCTCATCCCCGAGCAGCTCACGCCCCGGATGATAGTCGACGTCAAGCTCGACAGCGGGAAAACATTCCAAGTGCGGATGAGATTCGACACGGACGTGGAGCTGGCGTATTTCCGCCACGGAGGCATCCTCAACTACATGATCCGCAAGATGTCCGAAAACTAACACGCCAAGTACAGCACGGAGCCAGAGCAACACGTGTCATTTTCTAATTCTCAGCTGCAGTCTTAACATGACAGCAGTGTAACGGTTTACAGAAGAATAACGTCCAATCAATGTCCATGTACAGCCATTTACAAAGAGTTGATTTACAGCCAGAAAACACCGATGTTCTATTTTTTGAGAATGCTGCTACTTTCTTTAGTCGCTGAACAGACctgtgtgggggggaggggatatatatatatatatatatatatatatatataaacataaacacacacagtagatgCCATTACAACGTGGgtcttatttttgtcttttaggTCTTTATCAGTTATGATTATATTTGTTTGCCACTCTCTAGAGCTGTTAGGATTCCAGCCGCTGTGCTCAGTCAGTAGTACTACATGTAGGTTATCCCGTCAACCCCCCAACTGTTTCTATCCTTTTGGTGGGAATGTTCTCCTTGTTTCATTAGTGAATATTGCATTGGGTTGCTATATCTACATAGTTGCATTCAGTGTGATAATGCGTTGTGATCACAGTGCGCAGAAGGGTTACAATGGAGGTGGTGTTGTTAGATGAGCTCTTTTCAATATGCTTCCATATGTTTTTCATTCTCAAAAATCTCTACCAGcatcagaaaacacaaatggcCAATCACAGTAGCCGCCGTAGCCCCTTAAAGCAGAAGAAAGACTTACatctaggcatgggccggttaccggtttcaaggtaCACCAaggtttcaaaaccactaacattttctgtcaaaccgttcctaaggtatgagctgttttttcATGATTcttcaaggacagaaagtgcagtttagaaatccctctccCTTGTTTTTCAcccagacatttcaaaaataatacatttatagcTGTCATTGCAATACCGTGAACCTGTGGCATTTTTGTCAGAATCTCTCTTCCATCTTCAGCTGCTATGTTCAAGGTTCCCTGGGGAGTTTTGGACCTTTTTAGTAGCAATATAGAGAAAGGTTTTTGTGTAGCTCCTGTGCATGATGTGACGCGATACATATTCCAGTTAATAGTTTGACACTATTCCACTGATCAACAGGTGGCAGTAATGTGCAAATATATACAACAAAGGCAGGGAAGAAAAAGTTAGGAACCATTGATTAAAAGTCCACAGCAATGCCTTAGTTAGAAATGACGAAAAGACCCATGTTGTAATAATGCTGAAATCTTCTTTTAAAAATAAGGACCATGTTGAGATTCAATAATATATTATTCTTGACTTTGAGTGAACTTTATTTACATATCAGCTTTTAAGCCAATACAGATGAGAAGTCCTTGATGTGTTCAGAAATCCAGATCTTCCATGACTGTGATGAGGAAGATCTTGTGATATGATTGAAAGCTCCAGAGAAGCTACTGTATGGACCATGTGGTGAGGTTGTTAACTCAGGGATTATGTCGGTTATAATATTGGTGGTGCAGGACCCTTTTTAAATCATAAAGGAAGAAATTGAGTGTgtactagaggtgtgaatcttcactgatctcccgattcgattacgattatcatgtcttcgattcgatatcacgatgcatcaAATAAATtgttctattaaagccatgtaggatatttaattcatagct

Function

symbol description
aco1 Predicted to enable aconitate hydratase activity; iron-responsive element binding activity; and iron-sulfur cluster binding activity. Predicted to be involved in citrate metabolic process and tricarboxylic acid cycle. Predicted to act upstream of or within cellular iron ion homeostasis and response to iron(II) ion. Predicted to be located in cytoplasm. Predicted to be active in cytosol and mitochondrion. Is expressed in blood and presumptive blood. Orthologous to human ACO1 (aconitase 1).

NR:

description
cytoplasmic aconitate hydratase

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0051539 4 iron, 4 sulfur cluster binding molecular_function

KEGG:

id description
K01681 ACO, acnA; aconitate hydratase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822828.1 False 4465 mRNA 0.48 21 1749519 1774918
XM_039822829.1 True 4467 mRNA 0.47 21 1749519 1774892

Neighbor

gene id symbol gene type direction distance location
LOC120573508 LOC103361692 coding downstream 84574 1660137 ~ 1664945 (-)
slc1a1 slc1a1 coding downstream 175395 1550528 ~ 1574124 (-)
LOC120573289 NA coding downstream 249203 1492274 ~ 1500316 (-)
sorcs2 sorcs2 coding downstream 319802 1018258 ~ 1429717 (-)
LOC120573525 mrps28 coding downstream 835839 906545 ~ 913680 (-)
LOC120573473 NA coding upstream 108984 1883902 ~ 1885687 (-)
LOC120572242 NA coding upstream 244694 2019612 ~ 2022367 (-)
pde5ab pde5a coding upstream 904027 2678945 ~ 2797531 (-)
si:dkey-219e21.4 NA coding upstream 1037637 2812555 ~ 2818659 (-)
c14h4orf54 NA coding upstream 1342316 3117234 ~ 3128616 (-)
G140514 LOC106908230,LOC105925506,LOC101079287,LOC100690429 non-coding downstream 24186 1719925 ~ 1725333 (-)
G140492 NA non-coding downstream 86267 1663021 ~ 1663252 (-)
G140454 NA non-coding downstream 218569 1530235 ~ 1530950 (-)
G140451 NA non-coding downstream 227680 1519821 ~ 1521839 (-)
G140437 NA non-coding downstream 266814 1481738 ~ 1482705 (-)
LOC120573239 NA non-coding upstream 919 1775837 ~ 1782596 (-)
G140534 NA non-coding upstream 12386 1787304 ~ 1788089 (-)
G140535 NA non-coding upstream 15792 1790710 ~ 1790942 (-)
G140536 NA non-coding upstream 16122 1791040 ~ 1791662 (-)
G140548 NA non-coding upstream 37602 1812520 ~ 1839129 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other downstream 100087 1623259 ~ 1649432 (-)
tada2b tada2b other downstream 261093 1482789 ~ 1488426 (-)
G140274 NA other downstream 1297849 443550 ~ 451670 (-)
LOC120573528 NA other upstream 152214 1927132 ~ 2032506 (-)
G140615 NA other upstream 276563 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 679148 2454066 ~ 2573483 (-)
arsj arsj other upstream 822916 2597834 ~ 2622100 (-)
LOC120573530 NA other upstream 1364203 3139121 ~ 3143189 (-)

Expression


Co-expression Network