LOC120573590


Basic Information

Item Value
gene id LOC120573590
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 600634 ~ 606718 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823400.1
AGCACGTTATCATGACCCAAGCATTAAACGCCAATCTGATTGGCCGAGGCAACACACCAAGCATTTGGCGCCTGTTTGGCTTTGGTTTCATGGAAGCAAAGGCCGCTCTTCTCTGTTTAGCCAAAGCGTTTTAAGCCGTCTCTGGATCAAACCATCGGTTTCCACTAAGTTGAAGTGTCCTTTTCATTTTGGATGTGGATTGAGGTATCCTGCCTTTTTAAGGAGCTAAACAAGGTCATGTACGCAAGGGCTGTTTGGAAGGAGGGTGAACAAGAGGAGGAGGGTGTAGTTCCTGACAATTGGATCGACAGGAACAAGAGAACCCTTAGATGGCCACATAATATGAGCACCACAAAAACGGAAAGAGCTCTAAGGGACAAAATTAACCCCCAGGATGACTGGATGACGTTCCcattaatcaaaataaaaatgacttcAGCTAAGCGTTGTGAATGCAACAACTACAACCTGACCAGTCAGGCAGAGGAGGACGATGAGGATGATGAGGGGCTGATTAAATTGATGAGAAAACGCACTAAAAAAGGACCTCCGGATGGTTTTGTAAGAAATGaattaacAGATTCAGATGAGGTGGAGAATGTTGGGGGTGACAATCTGCCCAAATGCCCTACTCCACCAAGGAAGCTGCAGTCCATTCAGGACCCCAACATGATGCACAATGCTTCCTCTGAAGATGAAGATATGTCTGTCCATGCGGAGCATGCTGACAGTTCTCGGGGCAGCGAAATGTCCACTCCTCACTCTGGACATCGATCCTCGACCCACCAAGTGAAGCCTGCCGATAGATCTCGTGGTAGGGAGATGACCGCTCCACACTTGTCTGGCCTGGTGGAGCGTGCCAATGGATCTCGGGGATGGGAAACATCGACACCCAaCTTTCAATATGCAAGCACAGCACCTCGGCACAGATACCGGTCGCCATCCAGATCTCGTAATGCAACAAGAGGTTGTGCCAGGGATGGCTATCGCTCCAGGTAAAGAAACAGGATAAGGCACAG
>XM_039823401.1
AGCACGTTATCATGACCCAAGCATTAAACGCCAATCTGATTGGCCGAGGCAACACACCAAGCATTTGGCGCCTGTTTGGCTTTGGTTTCATGGAAGCAAAGGCCGCTCTTCTCTGTTTAGCCAAAGCGTTTTAAGCCGTCTCTGGATCAAACCATCGGTTTCCACTAAGTTGAAGTGTCCTTTTCATTTTGGATGTGGATTGAGGTATCCTGCCTTTTTAAGGAGCTAAACAAGGTGGTGTGCAGTGTCCTTTTCATTTTGGACGTGGAGTGAGGTGTCCTGTCTTTTGGGAGCTAAACAAGGTCATGTACGCAAGGGCTGTTTGGAAGGAGGGTGAACAAGAGGAGGAGGGTGTAGTTCCTGACAATTGGATCGACAGGAACAAGAGAACCCTTAGATGGCCACATAATATGAGCACCACAAAAACGGAAAGAGCTCTAAGGGACAAAATTAACCCCCAGGATGACTGGATGACGTTCCcattaatcaaaataaaaatgacttcAGCTAAGCGTTGTGAATGCAACAACTACAACCTGACCAGTCAGGCAGAGGAGGACGATGAGGATGATGAGGGGCTGATTAAATTGATGAGAAAACGCACTAAAAAAGGACCTCCGGATGGTTTTGTAAGAAATGaattaacAGATTCAGATGAGGTGGAGAATGTTGGGGGTGACAATCTGCCCAAATGCCCTACTCCACCAAGGAAGCTGCAGTCCATTCAGGACCCCAACATGATGCACAATGCTTCCTCTGAAGATGAAGATATGTCTGTCCATGCGGAGCATGCTGACAGTTCTCGGGGCAGCGAAATGTCCACTCCTCACTCTGGACATCGATCCTCGACCCACCAAGTGAAGCCTGCCGATAGATCTCGTGGTAGGGAGATGACCGCTCCACACTTGTCTGGCCTGGTGGAGCGTGCCAATGGATCTCGGGGATGGGAAACATCGACACCCAaCTTTCAATATGCAAGCACAGCACCTCGGCACAGATACCGGTCGCCATCCAGATCTCGTAATGCAACAAGAGGTTGTGCCAGGGATGGCTATCGCTCCAGGTAAAGAAACAGGATAAGGCACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823400.1 False 1019 mRNA 0.48 11 600634 606718
XM_039823401.1 True 1087 mRNA 0.48 12 600634 606718

Neighbor

gene id symbol gene type direction distance location
LOC120573587 NA coding downstream 462397 135443 ~ 138237 (-)
LOC120573525 mrps28 coding upstream 299827 906545 ~ 913680 (-)
sorcs2 sorcs2 coding upstream 411540 1018258 ~ 1429717 (-)
LOC120573289 NA coding upstream 885556 1492274 ~ 1500316 (-)
slc1a1 slc1a1 coding upstream 943810 1550528 ~ 1574124 (-)
LOC120573508 LOC103361692 coding upstream 1053419 1660137 ~ 1664945 (-)
G140291 NA non-coding downstream 43967 556402 ~ 556667 (-)
LOC120572316 NA non-coding downstream 77576 500240 ~ 523058 (-)
G140285 NA non-coding downstream 101018 499258 ~ 499616 (-)
G140275 NA non-coding downstream 157619 442656 ~ 443015 (-)
trnal-aag_5 NA non-coding downstream 173150 427403 ~ 427484 (-)
LOC120573382 NA non-coding upstream 18495 625213 ~ 626442 (-)
G140307 NA non-coding upstream 26009 632727 ~ 632947 (-)
G140308 NA non-coding upstream 26928 633646 ~ 633845 (-)
G140314 NA non-coding upstream 139870 746588 ~ 746860 (-)
G140338 NA non-coding upstream 269104 875822 ~ 876346 (-)
G140274 NA other downstream 148964 443550 ~ 451670 (-)
tada2b tada2b other upstream 876071 1482789 ~ 1488426 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other upstream 1016541 1623259 ~ 1649432 (-)
LOC120573528 NA other upstream 1320414 1927132 ~ 2032506 (-)
G140615 NA other upstream 1444763 2051481 ~ 2058191 (-)
camk2d1 LOC100695450,LOC101472930 other upstream 1847348 2454066 ~ 2573483 (-)

Expression


Co-expression Network