LOC120575419 (LOC103373137,LOC102304397,LOC102213496)


Basic Information

Item Value
gene id LOC120575419
gene name LOC103373137,LOC102304397,LOC102213496
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14917820 ~ 14920682 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826206.1
CAGAATCGGCCCAGCCCTCCCAGGCGGAAGTAATGGGGAGTGTGCGAAGCCACCGTTACAGCATTGTGTCCTCTGAAGAAGACGGCATGAAGCTGGCCACTATTGCCGTTCCGAATGGCTACGGAAACGGCAATGTCAACAAGGTGCACACACAGCGCAAACATCAGAGCCGCTTCGTCAGGAAGGATGGCCACTGCAATGTGCAGTTTATCAATATGAGTGAGAAAGGCCAGCGGTACCTGGCAGATATCTTCACCACCTGCGTGGACATCCGCTGGCGCTGGATGCTGCTCGTATTCTGCCTTTCCTTCCTGCTGTCATGGTTGTTTTTTGGCTTTGTCTTCTGGGTAGTGGCCCTCTGTTACGGAGACTTAGAGAATGAGACTCAGATGTGTGTTTCCAATGTAGACAGCTTCACCGCTGCCTTCTTGTTTTCAGTGGAGACCCAAACCACTATTGGCTATGGTTATCGCTATGTGACGGAGGAGTGCCCCGTTGCCGTCTTTGTGGTCGTCTTCCAAAGCATTGTGGGCTGCATCATCGATGCTTTCATTATCGGTGCTGTCATGGCCAAGATGGCCAAGCCCAAAAAGAGGAACGAGACCCTGGTGTTTAGCCATTATGCTGCAGTGGCCATGAGGGATGGTAAACTTTGCCTGATGTGGCGTGTGGGGAACCTCAGGAAGAGTCACCTGGTGGAGGCCCATGTGAGGGCCCAGCTACTCAAGTCTCGCACCACCGCCGAGGGAGAGTTCATACCTCTAGATCAGGTAGACATTGACGTAGGCTTCGATAGTGGCATTGACAGAATCTTCCTGGTGTCTCCAATCACCATTGTGCATGAGATTGATGAGGACAGCCCGTTCTATGAGATGAGCAAACAGGAGTTGGAGACGTCAGAGTTTGAGATCGTGGTGATTCTAGAGGGCATGGTGGAGGCTACAGCCATGACCACTCAGTGTCGGAGCTCCTACGTGGCCAGCGAGATCCTCTGGGGCTACCGCTTTGAGCCGGTGCTCTTTGAAGAAAAGAACTACTACAAAGTGGACTACTCTCGCTTTGAAAACACGTATGAGGTACCCAGCACACCCAACTGTAGTGCCAGGGAACTAGCCGAGAAGAAATCCAGCGCAGCCAGCTCGAGGAACTCCTTTTGCTACGAGAACGAAGTGGCTCTCGAAAAAGTCGAGATGGAGGAGGAGTTTGAGGAGGAGGAAAACAGGGAGGTGAGGGGTGTTGAGACCGGTGCACTcgaggacacaaacacagatgtgGTGTCAGAGTCTGAATGCAATGTGGATTCTTTGCCTTTAGAATCAAGGCCTTTGACAGCAGAATCACAAATATGAATGCAGGGATAAAAGAAGGGTTAAAAACTACTTCAGTGTATGTTAAAACTATTACATTTGATCCTGTTGTTTATAATGCATGACAGTTTGtgaaaaaatgtgatttgaGTATGAAGTTCTCTCTGCAGACGCTCACGCACAAGACACCATGGGAATCCAGAcatgatatattttttatggTGATAAATGAACTGGTTGCATGGAGCTATAGAGATAAAATGAGTTGGATGCCTTCACTTACACACTGTGCAGTCTGCCCTGCTTATTTAGTAGAATAGCCAATTGGGTTCTGAAATAATTCTTGTTTCCTAGAAAAATACAGTCTCTAATTTATTTAAGTGCATACTCCCAGTTTGCACATTTTGCATTGAACATCCTGGGAATAATAGGTATTTTTTTAGGCCTAAACATCCTATAAGGTTGTAAATGGCTAAAATAAGTATttactacatttaaaaaaaagagatttgttTTGAAATGCTGACCGCGTTTGAACTTCAAGAATCTTGTTTTAAATACTACTAAAAACATTTTGACCAGTTAAACAACCTGCACAAAGGCTACTGTTTGTTAATGAGCTGGTCTCTTAGCAAAGTATATTTACTGTCCTCTTCAGTGTGGTGGTCTTGGTGTGGCTTGCCTCGCACAGATTATGAGCACAAGTACATTGTGCTCCACAGGCCCATCATTGTCTATGTATAGCATCTTTTGCAACGTGTGCCTTAACAAAAGTCTCAGTTCCGGTGGAGGCACACACTGCAATAGATGTTACAGGAAGAAGGGGATTCCCTGTGCACTATACTGCCACTCCTTGCTGGTATTCATGTTCTAATGGTCAGTGGTAGAATGTGACAGGAAGCTCAACCCTGAGCCAAGGTTATGAATGTTGATGATAAGTGCTGCTAAGTTACATTTTGTATGTTTAGAGGGAAACCCACTagccaaaatgtattatttgtctTTTGAAGTATCCATTTTGAATATTGCAAATGCAGCCTATAATGTTGTTTATAGATATAGACGAGCATGATTCTGTCAGTGTGTTTTCCAAAGCTTTAGTGCACTTTTTTCCTCACCAGAGAATTTGTTATTTCTGAACGAACCCTTGCTTTCTTAAGATCACGTCTGATTGATATTTCAGTCACACAATGTAGCACACTTGACTTCAGTCTTACACAAGATTGagctttaatgttttttaactGTAATTGTGACACATTCATGCTTGGATCAGTGGAAGCCAGGACACTGTACTGCTTCTAGTAAGTATTATTTAAActaatttttaaaaacattttacatttaaacatttgatcTGTTCTCACATTGACACTTCTCCTGTCTTAGGTCTTTATTTTTCTACCAGGGTCATCTTCCCACCTTCCTGCACAAACCAGAGActgtacagattttttttttaatcttttgtaaattataatgcaaatactgtatattgataTTGCAATTGGTGAAAAAAGTTTGtccttttttcaataaaaatgtgATAACAAAAA

Function

NR:

description
PREDICTED: inward rectifier potassium channel 2-like

GO: NA

KEGG:

id description
K05330 KCNJN; potassium inwardly-rectifying channel subfamily J, other

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826206.1 True 2863 mRNA 0.43 1 14917820 14920682

Neighbor

gene id symbol gene type direction distance location
LOC120575420 LOC104944239,LOC104925055 coding upstream 3019 14908491 ~ 14914801 (+)
zgc:112148 LOC104944227,LOC103373156 coding upstream 18028 14896424 ~ 14899792 (+)
LOC120573965 NA coding upstream 22188 14891067 ~ 14895632 (+)
amn NA coding upstream 40258 14875731 ~ 14877562 (+)
hid1a LOC104925062,LOC103373194 coding upstream 48765 14858381 ~ 14869055 (+)
LOC120574573 LOC104944233,LOC103373117 coding downstream 36807 14957489 ~ 14961105 (+)
LOC120575438 LOC102783976,LOC102302891,LOC106674513,LOC106675063 coding downstream 72401 14993083 ~ 14998261 (+)
aatka LOC103361234 coding downstream 92111 15012793 ~ 15043696 (+)
sdk2a LOC103361238 coding downstream 271176 15191858 ~ 15276960 (+)
cdc42ep4a LOC104940296,LOC100697350,LOC103361240,LOC102780692 coding downstream 359959 15280641 ~ 15293971 (+)
G154982 NA non-coding upstream 87656 14829502 ~ 14830164 (+)
LOC120575161 NA non-coding upstream 179104 14730618 ~ 14738716 (+)
G154883 NA non-coding upstream 446833 14470512 ~ 14470987 (+)
G154881 NA non-coding upstream 454357 14463262 ~ 14463463 (+)
G154880 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 non-coding upstream 458667 14454839 ~ 14459153 (+)
G155032 LOC104944234,LOC102212559,LOC101473443,LOC102786862,LOC102303581 non-coding downstream 31651 14952333 ~ 14954301 (+)
G155036 ccdc137 non-coding downstream 47261 14967943 ~ 14969536 (+)
G155040 NA non-coding downstream 50570 14971252 ~ 14971468 (+)
G155041 NA non-coding downstream 50840 14971522 ~ 14971790 (+)
G155050 NA non-coding downstream 80326 15001008 ~ 15003646 (+)
G154743 LOC102293104 other upstream 1063534 13847139 ~ 13854286 (+)
LOC120573994 LOC103358698,LOC105416448,LOC106518660,LOC108275040,LOC108431896,LOC107695676 other upstream 1136135 13769019 ~ 13781685 (+)
trnat-agu_6 NA other upstream 1148044 13769703 ~ 13769776 (+)
vasnb vasn other upstream 1225517 13656015 ~ 13692303 (+)
LOC120574968 LOC102294452 other upstream 1891404 13016959 ~ 13026416 (+)
si:dkey-282h22.5 NA other downstream 60554 14981236 ~ 14984745 (+)
LOC120574428 NA other downstream 65018 14985700 ~ 14986913 (+)
LOC120575440 LOC102304323 other downstream 71331 14992013 ~ 14992508 (+)
G155088 NA other downstream 215109 15135791 ~ 15139706 (+)
ndel1b ndel1,LOC104940291 other downstream 446238 15366920 ~ 15404605 (+)

Expression


Co-expression Network