G153415


Basic Information

Item Value
gene id G153415
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9872321 ~ 9878863 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU207833
gtgtgaagtgtgaacagtTGACCCAGCCAGCCTCTGTGACTGTGCAGCCAGGTCAACGTCTGACCATCACCTGTCAGGTCTCTTATTCTCTCAGCAGctactacacagcttggatcagacagcctgcagggaaaggactggagtggattggAATGGCAGCAGTTGGATCCACTACATGCTTAAAAGATTCACTTaagaacaagttcagtatcAGCTTGGACTCTTCCAGCAAGACAGTGACTCTAAATGGACAGAATGTGCAGCCTGAAGACactgctgtgtattactgtgccagatacacacagtaacacaaaccatcagtagacctgaacaaaaacccctcagagcctgaacacttgtaacatgaagccaccagaggaggagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207833 True 386 lncRNA 0.48 2 9872321 9878863

Neighbor

gene id symbol gene type direction distance location
LOC120574335 NA coding upstream 750192 9121513 ~ 9122129 (+)
LOC120574334 NA coding upstream 754105 9117670 ~ 9118216 (+)
LOC120574332 NA coding upstream 755709 9115133 ~ 9116612 (+)
LOC120574331 NA coding upstream 762768 9109105 ~ 9109553 (+)
LOC120574621 NA coding upstream 763848 9107950 ~ 9108473 (+)
LOC120574409 NA coding downstream 439 9879302 ~ 9887967 (+)
LOC120574608 NA coding downstream 14283 9893146 ~ 9893584 (+)
LOC120574613 NA coding downstream 16426 9895289 ~ 9895849 (+)
LOC120574415 NA coding downstream 60100 9938963 ~ 9939633 (+)
LOC120574577 NA coding downstream 61660 9940523 ~ 10027725 (+)
LOC120574665 NA non-coding upstream 7431 9862985 ~ 9864890 (+)
G153340 LOC108239224 non-coding upstream 157259 9658348 ~ 9715062 (+)
G153359 NA non-coding upstream 194244 9654323 ~ 9678077 (+)
G153341 LOC103145434 non-coding upstream 234352 9636829 ~ 9637969 (+)
G153345 NA non-coding upstream 329387 9542179 ~ 9542934 (+)
G153423 NA non-coding downstream 42689 9921552 ~ 9935038 (+)
G153424 NA non-coding downstream 47275 9926138 ~ 9926485 (+)
LOC120574664 NA non-coding downstream 68708 9947571 ~ 9953355 (+)
LOC120574581 NA non-coding downstream 94341 9973204 ~ 9974573 (+)
G153640 NA non-coding downstream 291079 10169942 ~ 10235939 (+)
LOC120574644 NA other upstream 12822 9858797 ~ 9859499 (+)
LOC120574590 NA other upstream 21442 9850265 ~ 9850879 (+)
LOC120574406 NA other upstream 29362 9841276 ~ 9842959 (+)
LOC120574632 LOC108239224 other upstream 31693 9800732 ~ 9840628 (+)
LOC120574405 NA other upstream 33666 9838206 ~ 9838655 (+)
LOC120574588 NA other downstream 27131 9905994 ~ 9911266 (+)
LOC120574412 NA other downstream 29717 9908580 ~ 9920151 (+)
G153398 NA other downstream 40672 9919535 ~ 9920004 (+)
LOC120574623 NA other downstream 41468 9920331 ~ 9920812 (+)
LOC120574413 NA other downstream 52289 9931152 ~ 9934195 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) LOC103027076 NA misc NW_019172441.1 APWO02002039.1 82398 ~ 82963 (+)