si:ch211-256e16.3 (LOC104947690,LOC100695876,LOC102213849,LOC101483797,LOC103360703)


Basic Information

Item Value
gene id si:ch211-256e16.3
gene name LOC104947690,LOC100695876,LOC102213849,LOC101483797,LOC103360703
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12766625 ~ 12774140 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039825718.1
GTCTCTTGAGCTGTGAGTGTCTTCCGGTGAGTCGCTTTAAATGCTGGTCGTTGCCGTTTGCCGTTTGATGGTGGGGAGAGTGGGCTCGCGTCAAAGTGGTCACGATTATGTCTGTCAGGCTTACCGAGCAAAGTGAGACATGGCTGAAATATTTGCTGTCAACGCCGGTTTGCCCTCGCCGTCCACTATAAACGTCACCTATCCGATCCAGGAGGACGCCAgcgccgctgctgctgccgccgcccCTCCATCCTCTCTGAGCAGTGAGGATTACCTATTTGTGGAGCCCCGGCACTCCAACACTGTCCTGCAGGGCCTCAACAGCCTGCGGCTCAACAACGCCTTCTGTGATGTGACCCTGTGCTGTGGAGGACAGGAGTTCCCCTGCCATCGCATTGTGCTGGCCTCCTTTAGCTCTTACTTCCAGGCAATGTTTTCCACTGACCTGATAGAGTCCAAACAGGAGCGTGTTGCCATCAATGGAGTTGAGCCTCAGATGATTGGCATGTTGGTGAGCTACGCTTACACCTCAGAGGTCTACATTTCTAAAGCAAATGTGCAGGCCCTGCTGGCAGCTGCCAATCTGCTGGATGTGATGGCTGTTCGAGAGGCCTGTTGTCGTTTCATGGAGCATCAGATGGATGAGATGAACTGTGTGGGGATTCACTGCTTTGCTGAGGCCCATTCTTGTAAGGTGCTGGAGAAACGCAGCATGGACTACATTCACGAGAACTTCAGCAGTGTTTCTCAGCAGGAGGAgttcctgtctctgtgtgtggacAAACTGACAGAAATCATTGCCAGTGATTTTCTCAATGTGCCTAAAGAGGAGATGGTGTTTGAGGCCGCCATATCGTGGTTGAATAAATGTACGTCTCGCAAACAGAGCTTTGAAAAGGTCCTTGAACATATCCGGCTGCCTCTCATCAGCCCCTACTACCTCCACGATGTGATCGAGTCTCTGGATGTGGTGAAGGAGAACCAGGGTTGCCAGAAGCTCATCTCTGAGGCCAAGGACTACCTGCTGCTAAAGGACCGCCGTGGAGAGCTCTACTGCTCCAGATCCAGGCCACGCAGGTCCACCGagACAGCTGAAGTGATAGTGACAGTTGGCGGGGAGGATGACAAGGTGGTTCTGCGCAGCGTCGAGAGCTTCGATCCTGTGACGAATCAATGGAAGAATCTGGCCTGCCTGCCATTCGCTGTGAGCAAACACGGGCTGGTCCTGTCAGACTCCACTCTGTATTTGGCAGGAGGAGAGTTTCCTGATGGCTCAGCCAGCAGAGAGATGTGGCGCTACGACCCCTGCTTCGACTCCTGGATGGAGATGGCTCCCATGAATGTAGCTCGCTCTGAGTTAGGCCTGGTGATGCTGGACGGCTTTGTGTATGCAGTGGGAGGGTGGGAGGGACGCTCTCGCCTGGACTCGGTGGAGTGCTACAACCCTCACACCAACTCCTGGCAATTCACAGAATCTGTGAAGATGGCTGTCACAAGTCCTGCTGTGGTGGCCCTGGACGGACTCCTCTATGTTACTGGTGGTGCAATTCTAGAGGATGGCGACGGCACAGACCTTGCTCAGGTGTACAACCCTAAAACCTCTGTATGGACAGAGGTTGCCCCCATGCAGATCGCTCGGTCTGGTTCAGCTGCTTGCACACTCAAAGGAAAGATTTATGTTATAGGTGGATGGCATGCCTCGACAGAGAACACCGATAAGGTGGAGTGTTACAATCCCAAAACCAATCAGTGGACCATGTGCGCCCCCATGAAAGAACGTCGCTACCGGCCTGGTGCTGCTGTGGTGGATGGAAAGATCTACGTCCTGGGAGGAGAAGAAGGCTGGGACAGATATCATGACACTATCGAGAGGTACTGTGACGAGAAGGACATGTGGGAGATCATTGGGGAGATGACCACCAGTCGCAGctggctcagctgtgtgtctctCCAGCTGAGGAAGGACCTCCACATAAGCAGCTTTCCCGGGACGCCAAATGACAGCTGATCTGTCTGAGGAAATCTTATGTGGTTATTCTTTGCACCCTCATTAGGGGACGGTGCCCTACAAAGCTCAGAGCTGTGGAGGACAGCGAACTGAGAAGGGATGCCTGGATTTGGCAGAGCGCTGTTTGAGCTGTTACAGGCGGCAAAGCGTAGTCTGTTTTTAAACTGACTGCTTGTGGTATAAGTCTCACTTGGGTCCTGTCTTTAGACGTGGCGACAAAGGAAACATCGTACATGAATCTCAAGTTACTGATTGACGACTGCAGTCATAACTCGCCTCCGTATGATGTATGTTTAGGGTACTGTTATTGTTCGAGCACCTGAACTCTGAAGGTTTACTCGGCCAACAAAGTGGATTTTTGTATTCTGTGGCGTATTTAATGGGGTGTGACTAGCTGTGAGAAAAAATGGTAAACATTACGCTCTATCAAAAGATGCTCTATGGGCCAAAGAATCTACAATGTATGTGAATATCTTCGAAGGTCTCCTGTGAAAAAGTCGTCTATACGTGAGCAGTGTTTTTGTAATTAATCTTTGTAAGTTCTGAATGATTGTCTTTACTACTTGTAATATGTtgagtatatttttttaatgtgcaTAATGCATTTTAGTGACTTTAAATGGAGTGGGTTCTAATaaagatttttaatta
>XM_039825719.1
CGCTTTAAATGCTGGTCGTTGCCGTTTGCCGTTTGATGGTGGGGAGAGTGGGCTCGCGTCAAAGTGGTCACGATTATGTCTGTCAGGCAATGTTTTCCACTGACCTGATAGAGTCCAAACAGGAGCGTGTTGCCATCAATGGAGTTGAGCCTCAGATGATTGGCATGTTGGTGAGCTACGCTTACACCTCAGAGGTCTACATTTCTAAAGCAAATGTGCAGGCCCTGCTGGCAGCTGCCAATCTGCTGGATGTGATGGCTGTTCGAGAGGCCTGTTGTCGTTTCATGGAGCATCAGATGGATGAGATGAACTGTGTGGGGATTCACTGCTTTGCTGAGGCCCATTCTTGTAAGGTGCTGGAGAAACGCAGCATGGACTACATTCACGAGAACTTCAGCAGTGTTTCTCAGCAGGAGGAgttcctgtctctgtgtgtggacAAACTGACAGAAATCATTGCCAGTGATTTTCTCAATGTGCCTAAAGAGGAGATGGTGTTTGAGGCCGCCATATCGTGGTTGAATAAATGTACGTCTCGCAAACAGAGCTTTGAAAAGGTCCTTGAACATATCCGGCTGCCTCTCATCAGCCCCTACTACCTCCACGATGTGATCGAGTCTCTGGATGTGGTGAAGGAGAACCAGGGTTGCCAGAAGCTCATCTCTGAGGCCAAGGACTACCTGCTGCTAAAGGACCGCCGTGGAGAGCTCTACTGCTCCAGATCCAGGCCACGCAGGTCCACCGagACAGCTGAAGTGATAGTGACAGTTGGCGGGGAGGATGACAAGGTGGTTCTGCGCAGCGTCGAGAGCTTCGATCCTGTGACGAATCAATGGAAGAATCTGGCCTGCCTGCCATTCGCTGTGAGCAAACACGGGCTGGTCCTGTCAGACTCCACTCTGTATTTGGCAGGAGGAGAGTTTCCTGATGGCTCAGCCAGCAGAGAGATGTGGCGCTACGACCCCTGCTTCGACTCCTGGATGGAGATGGCTCCCATGAATGTAGCTCGCTCTGAGTTAGGCCTGGTGATGCTGGACGGCTTTGTGTATGCAGTGGGAGGGTGGGAGGGACGCTCTCGCCTGGACTCGGTGGAGTGCTACAACCCTCACACCAACTCCTGGCAATTCACAGAATCTGTGAAGATGGCTGTCACAAGTCCTGCTGTGGTGGCCCTGGACGGACTCCTCTATGTTACTGGTGGTGCAATTCTAGAGGATGGCGACGGCACAGACCTTGCTCAGGTGTACAACCCTAAAACCTCTGTATGGACAGAGGTTGCCCCCATGCAGATCGCTCGGTCTGGTTCAGCTGCTTGCACACTCAAAGGAAAGATTTATGTTATAGGTGGATGGCATGCCTCGACAGAGAACACCGATAAGGTGGAGTGTTACAATCCCAAAACCAATCAGTGGACCATGTGCGCCCCCATGAAAGAACGTCGCTACCGGCCTGGTGCTGCTGTGGTGGATGGAAAGATCTACGTCCTGGGAGGAGAAGAAGGCTGGGACAGATATCATGACACTATCGAGAGGTACTGTGACGAGAAGGACATGTGGGAGATCATTGGGGAGATGACCACCAGTCGCAGctggctcagctgtgtgtctctCCAGCTGAGGAAGGACCTCCACATAAGCAGCTTTCCCGGGACGCCAAATGACAGCTGATCTGTCTGAGGAAATCTTATGTGGTTATTCTTTGCACCCTCATTAGGGGACGGTGCCCTACAAAGCTCAGAGCTGTGGAGGACAGCGAACTGAGAAGGGATGCCTGGATTTGGCAGAGCGCTGTTTGAGCTGTTACAGGCGGCAAAGCGTAGTCTGTTTTTAAACTGACTGCTTGTGGTATAAGTCTCACTTGGGTCCTGTCTTTAGACGTGGCGACAAAGGAAACATCGTACATGAATCTCAAGTTACTGATTGACGACTGCAGTCATAACTCGCCTCCGTATGATGTATGTTTAGGGTACTGTTATTGTTCGAGCACCTGAACTCTGAAGGTTTACTCGGCCAACAAAGTGGATTTTTGTATTCTGTGGCGTATTTAATGGGGTGTGACTAGCTGTGAGAAAAAATGGTAAACATTACGCTCTATCAAAAGATGCTCTATGGGCCAAAGAATCTACAATGTATGTGAATATCTTCGAAGGTCTCCTGTGAAAAAGTCGTCTATACGTGAGCAGTGTTTTTGTAATTAATCTTTGTAAGTTCTGAATGATTGTCTTTACTACTTGTAATATGTtgagtatatttttttaatgtgcaTAATGCATTTTAGTGACTTTAAATGGAGTGGGTTCTAATaaagatttttaatta

Function

NR:

description
PREDICTED: kelch-like protein diablo

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039825718.1 True 2659 mRNA 0.51 12 12766625 12774140
XM_039825719.1 False 2318 mRNA 0.49 11 12766657 12774140

Neighbor

gene id symbol gene type direction distance location
anks4b anks4b coding upstream 963 12761621 ~ 12765662 (+)
dxo dxo coding upstream 13265 12749211 ~ 12753360 (+)
LOC120574005 LOC101485652,LOC100697553,LOC108239271,LOC107376513,LOC106518736 coding upstream 21568 12738248 ~ 12745057 (+)
cacng5b LOC104918808,LOC100698262,LOC103361465,LOC103141620 coding upstream 73268 12685588 ~ 12693357 (+)
si:ch73-374l24.1 LOC101487097,LOC103361464,LOC102304961,LOC106957043,LOC103141622 coding upstream 82207 12566360 ~ 12684418 (+)
LOC120574126 LOC101483500,LOC100695608,LOC102213391,LOC102786175 coding downstream 753 12774893 ~ 12781445 (+)
mosmoa c17h16orf52,c16orf52.L,C20H16orf52,LOC108258941,LOC106518731,LOC102224510,LOC105910214 coding downstream 8610 12782750 ~ 12807896 (+)
sdr42e2 LOC103360721,LOC100712049 coding downstream 42975 12817115 ~ 12841345 (+)
mfsd13al LOC104947686,LOC100692111,LOC102297699,LOC101482249 coding downstream 79889 12854029 ~ 12859158 (+)
LOC120574877 LOC103393031,LOC103469206,LOC105930142,LOC107092540,LOC104925717,LOC108239269,LOC106518725 coding downstream 90795 12864935 ~ 12872915 (+)
G154410 NA non-coding upstream 31713 12734683 ~ 12734912 (+)
G154385 NA non-coding upstream 197773 12566974 ~ 12568852 (+)
G154379 NA non-coding upstream 242953 12475767 ~ 12523672 (+)
G154367 NA non-coding upstream 364642 12401730 ~ 12401983 (+)
LOC120574756 NA non-coding upstream 424275 12341400 ~ 12342350 (+)
G154447 NA non-coding downstream 8634 12782774 ~ 12827577 (+)
LOC120574706 NA non-coding downstream 115279 12889419 ~ 12904818 (+)
G154494 LOC100710707 non-coding downstream 206113 12980253 ~ 12981635 (+)
LOC120574709 NA non-coding downstream 217763 12991903 ~ 12995560 (+)
G154535 NA non-coding downstream 253992 13028132 ~ 13034382 (+)
G154254 NA other upstream 651433 12085861 ~ 12115192 (+)
LOC120574726 msrb1,LOC101472161,LOC105933050,LOC102798832 other upstream 673067 12089373 ~ 12093558 (+)
LOC120574068 NA other upstream 1541376 11207041 ~ 11225249 (+)
LOC120574482 znf207,LOC108444040,LOC108278632 other upstream 1692799 11063859 ~ 11073826 (+)
G153808 spag9 other upstream 2013727 10752160 ~ 10752898 (+)
G154461 NA other downstream 69283 12843423 ~ 12846597 (+)
LOC120574968 LOC102294452 other downstream 242819 13016959 ~ 13026416 (+)
vasnb vasn other downstream 881875 13656015 ~ 13692303 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other downstream 994879 13769019 ~ 13781685 (+)
trnat-agu_6 NA other downstream 995563 13769703 ~ 13769776 (+)

Expression


Co-expression Network