G153808 (spag9)


Basic Information

Item Value
gene id G153808
gene name spag9
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 10752160 ~ 10752898 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU208368
GTCTTAATCATAATTACTGATctaatggggggaaaaaatcctCCTACTTGATTCATATTCAGACCTTCATTTCCTACCTTGTATTTACTGGGCAGGCTCCAGCCGTGTGCCGTGACTCGTCCATCCTCCTTCTGCATGTGGGCCTTGACCTGTCTGTACTGGgctctcttctgctctttaCGCGATGGCGAGCTGCACTGGTCCTTTTCTTCATTGAGGAAGTCGAAAGTCTTGGACTTCTCTGTTGGGAACTGAGAGAAGGTGCTACTCCTCTTCACCATGCTGCTAGAGGCGTTGTACTTCATGTTGGACTGGGACTCCACCTTCTTCATAGCCGGCGAACTGGAGGAGGAGCTAAACAGTCTGCTGAAGCTGCAGGTGACGAGGTTACAGAAAGCAAAGAGGGGAACAGAGCCGACAGGAGGGCAGGGGAAAAAGCaaggaaggggagggggggtcaccaaccaaccaaccaaccaaccagacAACCAAGCAGCTACCACCAACATTTACATTATGCAGTAAAGCATGCTGGGAGCCGtggaacagctgagcatttc

Function

symbol description
spag9 Predicted to enable kinesin binding activity; protein kinase binding activity; and signaling adaptor activity. Involved in lysosome localization and positive regulation of cell migration. Acts upstream of or within retrograde transport, endosome to Golgi. Located in centriolar satellite; cytosol; and lysosomal membrane. Implicated in hepatocellular carcinoma and liver cirrhosis. Biomarker of endometrial cancer.

NR:

description
PREDICTED: C-Jun-amino-terminal kinase-interacting protein 4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208368 True 560 TUCP 0.51 2 10752160 10752898

Neighbor

gene id symbol gene type direction distance location
wfikkn2a wfikkn2,LOC102797846 coding upstream 119525 10628446 ~ 10632635 (+)
ankrd40 ankrd40 coding upstream 127620 10618653 ~ 10624540 (+)
cacna1ia cacna1i,LOC103368285,LOC102798922,LOC102291313 coding upstream 176983 10418018 ~ 10575177 (+)
lgals2a LOC104924438,LOC103145452,LOC102225901 coding upstream 353812 10394107 ~ 10398348 (+)
sgsm3 sgsm3,LOC103367432,LOC102800281 coding upstream 399661 10337243 ~ 10352499 (+)
LOC120574456 NA coding downstream 73605 10826503 ~ 10828557 (+)
LOC120574457 LOC104952666 coding downstream 76435 10829333 ~ 10832063 (+)
LOC120575243 NA coding downstream 92846 10845744 ~ 10854576 (+)
LOC120574313 LOC100699590,LOC103363457 coding downstream 114504 10867402 ~ 10907572 (+)
LOC120575143 LOC104934333,LOC107376608 coding downstream 188910 10941808 ~ 10942732 (+)
G153799 NA non-coding upstream 42531 10709368 ~ 10709629 (+)
G153746 NA non-coding upstream 113681 10609591 ~ 10638479 (+)
G153740 NA non-coding upstream 149196 10602417 ~ 10602964 (+)
G153684 NA non-coding upstream 352807 10399125 ~ 10399353 (+)
G153640 NA non-coding upstream 516221 10169942 ~ 10235939 (+)
G153817 NA non-coding downstream 33964 10786862 ~ 10818172 (+)
G153875 NA non-coding downstream 178821 10931719 ~ 10932529 (+)
G153892 NA non-coding downstream 214732 10967630 ~ 10969844 (+)
G153872 NA non-coding downstream 220437 10973335 ~ 11009050 (+)
G153915 NA non-coding downstream 325557 11078455 ~ 11079680 (+)
G153646 NA other upstream 410537 10250377 ~ 10341623 (+)
G153433 NA other upstream 685418 10065460 ~ 10066742 (+)
LOC120574658 NA other upstream 813556 9938019 ~ 9938604 (+)
LOC120574414 NA other upstream 815879 9935671 ~ 9936281 (+)
LOC120574413 NA other upstream 817965 9931152 ~ 9934195 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other downstream 310961 11063859 ~ 11073826 (+)
LOC120574068 NA other downstream 454143 11207041 ~ 11225249 (+)
G154254 NA other downstream 1332963 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other downstream 1336475 12089373 ~ 12093558 (+)
G154461 NA other downstream 2090525 12843423 ~ 12846597 (+)

Expression


Co-expression Network