G155036 (ccdc137)


Basic Information

Item Value
gene id G155036
gene name ccdc137
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14967943 ~ 14969536 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU210097
CTCCTTCTTTTTCTCAGACTTGCCCGTGTCTGCGGGCCTCTCTTGTTTGTCTGCATCCAGCTCAGGCTTTCTGTCTACTTGGTTCTTTGTGAGAAAGAGGACGTGTTTTGTCTCATTCTCCATGCGCCGTAGGTATGCTTTCTCACTTTCCGCCTTTCCCCTCCTGAAATGTGGGACAGGTATGTCTCCACTTTCGGAATCGTCTGGTTTACCTTTAGGGGAGATGGCTTTTTGGTGTTCAAGGGTCCAGTTTTCATTCTCTCCTTGCTCTTCATTATCTCTCGGAGTTTAAAGGGGATGTGTTCGAGGTGGTCTTGTTTGGCTTTCTTGGGTTTACCATCTCGTTTGAGCTTTTTATCACTGTTTTTTAGTTCGCCAATATACtttcttcaataaagttaaatgaATCATTAAACTATGTTGACGGAGCTACGGCATCTAAAAAATACTCAGGCCAACTTTTCCCACACAGAGATTCCGCCTAGCCCTAGTGGAAGTGTTTTATCCCGGAGTGATACACCAACC
>TU210099
CCAACTTTTTCTGATGTAGCCTCTGTAATCTGACTTTATCATGCTCCTTCTTTTTCTCAGACTTGCCCGTGTCTGCGGGCCTCTCTTGTTTGTCTGCATCCAGCTCAGGCTTTCTGTCTACTTGGTTCTTTGTGAGAAAGAGGACGTGTTTTGTCTCATTCTCCATGCGCCGTAGGTATGCTTTCTCACTTTCCGCCTTTCCCCTCCTGAAATGTGGGACAGGTATGTCTCCACTTTCGGAATCGTCTGGTTTACCTTTAGGGGAGATGGC

Function

symbol description
ccdc137 Is expressed in immature eye; optic tectum; and paraxial mesoderm. Orthologous to human CCDC137 (coiled-coil domain containing 137).

NR:

description
PREDICTED: coiled-coil domain-containing protein 137

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210097 True 525 lncRNA 0.45 3 14968183 14969536
TU210099 False 271 lncRNA 0.48 2 14967943 14968410

Neighbor

gene id symbol gene type direction distance location
LOC120574573 LOC104944233,LOC103373117 coding upstream 6838 14957489 ~ 14961105 (+)
LOC120575419 LOC103373137,LOC102304397,LOC102213496 coding upstream 47261 14917820 ~ 14920682 (+)
LOC120575420 LOC104944239,LOC104925055 coding upstream 53142 14908491 ~ 14914801 (+)
zgc:112148 LOC104944227,LOC103373156 coding upstream 68151 14896424 ~ 14899792 (+)
LOC120573965 NA coding upstream 72311 14891067 ~ 14895632 (+)
LOC120575438 LOC102783976,LOC102302891,LOC106674513,LOC106675063 coding downstream 23547 14993083 ~ 14998261 (+)
aatka LOC103361234 coding downstream 43257 15012793 ~ 15043696 (+)
sdk2a LOC103361238 coding downstream 222322 15191858 ~ 15276960 (+)
cdc42ep4a LOC104940296,LOC100697350,LOC103361240,LOC102780692 coding downstream 311105 15280641 ~ 15293971 (+)
LOC120575445 LOC104940295,LOC103361241,LOC104959451 coding downstream 341309 15310845 ~ 15313571 (+)
G155032 LOC104944234,LOC102212559,LOC101473443,LOC102786862,LOC102303581 non-coding upstream 13642 14952333 ~ 14954301 (+)
G154982 NA non-coding upstream 137779 14829502 ~ 14830164 (+)
LOC120575161 NA non-coding upstream 229227 14730618 ~ 14738716 (+)
G154883 NA non-coding upstream 496956 14470512 ~ 14470987 (+)
G154881 NA non-coding upstream 504480 14463262 ~ 14463463 (+)
G155040 NA non-coding downstream 1716 14971252 ~ 14971468 (+)
G155041 NA non-coding downstream 1986 14971522 ~ 14971790 (+)
G155050 NA non-coding downstream 31472 15001008 ~ 15003646 (+)
G155077 NA non-coding downstream 85815 15055351 ~ 15115448 (+)
G155104 NA non-coding downstream 203556 15173092 ~ 15173363 (+)
G154743 LOC102293104 other upstream 1113657 13847139 ~ 13854286 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other upstream 1186258 13769019 ~ 13781685 (+)
trnat-agu_6 NA other upstream 1198167 13769703 ~ 13769776 (+)
vasnb vasn other upstream 1275640 13656015 ~ 13692303 (+)
LOC120574968 LOC102294452 other upstream 1941527 13016959 ~ 13026416 (+)
si:dkey-282h22.5 NA other downstream 11700 14981236 ~ 14984745 (+)
LOC120574428 NA other downstream 16164 14985700 ~ 14986913 (+)
LOC120575440 LOC102304323 other downstream 22477 14992013 ~ 14992508 (+)
G155088 NA other downstream 166255 15135791 ~ 15139706 (+)
ndel1b ndel1,LOC104940291 other downstream 397384 15366920 ~ 15404605 (+)

Expression


Co-expression Network