trnas-uga_22


Basic Information

Item Value
gene id trnas-uga_22
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 6028841 ~ 6028922 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_683
GCTGCgatggccgagtggttaaggcgttGGACTTGAAATCCAATGGGATCTTCCCGCGCAGGTTCGAACCCTGCTCGCAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_683 True 82 tRNA 0.60 1 6028841 6028922

Neighbor

gene id symbol gene type direction distance location
serpine1 serpine1 coding downstream 23623 5998118 ~ 6005218 (-)
vgf NA coding downstream 61413 5959440 ~ 5967428 (-)
trnal-aag_6 NA coding downstream 71709 5957051 ~ 5957132 (-)
snapc2 NA coding downstream 73781 5946032 ~ 5955060 (-)
LOC120573619 NA coding downstream 106970 5901924 ~ 5921871 (-)
trappc14 LOC104941436 coding upstream 129936 6158858 ~ 6185624 (-)
tm4sf21b NA coding upstream 208651 6237573 ~ 6243669 (-)
eif4a1a LOC107098142,LOC103365478,LOC100693841,LOC103148870,LOC102238331,LOC101477102 coding upstream 302766 6331688 ~ 6340737 (-)
LOC120573734 NA coding upstream 306572 6335494 ~ 6335632 (-)
LOC120573735 NA coding upstream 307699 6336621 ~ 6336759 (-)
G141470 NA non-coding downstream 36614 5989895 ~ 5992227 (-)
G141468 NA non-coding downstream 57454 5970935 ~ 5971387 (-)
G141467 NA non-coding downstream 58228 5969951 ~ 5970613 (-)
G141416 NA non-coding downstream 317125 5711434 ~ 5711716 (-)
G141394 NA non-coding downstream 444315 5584162 ~ 5584526 (-)
G141601 NA non-coding upstream 127130 6156052 ~ 6157413 (-)
G141612 NA non-coding upstream 236518 6265440 ~ 6266025 (-)
G141613 NA non-coding upstream 237229 6266151 ~ 6266583 (-)
G141667 NA non-coding upstream 427017 6455939 ~ 6511995 (-)
G141683 NA non-coding upstream 529376 6558298 ~ 6645212 (-)
G141439 NA other downstream 185695 5743559 ~ 5843146 (-)
G141400 NA other downstream 428379 5596958 ~ 5600462 (-)
cd99l2 cd99l2 other downstream 445846 5560026 ~ 5582995 (-)
nat16 nat16 other downstream 553686 5424561 ~ 5475155 (-)
G141234 NA other downstream 928759 5099705 ~ 5100082 (-)
gal3st4 gal3st4,LOC104939968 other upstream 148999 6177921 ~ 6220260 (-)
LOC120572220 NA other upstream 193049 6221971 ~ 6231297 (-)
sox19b LOC104926817,LOC103365479,LOC100693580,LOC102199731,LOC101477749,LOC104962535 other upstream 279976 6308898 ~ 6315817 (-)
LOC120572256 NA other upstream 324542 6353464 ~ 6371100 (-)
tbc1d14 tbc1d14 other upstream 347050 6375972 ~ 6416457 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) trnas-uga-84 NA coding NC_048585.1 CM023239.2 39404356 ~ 39404437 (-)