G154535


Basic Information

Item Value
gene id G154535
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13028132 ~ 13034382 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209410
TAACCTTCTAAAAAATACTTGGGTACTGTAATGTTAATTTGTATCAGGAAACTAAGGTAAGTACTTTCAGGACTTTTAAGTAAGAAGAACACGGTTGGAAAAATATTTTCCCCGATACATGAAACATATTACATGTGAAACTTTGTAATATgtgaactttatttatttagagtCAGTGTACTTTAAAACATAACAATTGTTCAGTAAATGACAAGAAGCCAGATAAGCTGTTTACTATCATAGAGCTCATTATTTTTCATATATGAATggagacacaaatacacaaacttgTATTTGCAGTAAGTAACGTTTATGTCCTTGaacataaaagaaaaaggatcaAGATCATTCTTTAAAAAGTCAATGCCAAATCCAGTCTAGAGTATGTACTGTAATTGcatttaaaggggctgtactcaatATTCAGAGGCGAGAATCATCACACCATCTACATGTTTGCTTGAGGCtcacctttcctgtcttcttCATAGAAATGTTCAAACTTTCAAGCAGCGACGGCTTCCTGTCAGCTACATGCTAAACCACAATTTCCCGTTTCCTGTTCACTGATTTGGCTTCATGGCAATCATTTTAACACAATGTTTAGAACCATGGTAAGCTTTTTAGTATATGACCCAgtagggtcgaaacgttgcattttatattaaatatgggagtttaaagcagtgttgcggacattacattCTTTTCGTTTTAAGtactttcatttgtcctgcacctgccagaaggtgggatgtgcacacaattacttttataaAGCTTTTTAGTATGCCATGCATATATCCACACATTAAGAATATAAAagctaaagaaataaaaaaggaaagaaatatataatacatcATCCTAACAATCAGAGATTAAGTCCAAATCACACTTTACGAATGCATTCTGCCAAAGTAATCATGTATTAATAAATGCAAAAGGCCTACAAAATATATGAGAAAAAACTgttaagttataaaaaaaatgtcactggGACATCACAGTGGAATGATGGCTAAGGCTTGTACAATGAAACTCACAACGTCCCTGGTTCGAATCCAACTGGGGAGCCTTGGCTGCATGTCATCATGGATTTGGCTCTTCAATATGAGTATTTGATTATTCATTCTGTGGCGTAAGCCtgttttatttgacagtttACATGTGCACGGCTTGTTAGGTGGCTTTACAGCATGTAAATAAAGGCAACAGAAATATGCACAGACCATCATCTTCTCTCTAAACTGACTTGGTGTTAGTATGAACACATCACATGCACAACATTTATTGCCGAAActagatatcaaacaaaagccaggtTGGAGACGCAAACCACGGTAACCCCTGCCAACCTCCGCTCTAGCGGCATCGCCAAATAATGCTTAAATTACTTAAAAAGGTAATCAACTATTCCAGCAGTcacatgtgacaaaaaaaattatatgtagaaatgtaaattgAAGCGGTTTTGACATTACAGAGCTGCCTTGGTTGCTGTCCGTGTGTCTGTTATGAAGGTTATGTTTTtactgcattgcattgtgggatacctATGCCAgtgtagtgtgtgcacaactATCAGCACAACCACTAATGTAAAAATCTGAGGTCATTTTTACTAAGCTTCAAATGAAGTTTAAccttttgtttttaagttttaatggGATTTGAAAGTTGAATACTACCCGGAATGTATGAAAGATGTGGAAAATTTTAAGGTTTAAATGGAGTTTCCAGCTGAAAATATGAATAACATGGAATATTTCTGAAAATATCAAAGGAACGAATGATAAAAGTACTACCCTGGCATGTCCAAATTCGCTGACTGTTTTGATGTTTGAATGAAGTAGAAATAATTAATTTAGACCGGCACAGCGTCAGCGTGGGAATAATGGTTCCAGTATTTACACCAAACAACACTCAAAAAGAACAGAGATAACTTGATTAAAATGGTTGAGACTAAATCCAGAGGCCTGACGTCAGTAATCAAGTGTGTCTGAAGGACCTTCAGTGGGTAATCTGGCCTCGGCTGTTTCTCTCCAAGGAGCAAACCTGAAACGTCCaccagagagacaaacagagaggtTGTGACATTGAACAGTAATGACAAACACTAGGGCTGTCTAATTATCCAATCATCTGTTTCGCTTAAACGTACCTGTTCATGTCATTGAATCACAATCACTCTGGGCCGAGTGGTTTAGCACTAGAGTGTTTAAAAGCATTAGTTAGTATcattggcgattttagaccctttaaatttcatctcagcccccataacaattataataataataaaaaaacaaaacaaagcaaaacaatttTAGTAtttcaagttagagtttgcgaacttgtctgttagtgacggagggcaaacaattacaggttcaaaggacttgaaacaggtttaatatcctgtggtgctgtcgccaatgctatgcacctgtaactccgtcaaggaaagggttaacagaaaggtagtttgggccaatcggaggtggttgtgccagactcccacCTTTGGctaatctgtcagagggagagcaggagtgcggatgtgaagtttaacgttggtagtccccagagaagaatttggtaatttcatggcgcagattagaacccaaattgaaacgtatgcaactaaaattgctgaatgttggtcaaattggtcgttattactgtgacttataaagtgtcgGAGAATCTACCTTCAACACGAGGAGAACAAGGCAGAcgggtggtgagacaaagaactgcttcacacctgtgacaaaGTTGCATTTTTCCCATTGGCCGTCgggcctttgaatgcaccaccccgccactaggaggcggtGGAACGATAAAAGGTGTCGGCAATTGTGTTTCTTGGCTCTTCACGGTAATTCAGTTTACTGACAGGAGACGCAGCTGTTCGGACTAGCTAGCCAAcgtcacctcgctggtcgagattGAGCTGGGACATTTAATATCTTTCGGATATAAAAGGGATCCGAGGGGATTGACCCAGTATCTCCTcacatctgcagcgggtttaatcatcCCGGATTCAAGGAAACAGGACAACATTCCCGTTTTCTTGCTGTCGACTTGGACCGCGTATCGTCCACTGCTCTGGACGAAACCGGCCGTTAACCTCTGGCGAGAGATTAACTGACAAACGACCACAGTAAGGAGgcttttacacagttctgggcagactaTAGAATTggtgtgtttggtttgtttaatgagcaaagggttcgctacaacttgttgccattaatgtgatctgtgatTCTAttcatgtactggtccatatgtgattattaatctgtttctgtgaatgtatcattgatcacgatactgttgatatgttgtgttgagtagcttggtaaaactgtaattataccatggtctggttgaatactcgattctgattggctgcagggtgtccattaaaaagtgatataggacacctactaaaggagttcggtgaaactgactgttaaCTGTActatatgaatgcgctacattgaatcaaaaaggaaatttggatttattatttccaaatcgtcctctgaacaccacaggatggtgctaaaacacacaggctgcaagaagtaagttctactggccctctggactgactcagtttcacagagaataacgttatctcacatctcgttcactgttcaggtcgctgcttcaggctgcgccgctgcagccgacagtaacgttacacatcgcggatcaaattcttcgtaaaagtcgttatattgttttggggacgatgacatggctggatagctagcttgtcttgttgttcaacatactgtcaaattatttttactgattgccaactgtacacaaattttattgactttggatcttgctagcatagcgttagctttctggctcgtagctaaactgaaggcttctatcagctgagcggactatataaatatctccggttgctaagggaggcaagtcgtacctaaggttcttcctaattcctggtggagagaacaacgtttgcattgcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209410 True 4031 lncRNA 0.40 2 13028132 13034382

Neighbor

gene id symbol gene type direction distance location
gprc5ba gprc5b,LOC103360712 coding upstream 75894 12938684 ~ 12952238 (+)
proza NA coding upstream 96812 12923370 ~ 12931320 (+)
LOC120574877 LOC103393031,LOC103469206,LOC105930142,LOC107092540,LOC104925717,LOC108239269,LOC106518725 coding upstream 155217 12864935 ~ 12872915 (+)
mfsd13al LOC104947686,LOC100692111,LOC102297699,LOC101482249 coding upstream 168974 12854029 ~ 12859158 (+)
sdr42e2 LOC103360721,LOC100712049 coding upstream 186787 12817115 ~ 12841345 (+)
LOC120575071 dnaaf5,LOC102780779 coding downstream 389163 13423545 ~ 13448411 (+)
LOC120574400 gde1 coding downstream 414245 13448627 ~ 13454217 (+)
LOC120574401 NA coding downstream 420110 13454492 ~ 13460827 (+)
glis2b glis2,LOC102778126 coding downstream 568446 13602828 ~ 13631755 (+)
dnaja3a dnaja3,LOC102777832 coding downstream 714538 13748920 ~ 13754367 (+)
LOC120574709 NA non-coding upstream 32572 12991903 ~ 12995560 (+)
G154494 LOC100710707 non-coding upstream 46497 12980253 ~ 12981635 (+)
LOC120574706 NA non-coding upstream 123314 12889419 ~ 12904818 (+)
G154447 NA non-coding upstream 200555 12782774 ~ 12827577 (+)
G154410 NA non-coding upstream 293220 12734683 ~ 12734912 (+)
G154555 NA non-coding downstream 83012 13117394 ~ 13117721 (+)
G154586 NA non-coding downstream 199731 13234113 ~ 13234321 (+)
G154602 NA non-coding downstream 234537 13268919 ~ 13269290 (+)
G154603 NA non-coding downstream 321841 13356223 ~ 13405694 (+)
G154634 crebbp,LOC108247643,LOC106518707 non-coding downstream 439777 13474159 ~ 13475448 (+)
LOC120574968 LOC102294452 other upstream 1716 13016959 ~ 13026416 (+)
G154461 NA other upstream 181535 12843423 ~ 12846597 (+)
G154254 NA other upstream 912940 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 934574 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 1802883 11207041 ~ 11225249 (+)
vasnb vasn other downstream 621633 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 734637 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 735321 13769703 ~ 13769776 (+)
G154743 LOC102293104 other downstream 812757 13847139 ~ 13854286 (+)
si:dkey-282h22.5 NA other downstream 1946854 14981236 ~ 14984745 (+)

Expression


Co-expression Network