plaa (plaa)


Basic Information

Item Value
gene id plaa
gene name plaa
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 12216715 ~ 12222464 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822933.1
TCAGTGACGTCATTCAACTTCCGCTAGCATTAGCGGCCGGTGTTTGTTGACAGCAACGCCGCTTAGCATAACTCTACTGTGGTAGTTTCATCGTGTTGTCGGGTCAAAATGGCATCATCGAACTCATACAGACTCAGCTGCTCCATCCCGGGCCACGAAATGGACGTCAGGGGACTCGCATCTGCTGTTTTTCCAGAGGGagcttttgtgtctgtgtccagaGACCGAACCGGAAGAGTCTGGGTCCCAAACTCAAGCCCAGACAAAGGTTTCACAGAGATGCATAGTATGTCTGGCCACTCCAATTTTGTATCCTGTGTATGCATCATTGCACCTAGTGAAACATATCCTCGAGGACTCATTGCCACAGGTGGAAATGataataacatatgtgttttCACAATGGACCAATCACAGCCGCTCTTCACTCTCACGGGTCACAAAAACACAGTTTGCACTCTGTCTTCTGGGAAGTTTGGGACACTTTTGAGCGGTTCCTGGGACACCACAGCCAAAGTCTGGCTCAATGAGAAGTGCATGATGACCTTGCAGGGCCACTCTGCAGCCGTGTGGGCAGTGGTCATCCTGCCTGAACAAGGCCTTATGCTGTCTGGATCAGCAGATAAGACCATAAAGCTTTGGAAAGCTGGCCGTTGTGAGAAGACATTTACAGGCCATGAGGACTGTGTAAGGGGACTGGCAGTGATCAGCAACATTGAGTTCTTCTCTTGCAGCAATGACACAAGTATCAGAAGGTGGCTGGTGACAGGCGAATGTGTACAGGTCTATTACAGCCACACCAACTACATCTACAGCTTAGCTGTCTTCCCCAATAGCCaagATTTCATAAGCACAGGAGAGGACAGGACATTGAGGATATGGAGGCAGGGAGAGTGCTCTCAGACAATCCGTCTGCCTGCCCAGTCTGTCTGGTGCTGCTGCATTCTACCTAATGGTGATATAGCTATCGGGGCCAGTGATGGCATTATCCGCGTGTTTACGGAAGCTGAGGACCGCATAGCGAGTGCAGAGGACCTGCAGGCTTTTGAGGATGAACTCGCCAAAACCACCATTGACCCCAAGACAGGCGACTTTGGCGACATTAAAATGGAGGACCTTCCTGGAAGGGAACACCTTGTTGAGCCTGGGAATCGTGACGGACAGACGCGTCTGATTAAAGATGGACAGAAGGTGGAGGCGTATCAGTGGAGTGTCAGTGATGACCGCTGGATGAAAATCGGAGATGTGGTCGGAGGCTCAAACCAACAGACTTCCAAGAATGTGATGTATGAAGGAAAGGAATACGACTACGTCTTCACCATTGACGTGAATGAAGGAGGGCCGTCCATGAAGCTGCCTTACAATGTGTCAGAGGACCCTTGGCTAACAGCGCACAACTTTTTGCAGAAGAATGACCTCAGCCCCATGTTCCTCGACCAGGTCGCCAATTTTATAATAGAGAACACCAAAGGACATGTGGTGGGACCAGCCCAGCCGGCTGGTGGTGACCCATTCACTGGAGGAGCTCGGTATATCCCCGGGGCTTCTGATGATGGACGCGGCTTTGGAGCTGATCCTTTCACGGGCTCCGGTCGCTACATCCCAGGGTCGGGTCCAAACCCAAGTGCTCCTTCAGGTGTGGCAGACCCCTTCACAGGAGGAGGTGCCTATTCCTCAGCAGCCCTCAGACAGACGGCAACTAACATCTACTTCCCCAAGACCGATGGTGTGACCTTTGAGCAAGCCAATTCCTCGCAGATCATTGCCAAGGTAAAGGAGCTAAATGGAGGTGCCCCTCCGGAGCACAAGCTTTCTGAAGAGATTCTGGAAAGCCTTCAGAGGCTGCTGGTGTCTGTCTCTGAGCCCAACTCCTCCATGTCTCCCCCAAGCATCCAAGAGATCAACGTGCTGTGGAAGGCCTCTCACTGGCCTGAAGACCTCGTGTTTCCTATCCTGGACATTATGAGGCTGGCAGTGCGCCACCCACAGGTTAACGAGACTCTCTGTGGAGAGGCAGAGGGAGTCCAGCTGTGCAACCACCTGCTGAGCCTGATGAGGCCTGAGGGGCGTCCTGCCAACCAGATGCTGGCGCTGCGGACTCTGTGTAACTGCTTTAGCGGCAGGCACGGCCGAGCCCTCCTCATGGCCCAGCGTGAAACCGTGCTATCACATGCTGCCGACCTGGCCACAATCTGCAATAAGAACATCCACGTTGCTCTGGCCACTCTGTTGCTTAACTACGCTGGCTGCCTGCACAGCCAACCCGATCTCGAGGCCAAGGCCCAGTGCCTGTCTGTGGCCAGTAGAGCTCTGGAGACGGTACAAGACAAGGAGGCTGTGTTTAGGCTGCTGGTGGCCTTGGGAACCACTGTGGCCTCAGACCAGACAGCCCAGGACCTGGCTCGCTCCCTGGGGGTCAACTCTCAGATTTCCAAGTACTCATCAGTGTCTGATCCATCTAAGGTGGCCGAGTGTTGCCAGCTGGTTTTAAAAGAACTACAATGATGTAAatgattagaaaaaaagagcacTTGTTTCTTACTATCACTCTGTTCTGACTAATCAGTTGTAGTGGAGACTTAAATACTTGTATGttctgcaataaaaaaaaaaggacaaatgaAATCTGCA

Function

symbol description
plaa Predicted to enable ubiquitin binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and ubiquitin recycling. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including eye; ovary; pectoral fin musculature; solid lens vesicle; and trigeminal placode. Orthologous to human PLAA (phospholipase A2 activating protein).

NR:

description
PREDICTED: phospholipase A-2-activating protein

GO: NA

KEGG:

id description
K14018 PLAA, DOA1, UFD3; phospholipase A-2-activating protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822933.1 True 2631 mRNA 0.52 14 12216715 12222464

Neighbor

gene id symbol gene type direction distance location
LOC120572498 NA coding upstream 121322 12066884 ~ 12095393 (+)
LOC120573488 NA coding upstream 360361 11788242 ~ 11856354 (+)
LOC120573489 LOC103363230,LOC103154086 coding upstream 524113 11535678 ~ 11692602 (+)
si:dkey-19b23.10 NA coding upstream 690460 11507931 ~ 11526255 (+)
slc3a2a NA coding upstream 721485 11488831 ~ 11495230 (+)
haus6 LOC104966446 coding downstream 818 12223282 ~ 12230356 (+)
LOC120573732 NA coding downstream 5273 12227737 ~ 12227867 (+)
dennd4c NA coding downstream 8898 12231362 ~ 12274262 (+)
cdca9 NA coding downstream 65758 12288222 ~ 12290407 (+)
LOC120572184 adamtsl1 coding downstream 84604 12307068 ~ 12404577 (+)
G142825 NA non-coding upstream 2199 12213435 ~ 12214516 (+)
G142822 NA non-coding upstream 16839 12199653 ~ 12199876 (+)
G142815 LOC101062179 non-coding upstream 69459 12144976 ~ 12147256 (+)
G142639 ddit4l,LOC102788552 non-coding upstream 221494 11970329 ~ 11995221 (+)
G142640 NA non-coding upstream 225466 11927805 ~ 11991249 (+)
G142832 NA non-coding downstream 54098 12276562 ~ 12276849 (+)
G142908 rpl34,LOC102777881,LOC107566275 non-coding downstream 376289 12598753 ~ 12602722 (+)
G142987 NA non-coding downstream 554145 12776609 ~ 12815825 (+)
LOC120573367 NA non-coding downstream 823257 13045721 ~ 13062642 (+)
LOC120572258 NA non-coding downstream 1184573 13407037 ~ 13411610 (+)
G142598 LOC104947722,LOC102192171 other upstream 753304 11461309 ~ 11463411 (+)
trnai-aau_25 NA other upstream 757476 11459166 ~ 11459239 (+)
trnai-aau_24 NA other upstream 758285 11458357 ~ 11458430 (+)
LOC120573186 LOC108242886 other upstream 908417 11204642 ~ 11308298 (+)
zgc:101765 LOC104948199,LOC103360918 other upstream 1039674 11167406 ~ 11177041 (+)
LOC120573230 col25a1,LOC102793499 other downstream 201839 12424303 ~ 12577034 (+)
etnppl etnppl,LOC104966525 other downstream 356491 12578955 ~ 12593799 (+)
ppargc1a ppargc1a other downstream 535232 12757696 ~ 13035112 (+)
G143326 NA other downstream 3092286 15314750 ~ 15321516 (+)
LOC120573218 ctdnep1,dulda,LOC106577558 other downstream 3483357 15705821 ~ 15715848 (+)

Expression


Co-expression Network