slc5a11 (slc5a11,LOC102796461)


Basic Information

Item Value
gene id slc5a11
gene name slc5a11,LOC102796461
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12178289 ~ 12185788 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824946.1
TTGGCTAGTGAAGGAAACTTTTGAGAAACACAGAGATTCCTGCGATTGGACTCATGTAATTTGTGACATGTATTGTTTGGCCCAGACAACTCAGCTCAAGGATAGCCAGTGTGACAACTTACTGTAAGATGACCTTTGACATAACAGAAAGCCGCCAAGGGACCAGCATGCCCCCTTCTCCATCGCCCTCTCCTGGGGGCACAACTACCCTGGGTACTGTGGATATAGTTGTGCTGGTAGTCTACTTTCTGCTGGTTCTCGCTGTTGGCCTCTGGTCCATGTGGAGGACAAAGCGCAGCACGGTGGATGGATACTTCCTGGCTGGGAAGAACATGACCTGGTGGCCGGTGGGTGCCTCGCTGTTTGCCAGTAACATTGGCAGTGGGCATTTTATTGGCCTGGCAGGGTCAGGAGCCGCAGCAGGGATTGGGGCTATTGCATACGAGTGGAATGGAATTCTGatggtgctgctgctgggatGGCTCTTCCTGCCCATTTATATCTCCTCTGGGGTGATGACCATGCCAGAATATTTGCAGAGGCGATTTGGTGGCCGAAGAACTCAGATATTCATAGCTGTCCtgtccttatttatttacatcTTTACAAAGATATCGGTGGACATGTATGCTGGTGCACTCTTCATTCAGCTCGCCTTACAATGGAATATCTACCTTGCTGTGGTGATGCTGCTGTCGATCACAGCTCTCTACACCATAGCAGGTGGTCTGGCTGCAGTTATCTACACAGATGCTGCTCAAACTGCCATCATGCTGGCAGGAGCTCTCACCCTCATGGGCTTCAGCTTTGTGGAAGTTGGAGGCTGGGACGCTCTGATGGACGGATACCTCAACGCCATCCCTTCTGTTCGTGTGCCAAACTCAACGTGTGGCATCCCTCGAGATGACTCCTTCCACATATTCAGAGACCCGGTGAACTCTGACCTGCCTTGGCCCGGGGTCATCATCGGCATGTCCGTCCCCTCCATGTGGTATTGGTGTTCTGACCAGGTGATCGTGCAGCGATCCTTGTCTGCTAAGACCCTGACCCATGCAAAAGGTGGCTCACTCATGGCTGCTTATCTAAAAATTCTGCCTTTCTTTGCTATCATGCTGCCTGGCATGATCAGCAGGATACTTTACACAGATGACGTGGCGTGTGCAGAACCTGAGTTGTGTAAACAGATTTGTGGTAACCCGGTGGGTTGTTCAGATACAGCCTACGCCAGACTGGTCATGGAGCTGCTGCCTTCAGGGCTGCGAGGTTTGATGATGGCGGTAATGATTGCTGCACTCATGTCCTCTCTGACCTCCATCTTCAACAGCGCCAGCACCATTTTCACCATGGATCTATGGAAGACTTTCAGATCCCGTGCATCCGAGTGGGAACTTATGATTGTGGGCAGGGTATTTGTGCttgtgctggtggtggtgtccGTGCTGTGGATTCCTGTCGTCCAGGCCAGTCAGGGTGGGCAGCTTTTTATCTACATCCAGTCCATCAGCACCTACCTGCAGCCCCCAGTCTCCATCATCTTCCTCACAGGCTGCTTCTGGAAGAGGACTAATGAGAAGGGTGCATTCTGGGGCCTGGCTGTCGGCCTGTTGGTGGGCTGCATCCGCATGGTGTTGGACTTCATTTACCCTGCGCCCCTGTGCTACGAGGTGGATGACAGGCCCGGGGTGTTGAAATACGTCCATTACCTATACTTCTCCATGTTGCTGTCCTTCATCACCCTAGTTGTGGTGGTTGtagtcagcctggctacagagGAGCCCAAACCGGAGCAGATAAGTCGCCTCACCTGGTTCACTAGGTTTGACCCAGTGGAGCCCAAAGAGCAGGTCTTCTCAGTGGAGCGGCGCACGAAGAGCTTAGAGGTGATCACTAGTCAGACAAATGAGATGGGAGTCACAGGAAGAGAGCAGGAGAGCAGCAACGGAAAAACAAGTCATCACAGGAAAGACTCTTTATCCTCCGTGTCCAGCGTCCAGAGCCATTCCAGGCTGATGTCTGCCCTCTACTGGCTGTGTGGgatggagagaaggaaggagggagatgATAAATCTGTGACGCCTCCAGCACCTGCACAGGCCATCTGTTCTCTGGAGGAAAAGCCACGTCTACGACTCATTGTCAACGTCAACCTCGTTGTTTGCCTATCAGTAACTGCCTTTATCGTCGGCTACTGGGGTTGACAGATACTCTCAATGGACACATGGTGTGTGGGGTGGGTAAAAACTTGTGTGCAGATTTTTTCAGAGTATGAGAAGAAATTCTACTTTCTTCTTGTTTTCTTCCAATAACTGACAGtaaaattacataaattata
>XM_039824947.1
TAGTGAAGGAAACTTTTGAGAAACACAGAGATTCCTGCGATTGGACTCATGTAATTTGTGACATGTATTGTTTGGCCCAGACAACTCAGCTCAAGGATAGCCAGTGTGACAACTTACTATGACCTTTGACATAACAGAAAGCCGCCAAGGGACCAGCATGCCCCCTTCTCCATCGCCCTCTCCTGGGGGCACAACTACCCTGGGTACTGTGGATATAGTTGTGCTGGTAGTCTACTTTCTGCTGGTTCTCGCTGTTGGCCTCTGGTCCATGTGGAGGACAAAGCGCAGCACGGTGGATGGATACTTCCTGGCTGGGAAGAACATGACCTGGTGGCCGGTGGGTGCCTCGCTGTTTGCCAGTAACATTGGCAGTGGGCATTTTATTGGCCTGGCAGGGTCAGGAGCCGCAGCAGGGATTGGGGCTATTGCATACGAGTGGAATGGAATTCTGatggtgctgctgctgggatGGCTCTTCCTGCCCATTTATATCTCCTCTGGGGTGATGACCATGCCAGAATATTTGCAGAGGCGATTTGGTGGCCGAAGAACTCAGATATTCATAGCTGTCCtgtccttatttatttacatcTTTACAAAGATATCGGTGGACATGTATGCTGGTGCACTCTTCATTCAGCTCGCCTTACAATGGAATATCTACCTTGCTGTGGTGATGCTGCTGTCGATCACAGCTCTCTACACCATAGCAGGTGGTCTGGCTGCAGTTATCTACACAGATGCTGCTCAAACTGCCATCATGCTGGCAGGAGCTCTCACCCTCATGGGCTTCAGCTTTGTGGAAGTTGGAGGCTGGGACGCTCTGATGGACGGATACCTCAACGCCATCCCTTCTGTTCGTGTGCCAAACTCAACGTGTGGCATCCCTCGAGATGACTCCTTCCACATATTCAGAGACCCGGTGAACTCTGACCTGCCTTGGCCCGGGGTCATCATCGGCATGTCCGTCCCCTCCATGTGGTATTGGTGTTCTGACCAGGTGATCGTGCAGCGATCCTTGTCTGCTAAGACCCTGACCCATGCAAAAGGTGGCTCACTCATGGCTGCTTATCTAAAAATTCTGCCTTTCTTTGCTATCATGCTGCCTGGCATGATCAGCAGGATACTTTACACAGATGACGTGGCGTGTGCAGAACCTGAGTTGTGTAAACAGATTTGTGGTAACCCGGTGGGTTGTTCAGATACAGCCTACGCCAGACTGGTCATGGAGCTGCTGCCTTCAGGGCTGCGAGGTTTGATGATGGCGGTAATGATTGCTGCACTCATGTCCTCTCTGACCTCCATCTTCAACAGCGCCAGCACCATTTTCACCATGGATCTATGGAAGACTTTCAGATCCCGTGCATCCGAGTGGGAACTTATGATTGTGGGCAGGGTATTTGTGCttgtgctggtggtggtgtccGTGCTGTGGATTCCTGTCGTCCAGGCCAGTCAGGGTGGGCAGCTTTTTATCTACATCCAGTCCATCAGCACCTACCTGCAGCCCCCAGTCTCCATCATCTTCCTCACAGGCTGCTTCTGGAAGAGGACTAATGAGAAGGGTGCATTCTGGGGCCTGGCTGTCGGCCTGTTGGTGGGCTGCATCCGCATGGTGTTGGACTTCATTTACCCTGCGCCCCTGTGCTACGAGGTGGATGACAGGCCCGGGGTGTTGAAATACGTCCATTACCTATACTTCTCCATGTTGCTGTCCTTCATCACCCTAGTTGTGGTGGTTGtagtcagcctggctacagagGAGCCCAAACCGGAGCAGATAAGTCGCCTCACCTGGTTCACTAGGTTTGACCCAGTGGAGCCCAAAGAGCAGGTCTTCTCAGTGGAGCGGCGCACGAAGAGCTTAGAGGTGATCACTAGTCAGACAAATGAGATGGGAGTCACAGGAAGAGAGCAGGAGAGCAGCAACGGAAAAACAAGTCATCACAGGAAAGACTCTTTATCCTCCGTGTCCAGCGTCCAGAGCCATTCCAGGCTGATGTCTGCCCTCTACTGGCTGTGTGGgatggagagaaggaaggagggagatgATAAATCTGTGACGCCTCCAGCACCTGCACAGGCCATCTGTTCTCTGGAGGAAAAGCCACGTCTACGACTCATTGTCAACGTCAACCTCGTTGTTTGCCTATCAGTAACTGCCTTTATCGTCGGCTACTGGGGTTGACAGATACTCTCAATGGACACATGGTGTGTGGGGTGGGTAAAAACTTGTGTGCAGATTTTTTCAGAGTATGAGAAGAAATTCTACTTTCTTCTTGTTTTCTTCCAATAACTGACAGtaaaattacataaattata
>XM_039824948.1
TTGGCTAGTGAAGGAAACTTTTGAGAAACACAGAGATTCCTGCGATTGGACTCATGTAATTTGTGACATGTATTGTTTGGCCCAGACAACTCAGCTCAAGGATAGCCAGTGTGACAACTTACTGTAAGATGACCTTTGACATAACAGAAAGCCGCCAAGGGACCAGCATGCCCCCTTCTCCATCGCCCTCTCCTGGGGGCACAACTACCCTGGGTACTGTGGATATAGTTGTGCTGGTAGTCTACTTTCTGCTGGTTCTCGCTGTTGGCCTCTGGTCCATGTGGAGGACAAAGCGCAGCACGGTGGATGGATACTTCCTGGCTGGGAAGAACATGACCTGGTGGCCGGTGGGTGCCTCGCTGTTTGCCAGTAACATTGGCAGTGGGCATTTTATTGGCCTGGCAGGGTCAGGAGCCGCAGCAGGGATTGGGGCTATTGCATACGAGTGGAATGGAATTCTGatggtgctgctgctgggatGGCTCTTCCTGCCCATTTATATCTCCTCTGGGGTGATGACCATGCCAGAATATTTGCAGAGGCGATTTGGTGGCCGAAGAACTCAGATATTCATAGCTGTCCtgtccttatttatttacatcTTTACAAAGATATCGGTGGACATGTATGCTGGTGCACTCTTCATTCAGCTCGCCTTACAATGGAATATCTACCTTGCTGTGGTGATGCTGCTGTCGATCACAGCTCTCTACACCATAGCAGGTGGTCTGGCTGCAGTTATCTACACAGATGCTGCTCAAACTGCCATCATGCTGGCAGGAGCTCTCACCCTCATGGGCTTCAGCTTTGTGGAAGTTGGAGGCTGGGACGCTCTGATGGACGGATACCTCAACGCCATCCCTTCTGTTCGTGTGCCAAACTCAACGTGTGGCATCCCTCGAGATGACTCCTTCCACATATTCAGAGACCCGGTGAACTCTGACCTGCCTTGGCCCGGGGTCATCATCGGCATGTCCGTCCCCTCCATGTGGTATTGGTGTTCTGACCAGGTGATCGTGCAGCGATCCTTGTCTGCTAAGACCCTGACCCATGCAAAAGGTGGCTCACTCATGGCTGCTTATCTAAAAATTCTGCCTTTCTTTGCTATCATGCTGCCTGGCATGATCAGCAGGATACTTTACACAGATGACGTGGCGTGTGCAGAACCTGAGTTGTGTAAACAGATTTGTGGTAACCCGGTGGGTTGTTCAGATACAGCCTACGCCAGACTGGTCATGGAGCTGCTGCCTTCAGGGCTGCGAGGTTTGATGATGGCGGTAATGATTGCTGCACTCATGTCCTCTCTGACCTCCATCTTCAACAGCGCCAGCACCATTTTCACCATGGATCTATGGAAGACTTTCAGATCCCGTGCATCCGAGTGGGAACTTATGATTGTGGGCAGGGTATTTGTGCttgtgctggtggtggtgtccGTGCTGTGGATTCCTGTCGTCCAGGCCAGTCAGGGTGGGCAGCTTTTTATCTACATCCAGTCCATCAGCACCTACCTGCAGCCCCCAGTCTCCATCATCTTCCTCACAGGCTGCTTCTGGAAGAGGACTAATGAGAAGGGTGCATTCTGGGGCCTGGCTGTCGGCCTGTTGGTGGGCTGCATCCGCATGGTGTTGGACTTCATTTACCCTGCGCCCCTGTGCTACGAGGTGGATGACAGGCCCGGGGTGTTGAAATACGTCCATTACCTATACTTCTCCATGTTGCTGTCCTTCATCACCCTAGTTGTGGTGGTTGtagtcagcctggctacagagGAGCCCAAACCGGAGCAGATAAGTCGCCTCACCTGGTTCACTAGGTTTGACCCAGTGGAGCCCAAAGAGCAGGTCTTCTCAGTGGAGCGGCGCACGAAGAGCTTAGAGGTGATCACTAGTCAGACAAATGAGATGGGAGTCACAGGAAGAGAGCAGGAGAGCAGCAACGGAAAAACAAGTCATCACAGGAAAGCGTCCAGAGCCATTCCAGGCTGATGTCTGCCCTCTACTGGCTGTGTGGgatggagagaaggaaggagggagatgATAAATCTGTGACGCCTCCAGCACCTGCACAGGCCATCTGTTCTCTGGAGGAAAAGCCACGTCTACGACTCATTGTCAACGTCAACCTCGTTGTTT

Function

symbol description
slc5a11 Predicted to enable glucose:sodium symporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Predicted to be integral component of membrane. Orthologous to human SLC5A11 (solute carrier family 5 member 11).

NR:

description
PREDICTED: sodium/myo-inositol cotransporter 2

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K14391 SLC5A11, SMIT2, SGLT6; solute carrier family 5 (sodium/myo-inositol cotransporter), member 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824946.1 True 2332 mRNA 0.51 16 12178289 12185788
XM_039824947.1 False 2322 mRNA 0.51 16 12178294 12185788
XM_039824948.1 False 2135 mRNA 0.52 16 12178289 12185613

Neighbor

gene id symbol gene type direction distance location
grid2ipa LOC103361735,LOC102310441,LOC102202691,LOC102796762 coding upstream 531 12151296 ~ 12177758 (+)
e4f1 e4f1 coding upstream 27293 12143460 ~ 12150996 (+)
LOC120575115 haghl,LOC100699516,LOC104918824,LOC101076411 coding upstream 41034 12133972 ~ 12137255 (+)
LOC120575138 hagh,LOC100699784,LOC107092812 coding upstream 44834 12128791 ~ 12133455 (+)
LOC120573928 hs3st6 coding upstream 57463 12107860 ~ 12120826 (+)
si:ch73-374l24.1 LOC101487097,LOC103361464,LOC102304961,LOC106957043,LOC103141622 coding downstream 380572 12566360 ~ 12684418 (+)
cacng5b LOC104918808,LOC100698262,LOC103361465,LOC103141620 coding downstream 499800 12685588 ~ 12693357 (+)
LOC120574005 LOC101485652,LOC100697553,LOC108239271,LOC107376513,LOC106518736 coding downstream 552460 12738248 ~ 12745057 (+)
dxo dxo coding downstream 563423 12749211 ~ 12753360 (+)
anks4b anks4b coding downstream 575833 12761621 ~ 12765662 (+)
G154227 NA non-coding upstream 109537 12067737 ~ 12068752 (+)
G154226 NA non-coding upstream 112781 12065280 ~ 12065508 (+)
G154225 LOC105933046,LOC101076874,LOC102218385,LOC106948144,LOC103469244,LOC103141651 non-coding upstream 114017 12063970 ~ 12064272 (+)
G154215 NA non-coding upstream 157781 12020278 ~ 12020508 (+)
G154204 NA non-coding upstream 202577 11975019 ~ 11975712 (+)
G154297 NA non-coding downstream 1835 12187623 ~ 12190042 (+)
G154307 NA non-coding downstream 31088 12216876 ~ 12218005 (+)
LOC120574756 NA non-coding downstream 155612 12341400 ~ 12342350 (+)
G154367 NA non-coding downstream 215942 12401730 ~ 12401983 (+)
G154379 NA non-coding downstream 289979 12475767 ~ 12523672 (+)
G154254 NA other upstream 63097 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 84731 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 953040 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 1104463 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 1425391 10752160 ~ 10752898 (+)
G154461 NA other downstream 657635 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 831171 13016959 ~ 13026416 (+)
vasnb vasn other downstream 1470227 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 1583231 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 1583915 13769703 ~ 13769776 (+)

Expression


Co-expression Network