G153916


Basic Information

Item Value
gene id G153916
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 11079752 ~ 11080658 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU208555
CGGTCATCAGCTTTAGCGAGAAGGCAGCTGTTGAATACTTTGCAGGAGTGAAGCTCAGGGGAGGTTGCTGAAAGTTACCGCTCACAATGTGTGTCCTTTATAGTGACAGGAAACAGGGACAGCATGATTAATTCTTGTAATGCCAGGGTAACTGCCAGCTGGTGAGATTATCAGCTTGTTTGTGTAGATCACAGAGTCCTTAGATATCTTGAGATCaatataaaagaataaaatcagGGAACTTCCTAAAAACAGCCACAGATATACCTATCATCATttatcaaacaacaacaactgaacGTACAGCTAATTTGGAGCCACAGTCTTGCAATGGAGCTTCAATGATATATTCAGAGTcactagcagcagcagctcggCACTGACTGCTCCGTGAATGCTCGGCTCCTCCCAAAAAAAGCTCTCCAGGAGACACAAGGCGTCCATTTTTATACAGGTCAGCCTTCACCACAATGACCATGGACGCTTCTTTGCATCGTACATGGACAGCCGATGCGCGATTGAATTCTGGTCCACTGACGTTTTCTGCATCAGTTCTTAATGTGGCAGATTTATATTCCCTTCCTTCAGCATCAATCATGGGTCCATCTTTTAAAGTTCGAATGGCATCTGCAACACCAAAAGCAAACAATATCAACAGTGCCAGAGAGGCGCAGTGACCTGCATTCACCATTGTGCTCTTTTCTCAGAACAACACAGCAAAGCCTCCTGCTCAACACAATCTGCAAGACAAGTACAAGTGTTATGAATGAGATGCAGAAGGTTCAAACACTCAAATACTTCCCAGTTCAGACCAATCAAATCACATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208555 True 828 lncRNA 0.44 2 11079752 11080658

Neighbor

gene id symbol gene type direction distance location
LOC120574484 NA coding upstream 21529 11055103 ~ 11058223 (+)
rhot1a rhot1,LOC102207791,LOC103392922,LOC100690483,LOC102790665,LOC101469002,LOC105933022 coding upstream 24686 11037680 ~ 11055066 (+)
adap2 LOC104934589,LOC103360692 coding upstream 43120 11030860 ~ 11036632 (+)
atad5a NA coding upstream 49008 11017291 ~ 11030744 (+)
rfx1a LOC101471697,LOC103360694 coding upstream 76072 10992191 ~ 11003680 (+)
LOC120574489 NA coding downstream 7548 11088206 ~ 11092146 (+)
LOC120574067 NA coding downstream 122120 11202778 ~ 11209838 (+)
nup85 nup85 coding downstream 238591 11319249 ~ 11328213 (+)
mrps7 mrps7,LOC102783021 coding downstream 257393 11338051 ~ 11341483 (+)
slc25a19 slc25a19 coding downstream 267558 11348216 ~ 11351460 (+)
G153915 NA non-coding upstream 72 11078455 ~ 11079680 (+)
G153872 NA non-coding upstream 70702 10973335 ~ 11009050 (+)
G153892 NA non-coding upstream 109908 10967630 ~ 10969844 (+)
G153875 NA non-coding upstream 147223 10931719 ~ 10932529 (+)
G153817 NA non-coding upstream 261580 10786862 ~ 10818172 (+)
G153917 NA non-coding downstream 991 11081649 ~ 11082707 (+)
G154038 sumo2 non-coding downstream 229767 11310425 ~ 11318493 (+)
G154051 NA non-coding downstream 271552 11352210 ~ 11352460 (+)
G154109 NA non-coding downstream 409248 11489906 ~ 11493649 (+)
G154124 LOC108239293,LOC104946078,LOC104918844,LOC101480216,LOC102194634,LOC100693182 non-coding downstream 418191 11498849 ~ 11501165 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 5926 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 326854 10752160 ~ 10752898 (+)
G153646 NA other upstream 738129 10250377 ~ 10341623 (+)
G153433 NA other upstream 1013010 10065460 ~ 10066742 (+)
LOC120574658 NA other upstream 1141148 9938019 ~ 9938604 (+)
LOC120574068 NA other downstream 126383 11207041 ~ 11225249 (+)
G154254 NA other downstream 1005203 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other downstream 1008715 12089373 ~ 12093558 (+)
G154461 NA other downstream 1762765 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 1936301 13016959 ~ 13026416 (+)

Expression


Co-expression Network