med11 (med11,LOC102785859)


Basic Information

Item Value
gene id med11
gene name med11,LOC102785859
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 5616677 ~ 5620265 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823379.1
CCGCAGGAGTTGTTTTTCGGAGAGCTGCTGGTTGTGGGCGGTGAATTCCTGGCCACTCATGGCGAACGAGCGGCTCCGAGCTCTGGAGGATGTGGAGAAGGAGATAGCGACGGTCATGCAGTGTGCCGGTAATATAGTTCTTGAACTCTCCAAAGACAAACACAACGCCAGCCTCCTGGACAGACAGCTGGTCCAGTTCCAGGCCTCCGTCAACCGGGTGGAGAACGAACTGAGCGGCCAGATCCGCTACCTCACCCAGGTAGCTACTGGTCAACCTCACGAAGGCTCCACTTACTCAGCCAGGAAGGACTGTCAGATGGCACTGAACCGAGCCGAGTACGCCAAAGTCAAACTGGGAGAACTGGGACGGACCTGCGAAGTCAtgctggagcagcagcagcagcagcagcagcagcagccatgagAGCTGAGAAGGGCTCACAGCGGCATTTCACCACTGGATCCACCACTGCAAAGAAACTCCCGCACGCGGTCTAACTTGCAAGAAAACAAATCAagtttaaccctctgaggaaaaaaaagacgCACCGGCGAGTCACCGCGATGTTTGAcaacactcctactcaaaaagggATATTACAAAACGTTGTTTAAATCATTTATTCACTATTTTGTTCATATATTAcgctacttttgtgaacccaagacttttgtGAACTTATTTCCACgcaccaaaacaattgagtgtaggtatgttttcccaagagatttgagaaataaCAGCGTGCGCGTTTTCGTTTTggcgcccatgttatccaatctgtccggCCACACCGGGCTGCAGCGATCGTTTCGGCGTCACCTATTTCTTATGCGAGCGACTGTGTCAGGGCCAAATGATCTCTTTATCCCTTTTGACCCATCCCGGGTCAAAACTgaaatttgtcactttttctgatgtttttggccCCTCCCCGGTTTACACTTCTTTTTACTGCCATGTATGAGCACCACTAACATCAAGTTATTACTAGTTTAACActcatttttggaattcattgTCAATATTATTTATAGGACATTATACCTGTTCCTGGAggtaaaaaaagcagaaattaggAATTATTCAGACTAATAATAAAGGGAGGATAATCCCAGAAGGGTATATGTCAACGGTCAGTCAGAGGGATAGTGTTTCGAAGCatttagatttctttttttttattcaaatgcaaaaaaaattgaACAAAACGCCCAAAATTCAATGAGTGTAGAGAGACGATCTTTTGTCGTACTTGCGTTGCGCGTTGTATGGAGTCATCCGTGCTATTTTTGGGTATTTACAATTAGGTagtaacaaagaaacccagattTCTGATATTTAGAAAAAGaccagaagacaacacaagggttatacACTGCTCTGGAACAAATGTGGACATCACTATACAGAAAGgggagtttgttctgaacattttgatatataaCCCATTGTGATCAGGTTATatgaacacaccaaaaaaaaaaaaaaaggagaat

Function

symbol description
med11 Predicted to enable transcription coregulator activity. Predicted to act upstream of or within regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Orthologous to human MED11 (mediator complex subunit 11).

NR:

description
PREDICTED: mediator of RNA polymerase II transcription subunit 11

GO: NA

KEGG:

id description
K15131 MED11; mediator of RNA polymerase II transcription subunit 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823379.1 True 1500 mRNA 0.45 3 5616677 5620265

Neighbor

gene id symbol gene type direction distance location
LOC120572332 NA coding downstream 193575 5418473 ~ 5423102 (-)
LOC120573316 acox3 coding downstream 280960 5319797 ~ 5335717 (-)
LOC120573313 acox3 coding downstream 371720 5213138 ~ 5244957 (-)
znf16l LOC103362116,LOC104940792,LOC101479721 coding downstream 497350 5114994 ~ 5119327 (-)
sstr1b LOC104956125,LOC103370120,LOC106577512 coding downstream 532286 5038118 ~ 5084391 (-)
rnaseka LOC101070669,LOC104937157,LOC103362101 coding upstream 57951 5678216 ~ 5684661 (-)
si:dkey-6n21.13 LOC104944656,LOC104937154,LOC102297111 coding upstream 107371 5727636 ~ 5735182 (-)
si:dkey-6n21.12 LOC102198682,LOC106632892,LOC104937153,LOC101478675 coding upstream 121056 5741321 ~ 5757820 (-)
ache ache coding upstream 164543 5784808 ~ 5821779 (-)
LOC120573667 NA coding upstream 221152 5841417 ~ 5865750 (-)
G141394 NA non-coding downstream 32151 5584162 ~ 5584526 (-)
G141259 NA non-coding downstream 408217 5208237 ~ 5208460 (-)
G141233 LOC104947167 non-coding downstream 538461 5077628 ~ 5078216 (-)
G141224 NA non-coding downstream 580480 5035502 ~ 5036197 (-)
G141222 NA non-coding downstream 593592 5022593 ~ 5023085 (-)
G141416 NA non-coding upstream 91169 5711434 ~ 5711716 (-)
G141467 NA non-coding upstream 349686 5969951 ~ 5970613 (-)
G141468 NA non-coding upstream 350670 5970935 ~ 5971387 (-)
G141470 NA non-coding upstream 369630 5989895 ~ 5992227 (-)
G141601 NA non-coding upstream 535787 6156052 ~ 6157413 (-)
G141400 NA other downstream 16215 5596958 ~ 5600462 (-)
cd99l2 cd99l2 other downstream 33682 5560026 ~ 5582995 (-)
nat16 nat16 other downstream 141522 5424561 ~ 5475155 (-)
G141234 NA other downstream 516595 5099705 ~ 5100082 (-)
G141219 NA other downstream 656672 4958679 ~ 4960005 (-)
G141439 NA other upstream 123294 5743559 ~ 5843146 (-)
gal3st4 gal3st4,LOC104939968 other upstream 557656 6177921 ~ 6220260 (-)
LOC120572220 NA other upstream 601706 6221971 ~ 6231297 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other upstream 688633 6308898 ~ 6315817 (-)
LOC120572256 NA other upstream 733199 6353464 ~ 6371100 (-)

Expression


Co-expression Network