LOC120574573 (LOC104944233,LOC103373117)


Basic Information

Item Value
gene id LOC120574573
gene name LOC104944233,LOC103373117
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14957489 ~ 14961105 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824985.1
AATAACGCAGCGGCTAATCTCATAGAATATGCAAAGCTGCCATCACCAGAGAGGCTGGATGAAGACACAGAGTGGTTTGAGCTAAGTGGATGGCCACAGTATTACAttcacataggctaataataaaattaaatattacaTAAATAATAAGTTTACAGGACAACTACTTCGATGGGACTGCCGGTGAGTTCATTATAACATGGTTCATTAACAACTGAGAAGGTGTGGACAGATGGAGGACTGTCCATGATTTCGCCCGGGGGGGAAAAACGCCGTGGATCCATTAAGTGGACATTTGAACGCTCAGAAATTGGTCGAAACATCCGTCAAGAGCTTGATAATACCCGAGGAAAAAAAGCGAACATTTCGGACAAGGTTTTTACTGGAGTAAATCTACCTGAGTCACCTGTTGGAGCGGAGCTGCTCTCTATCATCAGTCCAGcagcAGCACTTTTCAAAATCTGCAGTGAAGCCATGGGACCGACCAGTGCTCCAAAAGGATGCGATTCCAGTATCAGCTCCATATATTACAACCTGTGTGACCTGACTACAGtgtggggggtggtggtggaggcCTTTGCTGCTGCTGGTTTGGTGACTTCCTTTGTTCTGTTGGTCATCCTCATGGCCAGCTTACCATTTGTGacagacaagaagagaaagagtATGGTGGTCCTGCAGGCCGGATTTCTGGTGTTTACTCTGGGACTCTTTGGGCTCACTTTTGCCTTCATTGTGGGTCGGTACTCCACCAGCTGTGCTGCACGGAGGTTCCTCTTTGGAGTACTGTTCTCAGGCTGTCTAGCCTGCCTGGTCATGCATGGGTTGTGGCTTGCCCTGCTGAAGCGGAGAGGCCGGGGGCCCAGGAGCTGGATGTTATCCCTGGGAGCCCTGGGTCTGTGGATGGTCGAGGTGATCATCAACACTGAGTGGCTTATCATCACTGTGGTCAGAAGCCCACCTGGAGGTGTAATCATCCCTGACATGTTCTGCAGCATTGCTAACCAGGACTTTGTGATGGCTCTGATCTATGTGATGGTTCTGCTACTAGCTGTGGTGCTGATGGCTGGGCCCTCACTGACACACAAGCACAAGCACTGGCGCCGAGATGGAGCCTTCATCCTGGTCACAGGGCTCTTCACCATGGCCATCTGGGTAGCTTGGACTGTCATGTACATCTATGGGAACAGAGTGGCAGGAAATCCCAGCTGGGACGATCCTACTCTGGCTGTAGCCGTGGTGTCAAATGCCTGGgtgttcctcttcctctacaCCATCCCAGAAATCTGCGTACTAACCCAGGAGGACCCAGACCAGGAGCAGCAATTTGATGAACCCGTTTATCCTGCCAGGAATCTGGTTTATGACAATATCCTTAAGGAGCCGGAGCCACTCCACCAGAACGTATACATGGAAAATAAAGCCTTCACTATGGACGAGCCTCCAACAGTACCTTCAAAGCCAGTGTCTCCATATGGTGCTTATAATGGTCAGCTACGAAGTTGTGTGTACCAGCCCACTGAAATAGCCCTGATTGCAAAGGGTATGACTAAGATGGACCAAGATGCGATGATGCCTCGAGCCAGAGCCCCCTCTCTAAATCCAGGAAGTGGCAGCTCCCAGCCTCGTTCCGCCGAGTCCTCACTGTTTTAAGGACTGTAAAGCGCAAGAAGCTTGAGTCGAGGGCGTCACTTACACAATCAGTTGTTTACAGCTATGAAATCTCCACCAGAGGTTTGTTCTCCCATCAGAGTTCCTTGtatcaaatgttttttgtcCTTGGCAAGAATCTTAAAACATGAACACTGTGGTGGTCAATCTGCAGCAATTACACTTTTTGTGACCTagcttctctcacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>XM_039824986.1
TAACGCAGCGGCTAATCTCATAGAATATGCAAAGCTGCCATCACCAGAGAGGCTGGATGAAGACACAGAGTGGTTTGAGCTAAGTGGATGGCCACAGTATTACAttcacataggctaataataaaattaaatattacaTAAATAATAAGTTTACAGGACAACTACTTCGATGGGACTGCCGGTGAGTTCATTATAACATGGTTCATTAACAACTGAGAAGGTGTGGACAGATGGAGGACTGTCCATGATTTCGCCCGGGGGGGAAAAACGCCGTGGATCCATTAAGTGGACATTTGAACGCTCAGAAATTGGTCGAAACATCCGTCAAGAGCTTGATAATACCCGAGGAAAAAAAGCGAACATTTCGGACAAGGTTTTTACTGGAGTAAATCTACCTGAGTCACCTGTTGGAGCGGAGCTGCTCTCTATCATCAGTCCAGcAGCACTTTTCAAAATCTGCAGTGAAGCCATGGGACCGACCAGTGCTCCAAAAGGATGCGATTCCAGTATCAGCTCCATATATTACAACCTGTGTGACCTGACTACAGtgtggggggtggtggtggaggcCTTTGCTGCTGCTGGTTTGGTGACTTCCTTTGTTCTGTTGGTCATCCTCATGGCCAGCTTACCATTTGTGacagacaagaagagaaagagtATGGTGGTCCTGCAGGCCGGATTTCTGGTGTTTACTCTGGGACTCTTTGGGCTCACTTTTGCCTTCATTGTGGGTCGGTACTCCACCAGCTGTGCTGCACGGAGGTTCCTCTTTGGAGTACTGTTCTCAGGCTGTCTAGCCTGCCTGGTCATGCATGGGTTGTGGCTTGCCCTGCTGAAGCGGAGAGGCCGGGGGCCCAGGAGCTGGATGTTATCCCTGGGAGCCCTGGGTCTGTGGATGGTCGAGGTGATCATCAACACTGAGTGGCTTATCATCACTGTGGTCAGAAGCCCACCTGGAGGTGTAATCATCCCTGACATGTTCTGCAGCATTGCTAACCAGGACTTTGTGATGGCTCTGATCTATGTGATGGTTCTGCTACTAGCTGTGGTGCTGATGGCTGGGCCCTCACTGACACACAAGCACAAGCACTGGCGCCGAGATGGAGCCTTCATCCTGGTCACAGGGCTCTTCACCATGGCCATCTGGGTAGCTTGGACTGTCATGTACATCTATGGGAACAGAGTGGCAGGAAATCCCAGCTGGGACGATCCTACTCTGGCTGTAGCCGTGGTGTCAAATGCCTGGgtgttcctcttcctctacaCCATCCCAGAAATCTGCGTACTAACCCAGGAGGACCCAGACCAGGAGCAGCAATTTGATGAACCCGTTTATCCTGCCAGGAATCTGGTTTATGACAATATCCTTAAGGAGCCGGAGCCACTCCACCAGAACGTATACATGGAAAATAAAGCCTTCACTATGGACGAGCCTCCAACAGTACCTTCAAAGCCAGTGTCTCCATATGGTGCTTATAATGGTCAGCTACGAAGTTGTGTGTACCAGCCCACTGAAATAGCCCTGATTGCAAAGGGTATGACTAAGATGGACCAAGATGCGATGATGCCTCGAGCCAGAGCCCCCTCTCTAAATCCAGGAAGTGGCAGCTCCCAGCCTCGTTCCGCCGAGTCCTCACTGTTTTAAGGACTGTAAAGCGCAAGAAGCTTGAGTCGAGGGCGTCACTTACACAATCAGTTGTTTACAGCTATGAAATCTCCACCAGAGGTTTGTTCTCCCATCAGAGTTCCTTGtatcaaatgttttttgtcCTTGGCAAGAATCTTAAAACATGAACACTGTGGTGGTCAATCTGCAGCAATTACACTTTTTGTGACCTagcttctctcacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>XM_039824987.1
AATAACGCAGCGGCTAATCTCATAGAATATGCAAAGCTGCCATCACCAGAGAGGCTGGATGAAGACACAGAGTGGTTTGAGCTAAGTGGATGGCCACAGTATTACAttcacataggctaataataaaattaaatattacaTAAATAATAAGTTTACAGGACAACTACTTCGATGGGACTGCCGGTGAGTTCATTATAACATGGTTCATTAACAACTGAGAAGGTGTGGACAGATGGAGGACTGTCCATGATTTCGCCCGGGGGGGAAAAACGCCGTGGATCCATTAAGTGGACATTTGAACGCTCAGAAATTGGTCGAAACATCCGTCAAGAGCTTGATAATACCCGAGGAAAAAAAGCGAACATTTCGGACAAGGTTTTTACTGGAGTAAATCTACCTGAGTCACCTGTTGGAGCGGAGCTGCTCTCTATCATCAGTCCAGCACTTTTCAAAATCTGCAGTGAAGCCATGGGACCGACCAGTGCTCCAAAAGGATGCGATTCCAGTATCAGCTCCATATATTACAACCTGTGTGACCTGACTACAGtgtggggggtggtggtggaggcCTTTGCTGCTGCTGGTTTGGTGACTTCCTTTGTTCTGTTGGTCATCCTCATGGCCAGCTTACCATTTGTGacagacaagaagagaaagagtATGGTGGTCCTGCAGGCCGGATTTCTGGTGTTTACTCTGGGACTCTTTGGGCTCACTTTTGCCTTCATTGTGGGTCGGTACTCCACCAGCTGTGCTGCACGGAGGTTCCTCTTTGGAGTACTGTTCTCAGGCTGTCTAGCCTGCCTGGTCATGCATGGGTTGTGGCTTGCCCTGCTGAAGCGGAGAGGCCGGGGGCCCAGGAGCTGGATGTTATCCCTGGGAGCCCTGGGTCTGTGGATGGTCGAGGTGATCATCAACACTGAGTGGCTTATCATCACTGTGGTCAGAAGCCCACCTGGAGGTGTAATCATCCCTGACATGTTCTGCAGCATTGCTAACCAGGACTTTGTGATGGCTCTGATCTATGTGATGGTTCTGCTACTAGCTGTGGTGCTGATGGCTGGGCCCTCACTGACACACAAGCACAAGCACTGGCGCCGAGATGGAGCCTTCATCCTGGTCACAGGGCTCTTCACCATGGCCATCTGGGTAGCTTGGACTGTCATGTACATCTATGGGAACAGAGTGGCAGGAAATCCCAGCTGGGACGATCCTACTCTGGCTGTAGCCGTGGTGTCAAATGCCTGGgtgttcctcttcctctacaCCATCCCAGAAATCTGCGTACTAACCCAGGAGGACCCAGACCAGGAGCAGCAATTTGATGAACCCGTTTATCCTGCCAGGAATCTGGTTTATGACAATATCCTTAAGGAGCCGGAGCCACTCCACCAGAACGTATACATGGAAAATAAAGCCTTCACTATGGACGAGCCTCCAACAGTACCTTCAAAGCCAGTGTCTCCATATGGTGCTTATAATGGTCAGCTACGAAGTTGTGTGTACCAGCCCACTGAAATAGCCCTGATTGCAAAGGGTATGACTAAGATGGACCAAGATGCGATGATGCCTCGAGCCAGAGCCCCCTCTCTAAATCCAGGAAGTGGCAGCTCCCAGCCTCGTTCCGCCGAGTCCTCACTGTTTTAAGGACTGTAAAGCGCAAGAAGCTTGAGTCGAGGGCGTCACTTACACAATCAGTTGTTTACAGCTATGAAATCTCCACCAGAGGTTTGTTCTCCCATCAGAGTTCCTTGtatcaaatgttttttgtcCTTGGCAAGAATCTTAAAACATGAACACTGTGGTGGTCAATCTGCAGCAATTACACTTTTTGTGACCTagcttctctcacacacacacacacacacacacacacacacacacacacacacacacacacacaca

Function

NR:

description
PREDICTED: G-protein coupled receptor family C group 5 member C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824985.1 True 1911 mRNA 0.49 4 14957489 14961105
XM_039824986.1 False 1906 mRNA 0.49 4 14957491 14961105
XM_039824987.1 False 1905 mRNA 0.49 4 14957489 14961105

Neighbor

gene id symbol gene type direction distance location
LOC120575419 LOC103373137,LOC102304397,LOC102213496 coding upstream 36807 14917820 ~ 14920682 (+)
LOC120575420 LOC104944239,LOC104925055 coding upstream 42688 14908491 ~ 14914801 (+)
zgc:112148 LOC104944227,LOC103373156 coding upstream 57697 14896424 ~ 14899792 (+)
LOC120573965 NA coding upstream 61857 14891067 ~ 14895632 (+)
amn NA coding upstream 79927 14875731 ~ 14877562 (+)
LOC120575438 LOC102783976,LOC102302891,LOC106674513,LOC106675063 coding downstream 31978 14993083 ~ 14998261 (+)
aatka LOC103361234 coding downstream 51688 15012793 ~ 15043696 (+)
sdk2a LOC103361238 coding downstream 230753 15191858 ~ 15276960 (+)
cdc42ep4a LOC104940296,LOC100697350,LOC103361240,LOC102780692 coding downstream 319536 15280641 ~ 15293971 (+)
LOC120575445 LOC104940295,LOC103361241,LOC104959451 coding downstream 349740 15310845 ~ 15313571 (+)
G155032 LOC104944234,LOC102212559,LOC101473443,LOC102786862,LOC102303581 non-coding upstream 3188 14952333 ~ 14954301 (+)
G154982 NA non-coding upstream 127325 14829502 ~ 14830164 (+)
LOC120575161 NA non-coding upstream 218773 14730618 ~ 14738716 (+)
G154883 NA non-coding upstream 486502 14470512 ~ 14470987 (+)
G154881 NA non-coding upstream 494026 14463262 ~ 14463463 (+)
G155036 ccdc137 non-coding downstream 6838 14967943 ~ 14969536 (+)
G155040 NA non-coding downstream 10147 14971252 ~ 14971468 (+)
G155041 NA non-coding downstream 10417 14971522 ~ 14971790 (+)
G155050 NA non-coding downstream 39903 15001008 ~ 15003646 (+)
G155077 NA non-coding downstream 94246 15055351 ~ 15115448 (+)
G154743 LOC102293104 other upstream 1103203 13847139 ~ 13854286 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other upstream 1175804 13769019 ~ 13781685 (+)
trnat-agu_6 NA other upstream 1187713 13769703 ~ 13769776 (+)
vasnb vasn other upstream 1265186 13656015 ~ 13692303 (+)
LOC120574968 LOC102294452 other upstream 1931073 13016959 ~ 13026416 (+)
si:dkey-282h22.5 NA other downstream 20131 14981236 ~ 14984745 (+)
LOC120574428 NA other downstream 24595 14985700 ~ 14986913 (+)
LOC120575440 LOC102304323 other downstream 30908 14992013 ~ 14992508 (+)
G155088 NA other downstream 174686 15135791 ~ 15139706 (+)
ndel1b ndel1,LOC104940291 other downstream 405815 15366920 ~ 15404605 (+)

Expression


Co-expression Network