LOC120574408


Basic Information

Item Value
gene id LOC120574408
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9876821 ~ 9877451 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU207835
gatatcttcacctctacttatctgagtgcagagaggaggacagagaacagtggacacacagtttaacatgatggactataggacaggactgctgcttttaactctctgctgggcaggtgttgatggtcagactctgacagaatctgaGCCATCAgttaaaagacctggagaatcccacagattgacctgtacaacatctggattGTCATTCAGTAGCAGCTGGATGGCCtggatcagacaggctcctggaaaaggactggagtgggttGCTACTATCAGTTATACCAGTGGCAGCATCTACTACTCTCAGTCAGTTCAAGGCCGGTTTACCAtctccagagacaacagcagagagcagctgtatctgcagatgaacagtctgaagactgaagattctgctgtttattattgtgctcgatac
>unassigned_transcript_836
atgatggactataggacaggactgctgcttttaactctctgctgggcaggtgttgatggtcagactctgacagaatctgaGCCATCAgttaaaagacctggagaatcccacagattgacctgtacaacatctggattGTCATTCAGTAGCAGCTGGATGGCCtggatcagacaggctcctggaaaaggactggagtgggttGCTACTATCAGTTATACCAGTGGCAGCATCTACTACTCTCAGTCAGTTCAAGGCCGGTTTACCAtctccagagacaacagcagagagcagctgtatctgcagatgaacagtctgaagactgaagattctgctgtttattattgtgctcgtTGTTAA

Function

GO: NA

KEGG:

id description
ko04145 Phagosome
ko05140 Leishmaniasis
ko05310 Asthma
ko05340 Primary immunodeficiency

RNA

RNA id representative length rna type GC content exon number start site end site
TU207835 True 421 TUCP 0.47 2 9876821 9877328
unassigned_transcript_836 False 357 V_gene_segment 0.47 3 9876888 9877451

Neighbor

gene id symbol gene type direction distance location
LOC120574335 NA coding upstream 754692 9121513 ~ 9122129 (+)
LOC120574334 NA coding upstream 758605 9117670 ~ 9118216 (+)
LOC120574332 NA coding upstream 760209 9115133 ~ 9116612 (+)
LOC120574331 NA coding upstream 767268 9109105 ~ 9109553 (+)
LOC120574621 NA coding upstream 768348 9107950 ~ 9108473 (+)
LOC120574409 NA coding downstream 1851 9879302 ~ 9887967 (+)
LOC120574608 NA coding downstream 15695 9893146 ~ 9893584 (+)
LOC120574613 NA coding downstream 17838 9895289 ~ 9895849 (+)
LOC120574415 NA coding downstream 61512 9938963 ~ 9939633 (+)
LOC120574577 NA coding downstream 63072 9940523 ~ 10027725 (+)
LOC120574665 NA non-coding upstream 11931 9862985 ~ 9864890 (+)
G153340 LOC108239224 non-coding upstream 161759 9658348 ~ 9715062 (+)
G153359 NA non-coding upstream 198744 9654323 ~ 9678077 (+)
G153341 LOC103145434 non-coding upstream 238852 9636829 ~ 9637969 (+)
G153345 NA non-coding upstream 333887 9542179 ~ 9542934 (+)
G153423 NA non-coding downstream 44101 9921552 ~ 9935038 (+)
G153424 NA non-coding downstream 48687 9926138 ~ 9926485 (+)
LOC120574664 NA non-coding downstream 70120 9947571 ~ 9953355 (+)
LOC120574581 NA non-coding downstream 95753 9973204 ~ 9974573 (+)
G153640 NA non-coding downstream 292491 10169942 ~ 10235939 (+)
LOC120574407 LOC102776372 other upstream 4159 9860055 ~ 9872662 (+)
LOC120574644 NA other upstream 17322 9858797 ~ 9859499 (+)
LOC120574590 NA other upstream 25942 9850265 ~ 9850879 (+)
LOC120574406 NA other upstream 33862 9841276 ~ 9842959 (+)
LOC120574632 LOC108239224 other upstream 36193 9800732 ~ 9840628 (+)
LOC120574612 NA other downstream 881 9878332 ~ 9878785 (+)
LOC120574588 NA other downstream 28543 9905994 ~ 9911266 (+)
LOC120574412 NA other downstream 31129 9908580 ~ 9920151 (+)
G153398 NA other downstream 42084 9919535 ~ 9920004 (+)
LOC120574623 NA other downstream 42880 9920331 ~ 9920812 (+)

Expression


Co-expression Network