G155077


Basic Information

Item Value
gene id G155077
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15055351 ~ 15115448 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU210178
acacacacacacacacacacacacacacacacacacacacacacacacacacacacacacattatacaAGCAAACATAAAATGGTGTGTAGGAACAGACTTATATTAACCATGTAGAGCTTGCTTTGCTGACCATGGATTAAATCTCTTAAATATTTTCATGCTCTAAAATTCATCCATGGAGACCAGCCAATGTGCATGCATAAACGATCAGGGGTCAAGGTCACGCAGTCTCTGTGCACTTAGTCTTCCCCAGGCCAGAACATAAAAacaaggcaaaaaaaaagaaataacttAATCATTTTCCATGTGCATGCATAATTAACAGTTGGGGAAAATAACAGGATGCTGtttaaattgaattgatttTGTTTATGCTTCCTCTCATCAAATATGTATAAATGTATGAGCATTTTCTAGGACACCATCATCATCTACCTTCCTTTCAAATGCAGCATGTGTTTGCACCATGCAGTTTTTGAGTAATGATGTACAGGTGCAACAAGTTTACTTACATGTTTTGCATACTGTCCCAAATTCTAATTATTTTACTGGAGACCCGTGCTTTTTATAATCTACTTTTGTGTGGAGGACTGGTCTTCTTATTAATAACAAGGCGGGTAGAATTATTGAGTAAATTTACCTCAGCTCACCTGGGACATAACATCTGATAGTGACAGAGAGATGCATGCTGGAGAAAAGCTATACTCAACTATTTGATTTTAATGCAGGGTCATGTTCAACTATAAACTAAGCCACAGACACAGTCCCAGGCATTGGTAATCAGATTTTACAACTGCAGAGAAGCTCTTCATTCACAGAGAACCACAAGCGAGGTCTCCATTTCACGCCTGTGTAGTTAATTTCAGGTTTAAATCAgctgtcattccccctctgcTTCATTTTGTCTTCACTGCATCACTTAGAACAGCTGCCCAGATGTGAAATCCATTGGGATAATCCACAGATGGGATAATCTACAGGAGGAAAGGAGATCGAGAAGAGGAGACAGTGGGGATGGAGGGAGGCTGGAAGCAAGGGTTTACTCTTTGTACCCCAGACAGTGCCCCTGATAGGAGCTCCATTAAACACACTAAGCCCAGATGTGCTGAACACATGGTGTACAGACAGGAAGAGATAACAATCTGTCAGAAATAGGGAGGATTGAAAGACAAATGAAGCTGAGCACAACCTAAGAACAGATTTTGAAGAAAGCAAGGCTAGTAATTAATGTGAGAAACAGCTTTGTTTACAATGGCTGGGCTAAGGGTTGATAAACCTAAAACGCAAGGGACTTGTAATCAGCTTTACTGCATCACTGACTAGAGAAAAGCGCCTTCTGTAAACTAAACAAACATAATATACAGACACCCTTTAACCAGGAAAGATGTCAAAGAACACACACTTATTGACAGTAAAACCCTTGGGAAGTAGGAAGCtggtggttaaaaaaaaaaaagaagtatttAAACTAAATACAAGAACCACCACTGCCCACAAATATGTCTATGGGTGCAACTCTACGGGTTAAAAAATAAccaactgatttaaaaaaaagaatacataaataaaaaccaaGTGTGTCAagaattaaaacttttttgtttctctcttcaaaaatacattgttttcTCACCACAGCTGTAGCAGTGCCCGCTCCCAGTGAGGCCCAGCTGAGGATCATAGACAGCACTACAAAAGCCATGATCCTGGAGGAACACAtcaaatgggagagagagagatggggttGACAGggagatacagacacagacagagacacatgggGAAAAGCAGATTAAACAGCTTGTCTTTGTACCGATGATCTCCAGCTCTTTTTCACCTAgttaatttgatttatttttttcagcgttttATTGGTAATTGCCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210178 True 1889 lncRNA 0.40 2 15055351 15115448

Neighbor

gene id symbol gene type direction distance location
aatka LOC103361234 coding upstream 11655 15012793 ~ 15043696 (+)
LOC120575438 LOC102783976,LOC102302891,LOC106674513,LOC106675063 coding upstream 57090 14993083 ~ 14998261 (+)
LOC120574573 LOC104944233,LOC103373117 coding upstream 94246 14957489 ~ 14961105 (+)
LOC120575419 LOC103373137,LOC102304397,LOC102213496 coding upstream 134669 14917820 ~ 14920682 (+)
LOC120575420 LOC104944239,LOC104925055 coding upstream 140550 14908491 ~ 14914801 (+)
sdk2a LOC103361238 coding downstream 76410 15191858 ~ 15276960 (+)
cdc42ep4a LOC104940296,LOC100697350,LOC103361240,LOC102780692 coding downstream 165193 15280641 ~ 15293971 (+)
LOC120575445 LOC104940295,LOC103361241,LOC104959451 coding downstream 195397 15310845 ~ 15313571 (+)
arhgap44a LOC103361248 coding downstream 245318 15360766 ~ 15390530 (+)
atp5pd atp5h,LOC103361245,LOC101487002 coding downstream 313370 15428818 ~ 15433287 (+)
G155050 NA non-coding upstream 51705 15001008 ~ 15003646 (+)
G155041 NA non-coding upstream 83561 14971522 ~ 14971790 (+)
G155040 NA non-coding upstream 83883 14971252 ~ 14971468 (+)
G155036 ccdc137 non-coding upstream 85815 14967943 ~ 14969536 (+)
G155032 LOC104944234,LOC102212559,LOC101473443,LOC102786862,LOC102303581 non-coding upstream 101050 14952333 ~ 14954301 (+)
G155104 NA non-coding downstream 57644 15173092 ~ 15173363 (+)
G155180 metrnl non-coding downstream 331436 15446884 ~ 15449558 (+)
G155197 LOC104918611,LOC104960327,LOC102777936,LOC100691075,LOC101487576 non-coding downstream 391605 15507053 ~ 15508319 (+)
G155212 NA non-coding downstream 428794 15544242 ~ 15544549 (+)
G155257 NA non-coding downstream 545920 15661368 ~ 15731815 (+)
LOC120575440 LOC102304323 other upstream 62843 14992013 ~ 14992508 (+)
LOC120574428 NA other upstream 68438 14985700 ~ 14986913 (+)
si:dkey-282h22.5 NA other upstream 70606 14981236 ~ 14984745 (+)
G154743 LOC102293104 other upstream 1201065 13847139 ~ 13854286 (+)
trnat-agu_6 NA other upstream 1285575 13769703 ~ 13769776 (+)
G155088 NA other downstream 20343 15135791 ~ 15139706 (+)
ndel1b ndel1,LOC104940291 other downstream 251472 15366920 ~ 15404605 (+)
arl16 arl16 other downstream 394645 15510093 ~ 15512810 (+)
rasd2 NA other downstream 411406 15526854 ~ 15528470 (+)
LOC120574525 NA other downstream 771727 15887175 ~ 15891028 (+)

Expression


Co-expression Network