G154307


Basic Information

Item Value
gene id G154307
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12216876 ~ 12218005 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209073
attttcgaaaacaaatttacattttagaaaacaaatttacattttggaaaacaaaataacattttagaaaacaaatttacattttcgaaaacaaattaacaagatgcaaaacacttttaccagtcccgaaacaaatttacaaatgacagattcttcacggaaagggaatgtaccacataccggaagtgatgaggttttgtatacatgtcgccttgactacggcagttatggatcgaatgcgtcaatagagccgccatcttggaacaggggaggcactgccttatatactgtctatgggccgtccttaatgcatcagcgtcaatgtaggcaaaggtctaacggaaataaaatcactataaatcgtcaaaatctcatgcgatgttctagtttttttaaacaaaaagacaaagagactaattaatgtgttaatacaaagaatatttattataatcagttcacagatatgagtacaaacggaaacttcacccttctgaactaagaggttctgcttcaaagtgaagtttaaacagactgaaatgtccaggctcactcccccactaatgattcatttatttctgcatgtatttatttatttaacgagactttaagtcgtgtttcgtcgtccacagtccgagtcccgccagactccctttaggaaacctgtgatttaaacttcagcaggctgtgacagtccgctccgtttagtcctggatctgattctcccgggcttcccttccctccagcgggcccagcaatacggcctgggtctccagctgcgtggtgtcggttttggctcccaggaatggacagtgagctccaggtcctgcagctgcagacggactcgcagcggccccctgctgtagcttcgatccggccgcggctgtcgatacgttccctgtttttccaatgtttccgtcaggtccgcgtcatataaaaactccaaacaccgaccacacgtaaagtcaccataaacttcattcacgccatatactcactcacaacaacacaaattgactgcgctcaccaacaacacctcatcacttccggtatgtggtacattccctttccgtgaagaatctgtcatttgtaaatttgtttcgggactggtaaaagtgttttgcatcttgtta

Function

NR:

description
PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209073 True 1130 lncRNA 0.43 1 12216876 12218005

Neighbor

gene id symbol gene type direction distance location
slc5a11 slc5a11,LOC102796461 coding upstream 31088 12178289 ~ 12185788 (+)
grid2ipa LOC103361735,LOC102310441,LOC102202691,LOC102796762 coding upstream 39118 12151296 ~ 12177758 (+)
e4f1 e4f1 coding upstream 65880 12143460 ~ 12150996 (+)
LOC120575115 haghl,LOC100699516,LOC104918824,LOC101076411 coding upstream 79621 12133972 ~ 12137255 (+)
LOC120575138 hagh,LOC100699784,LOC107092812 coding upstream 83421 12128791 ~ 12133455 (+)
si:ch73-374l24.1 LOC101487097,LOC103361464,LOC102304961,LOC106957043,LOC103141622 coding downstream 348355 12566360 ~ 12684418 (+)
cacng5b LOC104918808,LOC100698262,LOC103361465,LOC103141620 coding downstream 467583 12685588 ~ 12693357 (+)
LOC120574005 LOC101485652,LOC100697553,LOC108239271,LOC107376513,LOC106518736 coding downstream 520243 12738248 ~ 12745057 (+)
dxo dxo coding downstream 531206 12749211 ~ 12753360 (+)
anks4b anks4b coding downstream 543616 12761621 ~ 12765662 (+)
G154297 NA non-coding upstream 26834 12187623 ~ 12190042 (+)
G154227 NA non-coding upstream 148124 12067737 ~ 12068752 (+)
G154226 NA non-coding upstream 151368 12065280 ~ 12065508 (+)
G154225 LOC105933046,LOC101076874,LOC102218385,LOC106948144,LOC103469244,LOC103141651 non-coding upstream 152604 12063970 ~ 12064272 (+)
G154215 NA non-coding upstream 196368 12020278 ~ 12020508 (+)
LOC120574756 NA non-coding downstream 123395 12341400 ~ 12342350 (+)
G154367 NA non-coding downstream 183725 12401730 ~ 12401983 (+)
G154379 NA non-coding downstream 257762 12475767 ~ 12523672 (+)
G154385 NA non-coding downstream 348969 12566974 ~ 12568852 (+)
G154410 NA non-coding downstream 516678 12734683 ~ 12734912 (+)
G154254 NA other upstream 101684 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 123318 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 991627 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 1143050 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 1463978 10752160 ~ 10752898 (+)
G154461 NA other downstream 625418 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 798954 13016959 ~ 13026416 (+)
vasnb vasn other downstream 1438010 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 1551014 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 1551698 13769703 ~ 13769776 (+)

Expression


Co-expression Network