G153746


Basic Information

Item Value
gene id G153746
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 10609591 ~ 10638479 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU208291
taaaaaaaggcaccACCTTTGGCCCtaccattttaaaaaaacagtgacaaacCTGTTTGATATTTCTTACACCAATGCAAAAGTGCACTtgacaatttgttttatttttttccccaccagaTTCAATGACCAATTAAGGATGGAGACAAACTGaacaaatgtgacaaaaatatcCTAACAAAACTCAATGGGGAAATATACACATCGGTGACAATTTTAGCAGTTGGAATAAGTATATCAAGCAGGCGGTCTGTGCATtatcagcatttttttttaaaattgtcaCTCTGACATTTCTATAAAATTACCTTTTCCCCAAACATATTTGAAAGTTAgcaaatggaagaaaaaaaatgaaagaaaaaaaaaaaaaaaacacattcaagcTTTCAAGTTCATGTTCTGGAGAAGTAcagaattgtttttttctgacagGCAACAGCATTCAGAAATGGATGTGGGTAGAGAAAGGAGTACCTGGGGTGAGTACCTGCACAGTTTGACAGTCAGAGAGTATCCATGATTTTTAATTTGCCCTTTTCTCATGTGGTCTCGCTCACAACACCAACGCTGTGTGAGGTATGGAAGTCAGCTGCAATTCATTTGATAAACCCTACCCTCCAGTTAGTTAGTTACGTAAGGCCCCCGGTGCTATAAAcaccccccaaacacacactgcaTGGCATTATCAGGCACAGTAAGCTGGACAACAAATCCATGGCATTTGAGTTATGGTTATGGAAAAATAAATGGCTTGTTTTTCCACATACACCTTTGaaagtatgtctgtgtgtttacataTGAGCAGGAGATAATGTAGACACACAGTGGCTGAATATCTCAGCAAATAAAAATTTACTACATTTTCCTACTTAAGTAaataaccaaaaaaataaaaataaataaatacaggcaGGAAAGTTTTATTGGactagttcatattttttttctgccattttgTCCACAAAGACAAATATACATCTACAAAAGGAGCAAAAACCGATATAAAACGAGGGGTACCTCCGGGCATGTTTGCTCAGGGCTACACTGGCCTTTCCCTCTTGGCTTTGTGTgaatgttttctattttcttcTCATTCATCAGGCCTAGTCCTTCATCTTCAGTGCATACTTATGATGCACTACTCGAAAACAGGATAAAGATATATGCACATAGCACATAACACAAAATCATAGGCATTGAACTGAACGTAAACAGGGTAGGAGAGGTAGGGTGAGAGGGTGGGCAGGGGAGATGGGAGAGGTGGGGGGTATGGGAGGggggagggggtggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208291 True 1294 lncRNA 0.39 2 10609591 10638479

Neighbor

gene id symbol gene type direction distance location
cacna1ia cacna1i,LOC103368285,LOC102798922,LOC102291313 coding upstream 34414 10418018 ~ 10575177 (+)
lgals2a LOC104924438,LOC103145452,LOC102225901 coding upstream 211243 10394107 ~ 10398348 (+)
sgsm3 sgsm3,LOC103367432,LOC102800281 coding upstream 257092 10337243 ~ 10352499 (+)
LOC120573826 LOC102775825,LOC101478983,LOC102198530 coding upstream 323050 10209890 ~ 10286541 (+)
LOC120575114 LOC102196266 coding upstream 418427 10183235 ~ 10191164 (+)
LOC120574456 NA coding downstream 188024 10826503 ~ 10828557 (+)
LOC120574457 LOC104952666 coding downstream 190854 10829333 ~ 10832063 (+)
LOC120575243 NA coding downstream 207265 10845744 ~ 10854576 (+)
LOC120574313 LOC100699590,LOC103363457 coding downstream 228923 10867402 ~ 10907572 (+)
LOC120575143 LOC104934333,LOC107376608 coding downstream 303329 10941808 ~ 10942732 (+)
G153740 NA non-coding upstream 6627 10602417 ~ 10602964 (+)
G153684 NA non-coding upstream 210238 10399125 ~ 10399353 (+)
G153640 NA non-coding upstream 373652 10169942 ~ 10235939 (+)
LOC120574581 NA non-coding upstream 635018 9973204 ~ 9974573 (+)
LOC120574664 NA non-coding upstream 656236 9947571 ~ 9953355 (+)
G153799 NA non-coding downstream 70889 10709368 ~ 10709629 (+)
G153817 NA non-coding downstream 148383 10786862 ~ 10818172 (+)
G153875 NA non-coding downstream 293240 10931719 ~ 10932529 (+)
G153892 NA non-coding downstream 329151 10967630 ~ 10969844 (+)
G153872 NA non-coding downstream 334856 10973335 ~ 11009050 (+)
G153646 NA other upstream 267968 10250377 ~ 10341623 (+)
G153433 NA other upstream 542849 10065460 ~ 10066742 (+)
LOC120574658 NA other upstream 670987 9938019 ~ 9938604 (+)
LOC120574414 NA other upstream 673310 9935671 ~ 9936281 (+)
LOC120574413 NA other upstream 675396 9931152 ~ 9934195 (+)
G153808 spag9 other downstream 113681 10752160 ~ 10752898 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other downstream 425380 11063859 ~ 11073826 (+)
LOC120574068 NA other downstream 568562 11207041 ~ 11225249 (+)
G154254 NA other downstream 1447382 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other downstream 1450894 12089373 ~ 12093558 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025848 NA non-coding NC_007114.7 CM002887.2 58806215 ~ 58811833 (+)
bowfin (Amia calva) G42136 NA non-coding CM030125.1 CM030125.1 20401708 ~ 20405085 (-)