nectin4a


Basic Information

Item Value
gene id nectin4a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 7757759 ~ 7780739 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823362.1
agagagagagagagagacagagagaaaggtgCAGCACAAACAGGTGTATCCCAAACAGGTAAAGCTGCTCCTTCTTTTTCCTAAAGGGCAAACATGCTGGCGTGTGCTTGACAAACCAACACCTAAGCACCCTGAGAggatttgcacttttttttcttccacaagGACTGAGTTTATACAACAGGACAGGGCTTTGGAAGGGATCAAGGATGGAGGCATGAGTCCGCCCTCGGTGCTTGATGCATATACCTCTCATTAAGGATACCATTACCTGGACTGATGAGCTTCATTTCGGCGCTGAAATCGTCCCAGCTTGCGCGCGGTTAACTGCCGAGGAGAATGTCACCTCTGCTGAACAGACTGTCtgggtgtctctgtgtcctctggaTCTTTGTTACAATGATACAGGGAGACTTTGTGGATGTGCCATCAGAGGATCCCATCCGCTCCTTGGCAGAGGTCAAGACCACCCTGCCCTGTCTCTACCAGCCGACTGGGACAGACACTGTGGTGCAGGTCACCTGGTATAAGGAGAAACCCGATGCCACCAAAGAGCAGATCATCACTGCACACTTCACTGATGGACAGACAGCGTTTGGGATGTGGTCTCGACGTGTGCACTTCAAAAGCACCAAACCCACCGTGGACTCGTCTCTGGTCATCGTGAGCACAGAGGTCTCCGACGAGGGGAAATACCTGTGCCGCGTCATCACCTACCCCTCCGGCAACTTTGACAGAGAGATGTCCCTCATCGTGTGGACCGTTCCTATCTCCACCCTGGACCCTGTGATTCTGGTGGAGGGACAGTTCTTCCAGCTGGCCGCTACCTGTCGCTCTATAgcccacccccctccccagcTCTCCTGGGACACCGACCTGACTGGCCAGTCCAGCAATCGCTCCTCCAACAACGGTGCGGTCTCCTCGCAGTTCTCCCTGCACCCACTGAGGAGCATGAACGGCAAGAAGCTGGACTGCCTGGTGTGGCATCCCACTTTGGAGGGCCCCCGCCGGTTCAGCAACAAGCTGGTGGTGCACTTCCCTCCACATGCAGAGGTGTCTGGCTACAACGGAGACTGGTCTGTGGGTATGGAGAATGCTGCCCTGAGGTGCGTGAGTGGAGGAAACCCCAAACCGAGTTTCACCTGGACCAGAACTGGGGGACAGTTGCCGGAAGGTGTGATCCCCCACCCTAATGGAACCCTAGTTTTTGGACGACCCCTGGACTCGTCAGATGGAGGCACCTACCTGTGTGAGGTGAAGAATGACGTGGGACAAGGGACAGCGCAGGTGGAGATTACTGTGGCAGAATCTGACCCAAGGAAGGGTGTAACGGAAAACAGCCTGATGATCATCGTGGGGGGCGTGGCTGGGGGGCTGCTAATCTTGATGCTCATCGTCATCATCACTGTCACTTGTCATCACAAACGCAGGAACAAGAAGCTGGAGAGGGAGCTGACTGAGAGGAAGGAGGAAATAAGCACTCTCACCAGGCAAGCTTCTTTCAGGAGAATGAACTCCGTCAGCACAGACGCCAGAGGAGCGACAGAGGAGAACATCCCTCTGAGGGTGGAGGGAACCATAAGGACCAGCATGTCTTCCCTCGGGGAGGCTCACTGCCGTGACAGCCGATCTACTATCTCAGGTGGACGGGGAGGAGGGGTAGCGTTTGACCAGCTGGGCAGGTCAGTCCTGCATAACAACTCGCGGAGGGGACGGGACAGGCTTCCGGATAGAGAGGAGGAGAACCGATTTAGAGTGGAGACATACGTGAGAAACAGCGCTATGTCTTTGCAGGAAACTCGTTTCCACCCTCCTCTGACGCCATCGACCTTCCCGAAGGTACAGTCCATTGATGTCGTAAGACAGCTAAACGGCAGCGCCATTATCCCATCTGATGGGGGTTCAAGGCCAGGAAGTGTTACCAAGACTCACCAGCACCTTCCTTTGAGCTCCGACTACCCACGGGTAACAGATGATGAGGATGAAGTAGATGAAGGTCTGGGGGGTCCCGCCAGTCAGGAGCATCCCGATGACCAAGACAGCGAGACCAACAGCTCCCAGGTGTCCGAGGCTCACAGCACCCGCTATCTGCAGACTAACGGCACACTCAGACCCAAACCCCGGCCAAGCCCCATTGTGGTCAGCCCCCACGCCTCCCTGATCCACAAGGCGCAGATAGTTTAGCAGGAAGCTGGGAAAATAACATGTGAAACTACAAGAATGGACAGTTCTGGTTTTGGAGGTGGTTCAAACGTGGCTACGCGGACAAAGTTGGCCCAGGAAACCATGCAGTTTATGGTCAATTATGAAAAATCTGCCCCTTGACTGCAATGCTGCTTTTTCCTTATTGTGTGTGGGACATGATGCAATAGAATAAAGTCTTAAAAGGAACAATCTACTCTAAAGCATCTACTGGACATTTCTGGATATCTGATTTCTGCCTGATGTTTGGTGATCAACATTGTGTTGTGTATTCCCAAGAACTACTGGCACAAACTAAGACAATGTCGCAATATTTCCAGTGCAGCTATTCTACGGTTAATAGCAGACGATACTCTTTGCTCGTCTTTCGCAATGCAGTATCTGTTGCTCTGTAGCAGGGGAATGCAGTTGACATACCTTTTGTGTGGGATGTCGAAAGCAAGAACATCAGTAGGAAATCAGGAAAAAAGCAGCAGGAGAAGTAGAGGAGGCTTTGGGAAAAGTTGGTACATCAGAACTGTACATTGCAACACCTCGGTATGGAGGGTGGATTTTAGGCTGTTGTGGTGTTCAGTGTAGCAGTGACTGTGTCTGTGCTAAGTTCACCTTACACAACACGGTTTGGGATCTGATCCAAACCATGGGGTTGTTCCTCTCTTGCCACACCTGCAACATGCATACCTCCATGCTGTCATATTGTCCTTGTGCCCTTGTAAGCACTGAGACATTTGGAACAGATAAAGCCTTCATACAGCCAAAAATGTCGATACATCGAACAGCGATCTGTAAATCTGTGCAAatatgcaaaatgtttttttgaatgAATTATCTCTTTAAATCCCAATCATCAATACAGTACATAGTAAATCAGCTGACACATATagtagataaataaataattaacataCCCTGCTCCTGCTCCTATGTTTGCGAGAATGAAAGTTTTAACACTACATattaaacacgcacacacactaaataaatagaagtgtatatatgttgtgcacacaaatacacagtggATGAAAGCTGGAAAAGCTGCCATATGTTTGTAAAAGAcacttttatttcactttttttctactgcATTATGTGCTACTTTTGTGACTACActtgagagagacagaaaagctGCCACATCGCAGACATACTTatctgaacttttttttttttattattattttttattccaaGACAAGACAATGACTTTCCGTTTGCAGATTCTTAATATTGTCGCAAAATCAAGCACGTCTTATTTATCTGTAGATGAATAATAGTAGATAGCCTACAtgttgtatatactgtatatgcattgGGTTCTGTTACAGTTCTGAGATGAGAAGCAATGTGCCAAagggaaaatataaaaaaaaacatcacttttgcttttttttggcaaATATGAAGTATTATTTTGTTCTTCACACATGTATTACATTGTACTGTTTTGATTTGTGTTACCTTctgtaaatacaatacagaTATGCGACAGTTTGTGGCAAAGGCAATGTGCCATGATTTACCGTCAGCCAACAGGTAAAAGCAGCAGATGAATGGTAGGCCTATTATGTGTGAATGTAAGTTGTATTTGTTGCAGACAGTGCCCCCTGATGTGTACTGCTGGAAAGTGCAGGGATCTGAAAGCGCCTGCTGCAAAACTACAGAACTATGAAAGACTCTGGATTCCACTGTGATTTCGGAAAAATGATCTTCCGGGTCACTTGCCTggagtttcatttattttaagggCTATGTATGGGTATCAGCTTGTATTGATGGGTtgcaataaatgtgtttttgtaaatattG

Function

NR:

description
nectin-4-like isoform X1

GO: NA

KEGG:

id description
K06593 PVRL4; poliovirus receptor-related 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823362.1 True 4014 mRNA 0.48 11 7757759 7780739

Neighbor

gene id symbol gene type direction distance location
otub1b otub1,LOC102780151 coding downstream 905 7750308 ~ 7756854 (-)
cskmt mettl12 coding downstream 7913 7747779 ~ 7749846 (-)
LOC120573565 NA coding downstream 13723 7741232 ~ 7744036 (-)
nrxn2b nrxn2b,nrxn2,LOC106577539,LOC108427447,LOC102303057,LOC101464276,LOC102778344 coding downstream 362681 6725271 ~ 7395078 (-)
LOC120573537 NA coding downstream 1100309 6655956 ~ 6657450 (-)
ndufs2 ndufs2 coding upstream 7162 7787901 ~ 7795793 (-)
kirrel1a kirrel,LOC102307446,LOC102202990,LOC101467841,LOC102781300 coding upstream 16540 7797279 ~ 7835028 (-)
trnar-ucu_15 NA coding upstream 56482 7837221 ~ 7837294 (-)
LOC120573599 NA coding upstream 80981 7861720 ~ 7871073 (-)
dock11 dock11 coding upstream 93912 7874651 ~ 7961707 (-)
G141781 NA non-coding downstream 198585 7558812 ~ 7559174 (-)
G141778 NA non-coding downstream 235966 7521213 ~ 7521793 (-)
G141774 NA non-coding downstream 239002 7518509 ~ 7518757 (-)
G141773 NA non-coding downstream 239292 7518265 ~ 7518467 (-)
G141741 NA non-coding downstream 295286 7395159 ~ 7462473 (-)
G141912 NA non-coding upstream 63366 7844105 ~ 7846084 (-)
G141920 LOC102310269,LOC102201257,LOC102782862 non-coding upstream 197135 7977874 ~ 7978789 (-)
G141932 LOC104946620,LOC103361161 non-coding upstream 225089 8005828 ~ 8009859 (-)
G141974 NA non-coding upstream 300125 8080864 ~ 8081655 (-)
LOC120572408 NA non-coding upstream 441100 8221839 ~ 8222181 (-)
LOC120572295 rasgrp2,LOC104942268 other downstream 54141 7648972 ~ 7703618 (-)
tbc1d14 tbc1d14 other downstream 1341302 6375972 ~ 6416457 (-)
LOC120572256 NA other downstream 1386659 6353464 ~ 6371100 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other downstream 1441942 6308898 ~ 6315817 (-)
LOC120572220 NA other downstream 1526462 6221971 ~ 6231297 (-)
fcer1g NA other upstream 1172 7781911 ~ 7787667 (-)
LOC120573451 NA other upstream 60182 7840921 ~ 7937490 (-)
G141913 NA other upstream 154491 7935230 ~ 7987441 (-)
LOC120572400 NA other upstream 326908 8107647 ~ 8112684 (-)
LOC120573543 NA other upstream 551626 8332365 ~ 8335374 (-)

Expression


Co-expression Network