G154634 (crebbp,LOC108247643,LOC106518707)


Basic Information

Item Value
gene id G154634
gene name crebbp,LOC108247643,LOC106518707
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13474159 ~ 13475448 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209551
CCTCGCAGACGGTGCAGTGCCAGCGAGTCTCCACGTGGTGCTTGCACTCATTGCAGGTGTACACAAAGCGGTCCTGGCCTTGGTTGTGCAGCTCTACCAACATACACATTGTGCTCCATTTGCATCTTCTCAGTGAGCTGAACTCCCAGTGCTTGTCCCTGGCCAAAGTCAGAAAGGCATCACGGCCATCCATCAGGTCACAGGTCAACAGAGGGTCGGGGTCCATAATGGGTGGCAGGGTGTTAATGACTGGCCCAGCATGGAGGTGGATAACAAAAAACACCTCCTTATGTTTCTCCATCGTGGCATAGAGCTTCTGGGACAGGTCATTGGCTACATTCGGCATCCCAGGCTTTTTCTTATTGGCTCGGCTGACGCTGCTcttgtttttgttggttttcttgttattcttttttttggcattCTTGCTGTCAGCTTGGGCTCCCTCTGTCGTCTCAGTGGAGGCCGTGTTCTCCTCCTTCTTccgctcttcctcctcctgctctagCTCCTTGATGCTCTCCTCCAGTACATTAGGCCAAAAGTCACCCTCAAAGTACGGCAGCTCATTGGCACTGGTTAGCCGGTCTTCTGTTGCCTGTTTGAAAATGTcctgaacacagacacacaaaacttCCATCAGGCAAGCTAG

Function

symbol description
crebbp Enables several functions, including DNA-binding transcription factor binding activity; p53 binding activity; and transcription coactivator binding activity. Involved in several processes, including histone glutamine methylation; peptidyl-lysine acetylation; and regulation of transcription by RNA polymerase II. Located in chromatin; cytoplasm; and nuclear body. Implicated in Rubinstein-Taybi syndrome; acute lymphoblastic leukemia; and acute myeloid leukemia. Biomarker of Huntington's disease.

NR:

description
PREDICTED: CREB-binding protein-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209551 True 652 lncRNA 0.52 3 13474159 13475448

Neighbor

gene id symbol gene type direction distance location
LOC120574401 NA coding upstream 13332 13454492 ~ 13460827 (+)
LOC120574400 gde1 coding upstream 19942 13448627 ~ 13454217 (+)
LOC120575071 dnaaf5,LOC102780779 coding upstream 25748 13423545 ~ 13448411 (+)
gprc5ba gprc5b,LOC103360712 coding upstream 521921 12938684 ~ 12952238 (+)
proza NA coding upstream 542839 12923370 ~ 12931320 (+)
glis2b glis2,LOC102778126 coding downstream 127380 13602828 ~ 13631755 (+)
dnaja3a dnaja3,LOC102777832 coding downstream 273472 13748920 ~ 13754367 (+)
ccnf ccnf coding downstream 309388 13784836 ~ 13795684 (+)
abca3b NA coding downstream 321280 13796728 ~ 13827791 (+)
LOC120575447 LOC107083151 coding downstream 357123 13832571 ~ 13838091 (+)
G154603 NA non-coding upstream 68465 13356223 ~ 13405694 (+)
G154602 NA non-coding upstream 204869 13268919 ~ 13269290 (+)
G154586 NA non-coding upstream 239838 13234113 ~ 13234321 (+)
G154555 NA non-coding upstream 356438 13117394 ~ 13117721 (+)
G154535 NA non-coding upstream 439777 13028132 ~ 13034382 (+)
G154639 NA non-coding downstream 8591 13484039 ~ 13484718 (+)
G154661 LOC106942609 non-coding downstream 17137 13492585 ~ 13493861 (+)
G154682 NA non-coding downstream 114069 13589517 ~ 13592634 (+)
LOC120575454 NA non-coding downstream 471158 13946606 ~ 13954723 (+)
G154777 NA non-coding downstream 574383 14049831 ~ 14056966 (+)
LOC120574968 LOC102294452 other upstream 447743 13016959 ~ 13026416 (+)
G154461 NA other upstream 627562 12843423 ~ 12846597 (+)
G154254 NA other upstream 1358967 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 1380601 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 2248910 11207041 ~ 11225249 (+)
vasnb vasn other downstream 180567 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 293571 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 294255 13769703 ~ 13769776 (+)
G154743 LOC102293104 other downstream 371691 13847139 ~ 13854286 (+)
si:dkey-282h22.5 NA other downstream 1505788 14981236 ~ 14984745 (+)

Expression


Co-expression Network