G154603


Basic Information

Item Value
gene id G154603
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13356223 ~ 13405694 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209514
GGATTTCAGAAGCTTATCTTTATTTGCTCAAGATGGTTTGATAGATGAAAGAAAGACatacacagagggagagacagagaataTAGAAAGATTCTTTTCATAAGGTCCCATTTTATACAACATCAGTCGCTGGGTCAGTTGTGCAACTTTGACAGCTTACAGTAGATCAAAGGAAAGCAACACAAGTAtattttttacttctttttatatatttatagcaTATAAGTCATGTCTTAAAAACCGCTAAATCAAACCAAACGTTACAAACTCTAAAGTGGTGCAAAAGCTTTCATCTAGCAATTTAACACAGAACAAAatcagcttaaaaaaaaagcatcaggcaagacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtg
>TU209515
GGATTTCAGAAGCTTATCTTTATTTGCTCAAGATGGTTTGATAGATGAAAGAAAGACatacacagagggagagacagagaataTAGAAAGATTCTTTTCATAAGGTCCCATTTTATACAACATCAGTCGCTGGGTCAGTTGTGCAACTTTGACAGCTTACAGTAGATCAAAGGAAAGCAACACAAGTAtattttttacttctttttatatatttatagcaTATAAGTCATGTCTTAAAAACCGCTAAATCAAACCAAACGTTACAAACTCTAAAGTGGTGCAAAAGCTTTCATCTAGCAATTTAACACAGAACAAAatcagcttaaaaaaaaagcatcaggcaagacgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209514 False 406 lncRNA 0.36 2 13356223 13405694
TU209515 True 416 lncRNA 0.36 2 13356223 13379215

Neighbor

gene id symbol gene type direction distance location
gprc5ba gprc5b,LOC103360712 coding upstream 403985 12938684 ~ 12952238 (+)
proza NA coding upstream 424903 12923370 ~ 12931320 (+)
LOC120574877 LOC103393031,LOC103469206,LOC105930142,LOC107092540,LOC104925717,LOC108239269,LOC106518725 coding upstream 483308 12864935 ~ 12872915 (+)
mfsd13al LOC104947686,LOC100692111,LOC102297699,LOC101482249 coding upstream 497065 12854029 ~ 12859158 (+)
sdr42e2 LOC103360721,LOC100712049 coding upstream 514878 12817115 ~ 12841345 (+)
LOC120575071 dnaaf5,LOC102780779 coding downstream 17851 13423545 ~ 13448411 (+)
LOC120574400 gde1 coding downstream 42933 13448627 ~ 13454217 (+)
LOC120574401 NA coding downstream 48798 13454492 ~ 13460827 (+)
glis2b glis2,LOC102778126 coding downstream 197134 13602828 ~ 13631755 (+)
dnaja3a dnaja3,LOC102777832 coding downstream 343226 13748920 ~ 13754367 (+)
G154602 NA non-coding upstream 86933 13268919 ~ 13269290 (+)
G154586 NA non-coding upstream 121902 13234113 ~ 13234321 (+)
G154555 NA non-coding upstream 238502 13117394 ~ 13117721 (+)
G154535 NA non-coding upstream 321841 13028132 ~ 13034382 (+)
LOC120574709 NA non-coding upstream 360663 12991903 ~ 12995560 (+)
G154634 crebbp,LOC108247643,LOC106518707 non-coding downstream 68465 13474159 ~ 13475448 (+)
G154639 NA non-coding downstream 78345 13484039 ~ 13484718 (+)
G154661 LOC106942609 non-coding downstream 86891 13492585 ~ 13493861 (+)
G154682 NA non-coding downstream 183823 13589517 ~ 13592634 (+)
LOC120575454 NA non-coding downstream 540912 13946606 ~ 13954723 (+)
LOC120574968 LOC102294452 other upstream 329807 13016959 ~ 13026416 (+)
G154461 NA other upstream 509626 12843423 ~ 12846597 (+)
G154254 NA other upstream 1241031 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 1262665 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 2130974 11207041 ~ 11225249 (+)
vasnb vasn other downstream 250321 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 363325 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 364009 13769703 ~ 13769776 (+)
G154743 LOC102293104 other downstream 441445 13847139 ~ 13854286 (+)
si:dkey-282h22.5 NA other downstream 1575542 14981236 ~ 14984745 (+)

Expression


Co-expression Network