G154682


Basic Information

Item Value
gene id G154682
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13589517 ~ 13592634 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209616
TTCTGTCTTTACAAAGGCACAAGCCTCTTTATCCCCAAAACATttctcttaaaaacaaaacaaagacaaaaaatagcTTCTTGACGACCATATGCACCGAAAggttaacaaaaaaaagattacaGAGAACAGacaaaaggagagggagaggagggagctGCGAAATGTAAAAGGGACACAAGATATAATGACAATAGATAAACAAAGATGGCATAAAGGATtttgcaaaaaacaacaaaaaagatgaGGGGCTAACAGGACAAGATGTAGGAGGTCTGGACATGGAGGAAAAGGGGGATACACAGCTGTGCGGCTTTTAATCATATCCTAAAGAGCTTCAGCTGAGGAGATGCCCCTTTATACAAAAGAAAGAGGCAGACTCCAGTATAGTACAGTAAGTGCTTTGTAATTTTGACCCCATTTAATTATCCCCAGGCCCAACCCACTCATCTGACAAGCTGATATGTCAATGTAACGTTTCGTAACACACAGAACAGAGTGTAAAACACAGATGGAAATAGAACAGCTCTGGGTTTCAGCAGAAAACTATCAAATGCAGATACTCAAGAGTAAAAAGCAGAGCTTTCAAAACACGTTTTCCATATCCAGGAATCCCCTGCCTAAAGTGATAAGTACTAGGAAAATGTCCCATGATTTAATTTGACAGATGCGTCACTCATTTTCAGTGCAGCTGACatcaatatttctttaaagggCAATTCCATGACATAATCATGATAGATGTGGTGCGTTCAATTGAACGCATTATCTGTCCAGCAGTTCAAAGCTCCATCTATGCATTAATGCAGGGGATTCTAATAATGAGTTTGTCATTTAACGCAATTCTAAAATAGCAGTGATGTGTCAAAAGCACTAAATGTAAGTGTAGTCTCTAAATAGACCAGGTTTCACTTTTGAAAAGTAACTGTAACATTTTATGGAATGTCAACATTTCAATATGGAAATTTTTACCCCACACATCTGGCTTTTATGCACACGAAGGGGCCAATGGttgcaaatacattttcaatacTTATATCAAACAAATATCAGGAGTGCTTGAATGTAATTGGTATACCAGCAACCTGTTCCATGTTTGTGGCAAACATAATCAAACAAAGCATAAGTGAAATAGACATAATAACTGTGAGTATATATTCTAACACACCCTGGGTGTTGACAAGCCTGTTTGGAAAGCTGAGGGGAAAACCGGAGGGATTCCAGTGGCCACCAAACGGCGCAGATTAAGTGTTAAGGTACGTCTCTCAGACCCCGGGGGTTCTGTTAAGGTTGGCTTCACAGTGCCTCCCTGCACCCACGGGCTATTAGTAAGGCAAGCTGCTGCCTCTCTCAGCTCCATGTCTTAATGTCTGTCAACCAACAGTTCCAGGCAAAACATATGATCAGAGCAGTGACGTGTAAATAGCATGGTACGCTAGACAAAGAGCACGCAAGAGGACAAATAATCTATGCAAGTAAATGCATAGAGCATGTGTGGTCAACCCAGTCACCTCTATGGCACATTCAAACAATTTTACCGGGCATGTTCCTCATATTTAAAGTATTATCTGCTTTGATAGATGTCTCAACATTTGGACAAGAAACAACAACGTTAAGGGCTAAATAAACAAGCCCTAAATTTGAGCTAACAAGTGATTGTATGTCAGCCAcatttgtatgtgtgagtgttgtGTGCACATACACACGTGCCTTTATTTCAAGGTAAAAGCGGTGTTGTTGCAGACTGCCAGAGTCTGGGACACCATTGAGCCCTGCTGATTCAAAACGCtaaatctctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtgcCCTCAGATTATCTTATTTAACCAAGTGCTTTTAAATTCAAGAGGGGAGCGTGTCAAGAAATGCCAAAGCACTGATATTAGTTTGTCAGGCCATGAGTAAAAAGAAGAACATGCCAATACATATGTGAACTTACTGGGAACCCAGCCCAGTAAAAAtggcaacaaacaaaacaaaaagaatagAGCTGAGAACCAGTAAGCACACTCTCTCCTCCCGAGCTTCGCTTCATTTCCTGTGAGCACCAGTCAGCCATGAAAACTGCTTTTTAATTCCTCTCGTTGTGGTGCtcttttgtgggtttttttccaGTACAATCGCTTAACTTGCTGGCTGAGGGAGCCTTAgagaaacaaaacatgaaaaagtaGACTTCACAAGAGTAAAACAACATATTCTTTCATCCAGAAGCCTAAAAGGTGGAACTTTGAGACAGCCTTGTTAGCTTACAGTGTCTCTCCAAACAGCTTCAGAGAAGGAGGATGTTCAtcttaaaacaaaaatgcactGCTGTTGGGTGGTGATGACCCACACTGCTGGCTTCTTTGACTCCTGTTTCGTGGATCAGTCCCATTGCTTCAGGGCCGAATAAAAGAGAACAGTCCTGGTGATAATGGTGATGTTTAGCAGATATTCTGACGGAGCATTTATGGATCAGTCGGTGAAGTAGCCACTCTAACAACCTTTCTATAAACTAATGAACAGACaagagcttgtgtgtgtggagagcagGGGGCTAAAGATAAGCAGAGAAAAAGACGCAAGAGAGACTGCATGTATGAGTGTCTAAGTGTAAACCTATTTGGGCTGCCTATCAAAGTACAACATGGAAGAGTGTactgaaaagaaacaaaacaacgaGTGCTTCAATCTGTCTACCAGCCCTATTAATGTCCACTAAACAAGAGTGCTGTGGGTTTGAAGCCTCCTGTAGCCCTGGTCTGCTGGGGccttttgtgtgtaagtgtgtgcgcGTATGTAAGTGTACGGCGTGCGAGACTTCGAGGATGAACTCAGGGCAGTGAACAGTCGTCGGGCCCGTCGCTGTTTGAGGCCGTGTCTGAGCCCGCAGCGTCGGAGGGGACACGCCCTGAAGTGACGATGACCGCTCTCCGCTGCTCTTCCTCGCCGACACAACCCTTTCCCTGGGTGCCCTCGAT

Function

GO: NA

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU209616 True 3035 lncRNA 0.43 2 13589517 13592634

Neighbor

gene id symbol gene type direction distance location
LOC120574401 NA coding upstream 128690 13454492 ~ 13460827 (+)
LOC120574400 gde1 coding upstream 135300 13448627 ~ 13454217 (+)
LOC120575071 dnaaf5,LOC102780779 coding upstream 141106 13423545 ~ 13448411 (+)
gprc5ba gprc5b,LOC103360712 coding upstream 637279 12938684 ~ 12952238 (+)
proza NA coding upstream 658197 12923370 ~ 12931320 (+)
glis2b glis2,LOC102778126 coding downstream 10194 13602828 ~ 13631755 (+)
dnaja3a dnaja3,LOC102777832 coding downstream 156286 13748920 ~ 13754367 (+)
ccnf ccnf coding downstream 192202 13784836 ~ 13795684 (+)
abca3b NA coding downstream 204094 13796728 ~ 13827791 (+)
LOC120575447 LOC107083151 coding downstream 239937 13832571 ~ 13838091 (+)
G154661 LOC106942609 non-coding upstream 95656 13492585 ~ 13493861 (+)
G154639 NA non-coding upstream 104799 13484039 ~ 13484718 (+)
G154634 crebbp,LOC108247643,LOC106518707 non-coding upstream 114069 13474159 ~ 13475448 (+)
G154603 NA non-coding upstream 183823 13356223 ~ 13405694 (+)
G154602 NA non-coding upstream 320227 13268919 ~ 13269290 (+)
LOC120575454 NA non-coding downstream 353972 13946606 ~ 13954723 (+)
G154777 NA non-coding downstream 457197 14049831 ~ 14056966 (+)
LOC120575155 NA non-coding downstream 515147 14107781 ~ 14241105 (+)
G154811 NA non-coding downstream 692540 14285174 ~ 14287984 (+)
G154824 NA non-coding downstream 733648 14326282 ~ 14326489 (+)
LOC120574968 LOC102294452 other upstream 563101 13016959 ~ 13026416 (+)
G154461 NA other upstream 742920 12843423 ~ 12846597 (+)
G154254 NA other upstream 1474325 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 1495959 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 2364268 11207041 ~ 11225249 (+)
vasnb vasn other downstream 63381 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 176385 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 177069 13769703 ~ 13769776 (+)
G154743 LOC102293104 other downstream 254505 13847139 ~ 13854286 (+)
si:dkey-282h22.5 NA other downstream 1388602 14981236 ~ 14984745 (+)

Expression


Co-expression Network