LOC120574126 (LOC101483500,LOC100695608,LOC102213391,LOC102786175)


Basic Information

Item Value
gene id LOC120574126
gene name LOC101483500,LOC100695608,LOC102213391,LOC102786175
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12774893 ~ 12781445 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824235.1
TCGGCTGCACGGtccagtgcattgtgggtaatacCTTAGTCCGCCGCCATATCTGTCTTTCTGTACCGGCTGAAGGAGAGAGACTAGAGTCATGAGAGGAATCCGGGCTCTGAACAATCTCCCCAAACGCTGCTATGCCGCTGCCAGGAGAAGTGAAGCTCTGACTGAACCCCTCACAGGCCGCGCACCGTCCTCAGCTGCACTTCTCCCTTCCCAAAATGTCCAGGTGTCCAAGCTTCCAAACGGTCTGGTGGTAGCATCTCTGGAGAACAATTCCCCCCTGTCCAGTGTTGGTGTGTTTGTAAAAGCTGGGTGTCGCTATGAGACAGTGGAAAACCAGGGCGTCTCTCATGTGCTTCGACTAGCAGCAAACCTGaCTACGAAGGGTGCGTCTGCCTTCAAGATCTGTCGCGGTGTGGAAGCACTGGGGGGCAGCCTGAGTGTGACATCATCAAGAGAGACCACCGTCTACACCGCAGACTGCTTGAGAGATCACCTaGATTTATTATTTGAGTTTTTGGTCAACGTGACTGCAGCTCAGGACTTCCGGCCATGGGAGGTGGACGATCTGACGTCCAGGGTGAAGATCGACAAGGCTCTGGCTCAGCAGTGTCCTCAGATAGGTGTAATTGAGAAGTTGCATGAGGCAGCGTACAAAAACGCCCTGTCCAACTCTCTGTACTGCCCTGACTACATGGTTGGTCGTGTCTCCTCTACACAGCTGCAGTCATTTGTTGAGGACCATTTCACCGCTGGCAGAATGGCTCTTGTAGGACTGGGTGTACAGCACTCCGTCCTGAGGCAAATGGGCGAGGGGCTCTTGAGTGTCCACAGCGGGGCTGGAGCACCTGTGGCTAAGGCTGTGTACCGTGGAGgtgagcTGCGGGTGCAAAACAATGATGACCTGGTCCACGCACTGATTACCAGTGAGGGTGGTGTGACAggtagcgcagaggctaatacCTTCAGTGTGCTGCAAAGGATCCTGGGAGCCGGGCCGCATGTAAAGAGGGGCTCCAACATTACCAGCAAACTGAGCCAGGGTATTGCCAAAGCTACCACACAGCCCTTTGatGCCACAGCCTTCAATGCCTCATACTCTGACTCCGGCCTGTTTGGCGTCTATACCATTGCACAAGCTGACTCTGCAGGAGAGGTAATCAAAGCTGCCATTGCTCAAGTGAGAGGTGTGGCTGAGGGAAACGTATCAGAGGCGGACATCAGCAGAGCAAAGAACCAGGTAAAATCAGAGTACCTGATGTCATTGGAGAGCTCTGAGGGACTGATGGAGGAGATCGGTGCTCAGGCTCTGACCACTGCGGCGTACCAGCTCCCTGACGCTGTTCTCCAGGCTATAGATGCTGTCACCCAGGACGATGTGGTCAAGGCTGCGAAACAATTTGTGGATGGCAAGAAGACCATGGCAGCTAGTGGACACCTGGTGAATACACCGTTTGTGGATGAAGTATGAAGATAAAGTATAAGAACAGTTACTTTTAACTTGAGCATGCTATGCCTAGCTGCTTCAAAAGGAAAGAGGACCTCAAAGCCACAGCCTCCTGCAACAGTTCATTTGATGTCATCATTTGTTCTCTGTCCTGCAGTAAGTGTAAGCACCAACAGGCGGCCGGAGAATCATAATGCaatttctcttttgtttttttgtcaatttaacTGTATATCTATGTAAATTAAAGACAGTAACAACT

Function

NR:

description
cytochrome b-c1 complex subunit 2, mitochondrial

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0046872 metal ion binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K00415 QCR2, UQCRC2; ubiquinol-cytochrome c reductase core subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824235.1 True 1709 mRNA 0.52 14 12774893 12781445

Neighbor

gene id symbol gene type direction distance location
si:ch211-256e16.3 LOC104947690,LOC100695876,LOC102213849,LOC101483797,LOC103360703 coding upstream 753 12766625 ~ 12774140 (+)
anks4b anks4b coding upstream 9231 12761621 ~ 12765662 (+)
dxo dxo coding upstream 21533 12749211 ~ 12753360 (+)
LOC120574005 LOC101485652,LOC100697553,LOC108239271,LOC107376513,LOC106518736 coding upstream 29836 12738248 ~ 12745057 (+)
cacng5b LOC104918808,LOC100698262,LOC103361465,LOC103141620 coding upstream 81536 12685588 ~ 12693357 (+)
mosmoa c17h16orf52,c16orf52.L,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214 coding downstream 1305 12782750 ~ 12807896 (+)
sdr42e2 LOC103360721,LOC100712049 coding downstream 35670 12817115 ~ 12841345 (+)
mfsd13al LOC104947686,LOC100692111,LOC102297699,LOC101482249 coding downstream 72584 12854029 ~ 12859158 (+)
LOC120574877 LOC103393031,LOC103469206,LOC105930142,LOC107092540,LOC104925717,LOC108239269,LOC106518725 coding downstream 83490 12864935 ~ 12872915 (+)
proza NA coding downstream 141925 12923370 ~ 12931320 (+)
G154410 NA non-coding upstream 39981 12734683 ~ 12734912 (+)
G154385 NA non-coding upstream 206041 12566974 ~ 12568852 (+)
G154379 NA non-coding upstream 251221 12475767 ~ 12523672 (+)
G154367 NA non-coding upstream 372910 12401730 ~ 12401983 (+)
LOC120574756 NA non-coding upstream 432543 12341400 ~ 12342350 (+)
G154447 NA non-coding downstream 1329 12782774 ~ 12827577 (+)
LOC120574706 NA non-coding downstream 107974 12889419 ~ 12904818 (+)
G154494 LOC100710707 non-coding downstream 198808 12980253 ~ 12981635 (+)
LOC120574709 NA non-coding downstream 210458 12991903 ~ 12995560 (+)
G154535 NA non-coding downstream 246687 13028132 ~ 13034382 (+)
G154254 NA other upstream 659701 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 681335 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 1549644 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 1701067 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 2021995 10752160 ~ 10752898 (+)
G154461 NA other downstream 61978 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 235514 13016959 ~ 13026416 (+)
vasnb vasn other downstream 874570 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 987574 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 988258 13769703 ~ 13769776 (+)

Expression


Co-expression Network