dnaja3a (dnaja3,LOC102777832)


Basic Information

Item Value
gene id dnaja3a
gene name dnaja3,LOC102777832
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 13748920 ~ 13754367 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825274.1
CACTTCGTACCGGACATGCGCAGTTTGTCGGGAGCAGGGGCCGGTATTGGAATGATGGCGTCCTCGGCTGCCCGTTGCTCATCACGCTGGATTACTGTCATCGTGTCCTCTGGACATCGCAGGGCCGCCGGTGCTGTTGTCTGCACTGGCAATGGAGGGGTCCGCAGTATCTCTACCGTGGGAGCGGAACGACTGTGGCGGGGAGGGAACCTGATGTGTGGCGGAGCAGGGAAAGCGTTGACATTGAGAGGGCTGTCAGGTGTCAAATCGCCCCATGCTGCCTCCACACTTTCCTTTCACACTAGTGCCCCTGCTAGCAGCAAGCAGGACTTCTACCAGATCCTCGGCGTACCTCGCACAGCAACCCAGAAAGAGATCAAGAAAGCTTACTACCAGATGGCCAAAAAGTATCACCCTGACACCAACAAAGATGACCCACAAGCCAAGGAAAAATTTGCTCAGCTGGCCGAAGCTTATGAGATCCTGAGTGATgaaggaaagaggaagcagTACGATACGTATGGCTCAACGGGCTTTGAAGCTGGTCAGGCCGGTGGTGGAGGGCAGCGCTACTGGTCTGGACAGGCCAGCAGCGTGGACCCAGAGGAGCTCTTCCGCAAGATCTTTGGGGAATTCTCTGGAGGCCGGGGGTTTGGAGACTTCAATGCCATATTTGAACAGCCACAGGAGTACATCATGGAGCTGACCTTCACTCAGGCAGCAAAGGGAGTCAACAAAGAGTTTTCCGTTAACATAGAAGCAGCCTGCGAGCGCTGTGATGGTAAGGGGCACGAGCCAGGCACCAAAGTCCAGCACTGCAACTTCTGCAACGGCTCCGGCATGGAGACTGTGAACACGGGCCCGTTTGTGATGCGCTCCACATGTCGTCGTTGTGGTGGCAAAGGCACAGTCATTTCCACCCCCTGTCACTCCTGTAATGGGGTGGGACAGACCAAGCAGAGGAAGACTGTGATGGTCCCTGTGCCTGCAGGAGTGGAGGATGGTCAGACTGTCAGAATGCCAGTTGGTAAGAAGGAGATCTTCATCACATTTCGGGTCCAAAAAAGTCCTGTGTTCAGGAGGGACGGCGCAGACGTCCACTCTGACCTTTTTGTCTCTGTGGCGCAAGCTATCCTGGGCGGCACGGCCAGGACACAAGGCCTTTATGAAACCCTAAACTTATCAATCCCTGCAGGCATCCAGATAGACCAGAGGATTCGTCTGTCAGGGAAGGGGATCGCTCGCCTCAGTGGCCATGGCTTCGGAGACCATTATGtccatgtcaaaataaaagttccCAGGACACTGACCGACAGACAAAGAGCTCTGCTAATGAGCTACGCTGAGGAGGAGACGGATGTGGAGGGGACAGTAAACGGTGTCACTAACACCACCACAGGTGGGGGAAGCAGTGGTAAGCAGTCTGAGGCAGGGCAAAGCGAGCATGACAAGAAGGAAGGAGAGTTGAAACAAGAGGGGAGCTTCTTCTCCAAATTAAAGAAATTGTTTAGTTCTTTCTGACAGCCGCAAACCAGGTAAAAGGTCCTCCTGGAACTGAGAAGCTTCATCAGTAGATCAGAATGCAGAAGGGAGGACAGCGTAACGCAAGCACAGTCACATTATAAAGGGACAGGTGGCTAAGGAGTATTGGGCGTTGGATGAGGCCTATTGAGGTTCTGGATGGATCAGTACGGACCGACCTACCCAGCCCTGCAGTGAATAAGACAGAGGATCACCTGCTCTGTTCCTCTGCCATAGTGAATCCACACACAAGAGGATGTGTCAGTGCGCCAGTCACCTCTCCAGTCAGACGTCCACTGTGGCCATTTGGGCGGCAaagacttaaagtgctcatattatgctttttggcttttcccctttcttttattgtgatgtatatcttttttgtgcttGTTATAGGTTTACATCGTGAAAAAGTGAAAGTCCATCCCAAagaccatctccaacagaaaacactgttcacaaactgctccaaacagctctattgtagtccagcctttacttctgtgacaaacatgcgtcactttgtaacacacgtttaaatgctcgcctagctgcta
>XM_039825275.1
CCGGACATGCGCAGTTTGTCGGGAGCAGGGGCCGGTATTGGAATGATGGCGTCCTCGGCTGCCCGTTGCTCATCACGCTGGATTACTGTCATCGTGTCCTCTGGACATCGCAGGGCCGCCGGTGCTGTTGTCTGCACTGGCAATGGAGGGGTCCGCAGTATCTCTACCGTGGGAGCGGAACGACTGTGGCGGGGAGGGAACCTGATGTGTGGCGGAGCAGGGAAAGCGTTGACATTGAGAGGGCTGTCAGGTGTCAAATCGCCCCATGCTGCCTCCACACTTTCCTTTCACACTAGTGCCCCTGCTAGCAGCAAGCAGGACTTCTACCAGATCCTCGGCGTACCTCGCACAGCAACCCAGAAAGAGATCAAGAAAGCTTACTACCAGATGGCCAAAAAGTATCACCCTGACACCAACAAAGATGACCCACAAGCCAAGGAAAAATTTGCTCAGCTGGCCGAAGCTTATGAGATCCTGAGTGATgaaggaaagaggaagcagTACGATACGTATGGCTCAACGGGCTTTGAAGCTGGTCAGGCCGGTGGTGGAGGGCAGCGCTACTGGTCTGGACAGGCCAGCAGCGTGGACCCAGAGGAGCTCTTCCGCAAGATCTTTGGGGAATTCTCTGGAGGCCGGGGGTTTGGAGACTTCAATGCCATATTTGAACAGCCACAGGAGTACATCATGGAGCTGACCTTCACTCAGGCAGCAAAGGGAGTCAACAAAGAGTTTTCCGTTAACATAGAAGCAGCCTGCGAGCGCTGTGATGGTAAGGGGCACGAGCCAGGCACCAAAGTCCAGCACTGCAACTTCTGCAACGGCTCCGGCATGGAGACTGTGAACACGGGCCCGTTTGTGATGCGCTCCACATGTCGTCGTTGTGGTGGCAAAGGCACAGTCATTTCCACCCCCTGTCACTCCTGTAATGGGGTGGGACAGACCAAGCAGAGGAAGACTGTGATGGTCCCTGTGCCTGCAGGAGTGGAGGATGGTCAGACTGTCAGAATGCCAGTTGGTAAGAAGGAGATCTTCATCACATTTCGGGTCCAAAAAAGTCCTGTGTTCAGGAGGGACGGCGCAGACGTCCACTCTGACCTTTTTGTCTCTGTGGCGCAAGCTATCCTGGGCGGCACGGCCAGGACACAAGGCCTTTATGAAACCCTAAACTTATCAATCCCTGCAGGCATCCAGATAGACCAGAGGATTCGTCTGTCAGGGAAGGGGATCGCTCGCCTCAGTGGCCATGGCTTCGGAGACCATTATGtccatgtcaaaataaaagttccCAGGACACTGACCGACAGACAAAGAGCTCTGCTAATGAGCTACGCTGAGGAGGAGACGGATGTGGAGGGGACAGTAAACGGTGTCACTAACACCACCACAGGTAAAAGGTCCTCCTGGAACTGAGAAGCTTCATCAGTAGATCAGAATGCAGAAGGGAGGACAGCGTAACGCAAGCACAGTCACATTATAAAGGGACAGGTGGCTAAGGAGTATTGGGCGTTGGATGAGGCCTATTGAGGTTCTGGATGGATCAGTACGGACCGACCTACCCAGCCCTGCAGTGAATAAGACAGAGGATCACCTGCTCTGTTCCTCTGCCATAGTGAATCCACACACAAGAGGATGTGTCAGTGCGCCAGTCACCTCTCCAGTCAGACGTCCACTGTGGCCATTTGGGCGGCAaagacttaaagtgctcatattatgctttttggcttttcccctttcttttattgtgatgtatatcttttttgtgcttGTTATAGGTTTACATCGTGAAAAAGTGAAAGTCCATCCCAAagaccatctccaacagaaaacactgttcacaaactgctccaaacagctctattgtagtccagcctttacttctgtgacaaacatgcgtcactttgtaacacacgtttaaatgctcgcctagctgct

Function

symbol description
dnaja3 Enables several functions, including IkappaB kinase complex binding activity; NF-kappaB binding activity; and interferon-gamma receptor binding activity. Involved in several processes, including negative regulation of signal transduction; regulation of cellular protein metabolic process; and regulation of transcription, DNA-templated. Located in cytosol; mitochondrial nucleoid; and nucleus. Colocalizes with actin filament.

NR:

description
PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial isoform X2

GO: NA

KEGG:

id description
K09504 DNAJA3; DnaJ homolog subfamily A member 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825274.1 True 2081 mRNA 0.52 12 13748920 13754367
XM_039825275.1 False 1935 mRNA 0.53 11 13748929 13754366

Neighbor

gene id symbol gene type direction distance location
glis2b glis2,LOC102778126 coding upstream 117165 13602828 ~ 13631755 (+)
LOC120574401 NA coding upstream 288093 13454492 ~ 13460827 (+)
LOC120574400 gde1 coding upstream 294703 13448627 ~ 13454217 (+)
LOC120575071 dnaaf5,LOC102780779 coding upstream 300509 13423545 ~ 13448411 (+)
gprc5ba gprc5b,LOC103360712 coding upstream 796682 12938684 ~ 12952238 (+)
ccnf ccnf coding downstream 30469 13784836 ~ 13795684 (+)
abca3b NA coding downstream 42361 13796728 ~ 13827791 (+)
LOC120575447 LOC107083151 coding downstream 78204 13832571 ~ 13838091 (+)
LOC120575448 NA coding downstream 85782 13840149 ~ 13846908 (+)
LOC120575450 rnps1,LOC104933647,LOC103363435 coding downstream 109144 13863511 ~ 13866556 (+)
G154682 NA non-coding upstream 156286 13589517 ~ 13592634 (+)
G154661 LOC106942609 non-coding upstream 255059 13492585 ~ 13493861 (+)
G154639 NA non-coding upstream 264202 13484039 ~ 13484718 (+)
G154634 crebbp,LOC108247643,LOC106518707 non-coding upstream 273472 13474159 ~ 13475448 (+)
G154603 NA non-coding upstream 343226 13356223 ~ 13405694 (+)
LOC120575454 NA non-coding downstream 192239 13946606 ~ 13954723 (+)
G154777 NA non-coding downstream 295464 14049831 ~ 14056966 (+)
LOC120575155 NA non-coding downstream 353414 14107781 ~ 14241105 (+)
G154811 NA non-coding downstream 530807 14285174 ~ 14287984 (+)
G154824 NA non-coding downstream 571915 14326282 ~ 14326489 (+)
vasnb vasn other upstream 56617 13656015 ~ 13692303 (+)
LOC120574968 LOC102294452 other upstream 722504 13016959 ~ 13026416 (+)
G154461 NA other upstream 902323 12843423 ~ 12846597 (+)
G154254 NA other upstream 1633728 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 1655362 12089373 ~ 12093558 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 14652 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 15336 13769703 ~ 13769776 (+)
G154743 LOC102293104 other downstream 92772 13847139 ~ 13854286 (+)
si:dkey-282h22.5 NA other downstream 1226869 14981236 ~ 14984745 (+)
LOC120574428 NA other downstream 1231333 14985700 ~ 14986913 (+)

Expression


Co-expression Network