LOC120572441


Basic Information

Item Value
gene id LOC120572441
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 2908630 ~ 2910625 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641447.1
AAGAGATAGCCCAGCAATCAAATCCTTCCTTTATCAGAATCCAAGGCTGCATGAGGGGAAAATTATCATATTCAATGTCCTTTGGGACTGATAAgtcaaggaggaggaggggttgAGGGTGGTTTGTAGGGGGGATGAACTTGAAAGCTGACCATTGGATGTTTTACTGAGGAATGACAGCCCTGGCTGAGCAGCTGTAGCCGGCTGAGGTTTGTGGCCGAGACTCCTGCATGCGTTTTGGATTTGTGAAACAGCTGTGGTAAAGAGTTGGGAGAGATCATGACAGCCAAATAGTGAAAGGGCAGAAACGGGCCAGAGAGGTAGATTCCATTCAGAAGATTGGAATGGATTTTGGTGCATCGGGCATGGctacagcacaaacacacagaggaaaTCAGTGATGCTTTTCGTGGACCAGACTCCATCCACAGGGGGAAAAGAAAACGTTCAACTTCCTGGCTAGAAAACTGAACTGACAAGCAGCTACCAACCGACATGCCCACAAACAGGGGATTCCGAGAGTTCCGTAGATTAATTGTTACTCTTGGAAAGGTTTTTTCGGAAAATCAGCAAAGCACCTAAAGCATACTGAAGCCTTTTCTCACATTCAGGGTGATGAGTTTAACACTTCCAGCTTGTTTGGaacaaacacaagaattaagtaGAAAGACAAAGTAAACAGATCTACCTACACATGATCAGCTTTGCAAAGCGAAGACACTGAGCCTTACAACAGCGCCTTCTTAGGTCTTACATCTTACTTGGACTTGGATTTACCGCCTTGTCTGCCTCAAAGTTCAGTAAGTTTCAACTCTGACCTCATTTGTCAGTGGCCTATCAATGTGCACAAAATGAGTTTACAGCTGTCTGTCACCTAAGATAACGGGACCAGTGATGGACGATGCCCCGAATCTTTGTTCATAGTGGGGTTCTTACTCATCTTATTCTCCAATGGACAATTATTTCCAGTGCATTGTTTTGTGGAAATACAGTCTTTGCTTGGCTTGTTGTTTAAATTTCCCGGCACTCATTGCTGACGTAAACCCCTGTGCTCCGCCTCCACGGAGGGCCTGACAGCAAATCCAAGGAAAGAGTCATCCCAGTACCCACTCGCACTACGTGACTGAGGGGTGATTTCTGGgaagaacaaaaaataaatgccaCAGCAATGAGCCGCTGAGCAACAAAGATGTAGGTAGAGTTTCAAGTCAACCTGCTTCACCGCTACCACCTCCAGTTATTGACTCCATacatccacacaaagcacactCTCTGATCTCAACCAAATGTCATGACATTTTGAACGCTCCATCTCTCTGTTACTGCTTCAAAGTGCAGCCAAGCACAGGCAGAGTGAATGGAAATGGATTCCATactcacacacagatgcatttgatttaataaaagagctGGGCCTGTATTTCTTAATTTATTCTGAATCTCTCAGAGGAATTACGCTGTAGGAAgtttgatttcatgtttttattaggTTGCATGGAGGGTAATCTTTATTATCATACAATATTAACTTGAAACCTTCCTTTCCATTTGTTTTAAGAGGTGAGGTAATGAAAGGAGAAGAGAAGGCAGATAAAACTTGCCTGGAGCTGATAAAAACAGGACCactctgccacacacacacacacacacagacacacacactctttttaGGAACAGGTGCTTTCCATCCTGTGAGATGGTCTTGGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641447.1 True 1709 lncRNA 0.44 3 2908630 2910625

Neighbor

gene id symbol gene type direction distance location
si:dkey-219e21.4 NA coding downstream 89971 2812555 ~ 2818659 (-)
pde5ab pde5a coding downstream 111099 2678945 ~ 2797531 (-)
LOC120572242 NA coding downstream 886263 2019612 ~ 2022367 (-)
LOC120573473 NA coding downstream 1022943 1883902 ~ 1885687 (-)
aco1 aco1 coding downstream 1133712 1749519 ~ 1774918 (-)
c14h4orf54 NA coding upstream 206609 3117234 ~ 3128616 (-)
focad focad coding upstream 256243 3166868 ~ 3252975 (-)
LOC120573709 H2AFZ,LOC100694115,LOC102297571,LOC102200939,LOC101065890 coding upstream 544895 3455520 ~ 3457848 (-)
adam19a LOC108242304,LOC103148901 coding upstream 893361 3803986 ~ 4118384 (-)
ing2 ing2 coding upstream 1346010 4256635 ~ 4259813 (-)
G140762 NA non-coding downstream 84012 2824313 ~ 2824618 (-)
G140761 NA non-coding downstream 84399 2822870 ~ 2824231 (-)
G140753 NA non-coding downstream 179011 2729281 ~ 2729619 (-)
G140750 NA non-coding downstream 217585 2690317 ~ 2691045 (-)
G140749 NA non-coding downstream 218383 2688754 ~ 2690247 (-)
G140842 NA non-coding upstream 242274 3152899 ~ 3153336 (-)
G140855 NA non-coding upstream 369788 3280413 ~ 3433666 (-)
LOC120573362 NA non-coding upstream 408400 3319025 ~ 3321057 (-)
G140874 NA non-coding upstream 524435 3435060 ~ 3435360 (-)
G140875 NA non-coding upstream 525293 3435918 ~ 3436192 (-)
arsj arsj other downstream 286530 2597834 ~ 2622100 (-)
camk2d1 LOC100695450,LOC101472930 other downstream 335147 2454066 ~ 2573483 (-)
G140615 NA other downstream 850439 2051481 ~ 2058191 (-)
LOC120573528 NA other downstream 876124 1927132 ~ 2032506 (-)
tspan5a LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072 other downstream 1259198 1623259 ~ 1649432 (-)
LOC120573530 NA other upstream 228496 3139121 ~ 3143189 (-)
G141003 NA other upstream 1244299 4154924 ~ 4155547 (-)
G141027 NA other upstream 1364026 4274651 ~ 4275274 (-)
LOC120573533 NA other upstream 1411139 4321764 ~ 4332019 (-)
G141145 NA other upstream 1730870 4641495 ~ 4664198 (-)

Expression


Co-expression Network