znf16l (LOC103362116,LOC104940792,LOC101479721)


Basic Information

Item Value
gene id znf16l
gene name LOC103362116,LOC104940792,LOC101479721
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 5114994 ~ 5119327 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039822976.1
CCTAACTACTGTCTTTCAGCATCATCCAAACATTAGCTTGTTGGTTAGCTTTTCAGCTAGCCAAACTCTTAGGAAAAATAGAGCTCCTAGCCAAGCTAATCTATGAGTCGCAAACGAAACCACAGTTTCGCTGAAACGAGCCTGTCTCCTGAACTCCACGGTGCCTTCATGGAGCCTCCCGGTTCAGCGAGCCGAGGCGACGGCGATTTCCTGGAGCTGGAGCACGACGAGGAGCTGCTCTGCTCGGTCAGCGACATCACCGAGCACCTCGGCAGAAATATCACCGTGGTGCTGGAGACAGCGCTGTCTGAGATCCGCAAAATGGTCAGCATCAGGATACGAGTCCTGAAAATGGAGCTGCGCGAGAAAACCGAAGAAATTGAAGTCTTAAAGGCGAGACTAGATACAGTCCAGCGGGATGGCAGGGAGCCTTTCCCCGGCGTTACGACCATGGAGCCGTCTGCAGATGCTGGCTTCAAGAAACATGACTTCAGCTCAGGCACCAAACACAATAGTATCGACCCAAGGAGAGCCAAGGCTGTCATGCCGGGTGTGAAGAAGGAGAATATAGATGCTATTTGCGACTATCTGATGAAAGACAAGAACTCGAGGGGGTGTGCTGAAATGGACGCAGACCAGAGCAGCCAAGCCAGCGGCGACCGGGAGCCTCGCCAAGATCCGGACCCGCACTCCCTCAACCTGTGGCCCGACAGCGGCATGGCTGGCTCCGGGCACGGGCACGGAGACTCCGAGTCCACCACAGATGACCTGTTCAGTATGCTCCCGTCTGGCAGCAAACGGATGTATGACTACGAATGGATAGCACCAATGGATTATTCTTCAGACCTGAAAGTTCTGAAGGAGCCGGAGTGTGAGAGCAGCCCGACGGCCCCGACCGAGGACGATGAGGAAGAAGAGTCGCCGAGGAGGGACGGGGGAGTGCTGGAGCCGGCCCAGGCCCCGCTGTCGCACGTCCATCCATCAGAGTTCTCCATGGAGCCCCAGAGCTCTccgggggagggagggagtccCTTGCAGGGCAGCACAGACAGGCCTGTGGCAGGCCAGCAGTTCCCCGGCCACACCTACATCTGCTCTCTGTGTGGAACCTTCTGCCCCGACTCTGTGTTCCTAGAGGAGCATGTCAAACTGATACACTCGGACTCTGCCGGCGCCCAGGCTCTCCAGGCCCTGCAGTCCACCTGCTCGGCGGCGCCCGCCATGGGGGACGGCAGCGCTGACCCGAGGAGGGGCGGCGGCGGCGGGGGGCAGAGCGAGGATGGCACAGGGGCAGGGGCTGGCGGTGGTGGCATGGCGCGGGGAGCGGCACCTGTGAAAAAGGAGATTAAAATCGAGGGCGGGTACGAGTGCGGGGACTGCGGCCGCCGTTTCAACTACCTCGGCAACCTGCGGCAGCACCAGCGCATCCACACCGGGGAGAAGCCCTTCATGTGTCCCGAGTGCGGGGAGCGCTTCCGCCACGCCGCCCGCTTAAAAAGCCACCGGCTGGTGCACAGCAGCGCCCAGAGCCCCTTCCCGTGCCCCCAGTGCGGGAAAGGCTTCTCAGTGCTGTCGGGACTCAAGAGACACCAGCGGGTGCACACGGGCGAGAGCCCGTACGCCTGTCCACAGTGCGGCCGGCGCTTTAAGGAGCTGGGGAACCTGTACACCCACCAGAGGATCCACAGCGGCGCCACGCCCTACTGCTGCCAGCAGTGCGGCCGCAGCTTCCGCCACCTGGGGACGTACAAGAGCCACCGCTGCACGCCGCTAGGGGTGTAAAtcataagttttttttttaaatcacgatacaatattatattgattctttggacaacGGTCGGATGTTAGCCGATATCTCAAAGTCTGTCGCGATACGATGGCCATTCAATTCAGGGGCCTGCGATCGATATGAGACGACATCATGCACCCATTTAACACAGTCACACTACACTAAAAATATGATTAGGATCGGGCATcggttagggctgcacgatacgaggaaaatatgcgatgacgttgttgaatatcgcgataacgatattacttgcgataaataaacagatattaaagtgtgctcaattctgcatttctgctgctcttAGTATTCTGCTAATTACAACAAATCGCtagttgaatttaaaacagaggaaatcatttccaacatcttttcattgaacaaattgaagattgaattgaacataaaaggcaccacgatgacgataaaaaaacgaTATAGTGTGCAGCCCTAGCATCGAGAACTGGTTCAGAAATTACGATTCCAACTTTTGGAAACGTTTGGAAAATGTGGGTTTGAATCCGATCGTCGGTTCCAAATTGAACACAGGCAAGTTTTGGGGTTCGTAGCGACCGCCGTACTTCCAGGCttcttgttgtgttgcagccatggagcacagtaagcggcgctctaatGTGTGGCTTTATtctacatgtaaaaaaaaaacaaagcccgtcaaaataaaaccttcctcttatctgtgaaataagcatgtgacccgtttcaactccactgCTCAAAAGAATCGATAAGAATCGGAATttgaatcagaattgttaaaggggtgatagaatgattatatagggtatttcacactgttccttatggtc

Function

NR:

description
PREDICTED: zinc finger and SCAN domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039822976.1 True 2628 mRNA 0.54 3 5114994 5119327

Neighbor

gene id symbol gene type direction distance location
sstr1b LOC104956125,LOC103370120,LOC106577512 coding downstream 30603 5038118 ~ 5084391 (-)
ecsit NA coding downstream 586982 4518376 ~ 4528012 (-)
si:dkey-106g10.7 LOC103359705 coding downstream 616787 4486570 ~ 4498207 (-)
men1 men1 coding downstream 667644 4435605 ~ 4447350 (-)
map4k2 map4k2 coding downstream 681111 4381783 ~ 4433883 (-)
LOC120573313 acox3 coding upstream 93811 5213138 ~ 5244957 (-)
LOC120573316 acox3 coding upstream 200470 5319797 ~ 5335717 (-)
LOC120572332 NA coding upstream 299146 5418473 ~ 5423102 (-)
med11 med11,LOC102785859 coding upstream 497350 5616677 ~ 5620265 (-)
rnaseka LOC101070669,LOC104937157,LOC103362101 coding upstream 558889 5678216 ~ 5684661 (-)
G141233 LOC104947167 non-coding downstream 36778 5077628 ~ 5078216 (-)
G141224 NA non-coding downstream 78797 5035502 ~ 5036197 (-)
G141222 NA non-coding downstream 91909 5022593 ~ 5023085 (-)
G141214 NA non-coding downstream 167015 4944049 ~ 4947979 (-)
G141212 NA non-coding downstream 179493 4935282 ~ 4935501 (-)
G141259 NA non-coding upstream 88910 5208237 ~ 5208460 (-)
G141394 NA non-coding upstream 464835 5584162 ~ 5584526 (-)
G141416 NA non-coding upstream 592107 5711434 ~ 5711716 (-)
G141467 NA non-coding upstream 850624 5969951 ~ 5970613 (-)
G141468 NA non-coding upstream 851608 5970935 ~ 5971387 (-)
G141234 NA other downstream 14912 5099705 ~ 5100082 (-)
G141219 NA other downstream 154989 4958679 ~ 4960005 (-)
peli3 LOC100695529,LOC102800049,LOC102202559,LOC103148873,LOC106956141,LOC107098130,LOC103480122 other downstream 285832 4773628 ~ 4829162 (-)
G141145 NA other downstream 450796 4641495 ~ 4664198 (-)
G141159 taf6l other downstream 453883 4660621 ~ 4661111 (-)
nat16 nat16 other upstream 305234 5424561 ~ 5475155 (-)
cd99l2 cd99l2 other upstream 440699 5560026 ~ 5582995 (-)
G141400 NA other upstream 477631 5596958 ~ 5600462 (-)
G141439 NA other upstream 624232 5743559 ~ 5843146 (-)
gal3st4 gal3st4,LOC104939968 other upstream 1058594 6177921 ~ 6220260 (-)

Expression


Co-expression Network