si:dkey-282h22.5


Basic Information

Item Value
gene id si:dkey-282h22.5
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14981236 ~ 14984745 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU210109
GGGAAAGATTCAGGGAGATGGGGGGAGGCAGTTATAAGAGAGTGTTTCCCAGGTTTCAGTGTGTCACTGTTAAAGGATCGTACCACAGAGTGTGTTCTGCTGCTGTGACCTGGCAAGACCCCTGGCGCTACTTCACAGACAGgTGAGGAAGGTGATGAAGGAGATTCTGGTAATGCTCTGCATGATCTTAACATGCAGAGCTCAGAAATGGAACCACGAAACCTCACGTTGGGACGCCAAAGAACACGCCAACGGCAAGACTTGTTCCAACCTGACCCAGGTACTGGACAACTGGAAATTTGCTATTCTAACCCAAGTGAAAGATCTTCTGATCAATGACCACGCTTCTGTCCTGCCCGAATACAACAGGATCCCGCCTCTGTCAGATGCCCTGGGAGACCTCTACAGGCAGTTTAACACTCTAAAAGACGAGCTCGGGAGGCTTACCTCAAAGTTTGACAGTGTGGAGGGTTTTGTGGACGACCTCAAGTACGGCAGATCCGCTCTGCCTCAGCGGC
>TU210110
aaataccaatgCTCATGTATCAGAAAAGAGTTAATGGgtttataaatatttttcagAAGATTAGTTTGTCTAATTTTATCAATGAGTGTGATGTCAGAATAGGTCACATAAATAAGAACGACTTAGTGATGCATGGTGTAGAAAAGATGATTTTCCAAATGTGTTTATCTTAGCCTTTCTGTACAAAGTCACTTTTAACCACAAGGTGGAAGCATTGATCAAATTAACTAGACTGTCATCCTGCTGCTCTATGTGTATCAATAGCTTAACATAAAGTCTAGAGGTGTGATATAACACAATATATACATGCCTTTTAGACATTGATTAACATTGTATTACCATTTGTTTGTATTTGAGTTTTGTCGCCcaaatgattattaaaaaatagATTAATTTGCAAGTTAAATTAATCAACATTTGCTACATTGTAAATATACTACATTCAGTAACATTATGAGGACCAAGCACTGTCCAACCATTgggaaaaatgtgttcttaagcATGTGAGGGACACACTGACATGGACAAaaagggatcgaaccaccaaccctTTAATGAATGAAAGTGGCTGAGATACAGCTGCCCCCATTAGCAATGGAATACAACAAGTTTTCAAAcacacttttttaatttttatatttattttaatataagcCTAATGTGTTTTCCTCTCTGTGATATCCTGATTAGACTGCCGTAGAATTTCAAAATGGACCATAGCATAAGTAAGATCTTGACGAATTTTGGAGactaaaaacaaaaattcaCCTGTTCGTTATTGTTTCTCTCTGCCACAACtaagataaataaatgaataagcaGTGAAAATACTGTAACAGCCCTCTACTGTACAAGTTCAGAAGTAATGTTGATAAAAATgttagggggggggggtacagCTGGAAGATTTAATCAATACAATGGACAACAGTATATATCAAGGTTGATATAATGaaagcagtggttttacccctGGGGTTAACCAATAAAGTGACAAAGTAACAATTGCATAATGATGCatgtgacatttttgtcaattttgttgTGAAACTTGATTAATATTGTTTAACCTTGGTTACTGCCAGTGTCAGGATGTTAGAATAATCAGCAAATTTGCAAATGAAACTGAGTTTTCATCCTCTGTCAGTGAAGCATCACCTCtcatctcctccctctcttcctttccagGATGCACCTGCAGGCCTCCTCTCCTTATTTGTAGCTCCATGTAAATGAAGAGGTCAAGTGTCAGCTCTCTGTACAATAAAAGGAAACTGTCTGTAACTGGAAACACACTGATGGATTAATTATTAACATGTTATCAATCACAGACAGTTTACTTCTTATTTGAATGAATTATATTCACGTGTGCACTGTGGGCAAGTTTATATCCAgc
>XM_039824684.1
TGTGTCACTGTTAAAGGATCGTACCACAGAGTGTGTTCTGCTGCTGTGACCTGGCAAGACCCCTGGCGCTACTTCACAGACAGgTGAGGAAGGTGATGAAGGAGATTCTGGTAATGCTCTGCATGATCTTAACATGCAGAGCTCAGAAATGGAACCACGAAACCTCACGTTGGGACGCCAAAGCAGAACACGCCAACGGCAAGACTTGTTCCAACCTGACCCAGGTACTGGACAACTGGAAATTTGCTATTCTAACCCAAGTGAAAGATCTTCTGATCAATGACCACGCTTCTGTCCTGCCCGAATACAACAGGATCCCGCCTCTGTCAGATGCCCTGGGAGACCTCTACAGGCAGTTTAACACTCTAAAAGACGAGCTCGGGAGGCTTACCTCAAAGTTTGACAGTGTGGAGGGTTTTGTGGACGACCTCAAGTACGGCAGATCCGCTCTGCCTCAGCGGCTGCACCAAGGTCCTCGGGCAAGGATGCACCTGCAGGCCTCCTCTCCTTATTTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210109 False 518 TUCP 0.51 4 14981236 14983283
TU210110 True 1396 lncRNA 0.35 1 14983350 14984745
XM_039824684.1 False 518 mRNA 0.52 5 14981295 14984571

Neighbor

gene id symbol gene type direction distance location
LOC120574573 LOC104944233,LOC103373117 coding upstream 20131 14957489 ~ 14961105 (+)
LOC120575419 LOC103373137,LOC102304397,LOC102213496 coding upstream 60554 14917820 ~ 14920682 (+)
LOC120575420 LOC104944239,LOC104925055 coding upstream 66435 14908491 ~ 14914801 (+)
zgc:112148 LOC104944227,LOC103373156 coding upstream 81444 14896424 ~ 14899792 (+)
LOC120573965 NA coding upstream 85604 14891067 ~ 14895632 (+)
LOC120575438 LOC102783976,LOC102302891,LOC106674513,LOC106675063 coding downstream 8338 14993083 ~ 14998261 (+)
aatka LOC103361234 coding downstream 28048 15012793 ~ 15043696 (+)
sdk2a LOC103361238 coding downstream 207113 15191858 ~ 15276960 (+)
cdc42ep4a LOC104940296,LOC100697350,LOC103361240,LOC102780692 coding downstream 295896 15280641 ~ 15293971 (+)
LOC120575445 LOC104940295,LOC103361241,LOC104959451 coding downstream 326100 15310845 ~ 15313571 (+)
G155041 NA non-coding upstream 9446 14971522 ~ 14971790 (+)
G155040 NA non-coding upstream 9768 14971252 ~ 14971468 (+)
G155036 ccdc137 non-coding upstream 11700 14967943 ~ 14969536 (+)
G155032 LOC104944234,LOC102212559,LOC101473443,LOC102786862,LOC102303581 non-coding upstream 26935 14952333 ~ 14954301 (+)
G154982 NA non-coding upstream 151072 14829502 ~ 14830164 (+)
G155050 NA non-coding downstream 16263 15001008 ~ 15003646 (+)
G155077 NA non-coding downstream 70606 15055351 ~ 15115448 (+)
G155104 NA non-coding downstream 188347 15173092 ~ 15173363 (+)
G155180 metrnl non-coding downstream 462139 15446884 ~ 15449558 (+)
G155197 LOC104918611,LOC104960327,LOC102777936,LOC100691075,LOC101487576 non-coding downstream 522308 15507053 ~ 15508319 (+)
G154743 LOC102293104 other upstream 1126950 13847139 ~ 13854286 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other upstream 1199551 13769019 ~ 13781685 (+)
trnat-agu_6 NA other upstream 1211460 13769703 ~ 13769776 (+)
vasnb vasn other upstream 1288933 13656015 ~ 13692303 (+)
LOC120574968 LOC102294452 other upstream 1954820 13016959 ~ 13026416 (+)
LOC120574428 NA other downstream 955 14985700 ~ 14986913 (+)
LOC120575440 LOC102304323 other downstream 7268 14992013 ~ 14992508 (+)
G155088 NA other downstream 151046 15135791 ~ 15139706 (+)
ndel1b ndel1,LOC104940291 other downstream 382175 15366920 ~ 15404605 (+)
arl16 arl16 other downstream 525348 15510093 ~ 15512810 (+)

Expression


Co-expression Network