LOC120575445 (LOC104940295,LOC103361241,LOC104959451)


Basic Information

Item Value
gene id LOC120575445
gene name LOC104940295,LOC103361241,LOC104959451
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15310845 ~ 15313571 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039826240.1
TTCTCAGGCGGAGTCTGACTGGGGTGTGTGAGCCACATCTGGAATAGTAGCTCCAGAGAAAGAAGTCGAGAGAAGCAAAACCTCGCTGATACTTTCCACAACTCTTCACTTTAGCACTCCCTTTTTCTCGGAAACAAACCTATTGCTTTGCCTATTTATCTATTTGACAAAATGCTGCTCATTCTGCTTGGAGTGCTTATTTTGCACCTAATCATTCTCACTCTTCTCATCGTGTCGACAGCAGCCAGTGCCTGGTCTGTAGGTGGGGAAAGCAGCACAGATCTATGGTACAGCTGCACGACGACTAATGGAGGCTACCACTGCAAGACAGCCAGCACTGAAGACTGGATCCAGGCAGTACAAGCCCTCATGATCCTGTCCCTGCTATTCTGCTTCTTCTCCCTCATTGCGTTCGTGTTTCAGCTGTTCAAACTGGTCAAGGGCGGACGCTTCTTCTTCACTGCCATCTTCCAGATCTTGGCAAGTGTGTTTGTGATGTGCGGGGCGATCATCTACACCGTGATGAGTCCGGATAATGATACCACACAATTCGGCTACGCCTATGTGCTGGCCTGGGTggctttccctctctgtctcatcaGCGGCCTCATTTATATCGTCCTGAGGAAGAAAGAATGAGAGAAGgagcagaggagaaaagaggaggggtaGTTACTGTAAGATACCCCTTACAACAACATCACACTGTGCCTACTGCCCACAGACCAGACTGACATCCcacaacaatacaacaaaatTGCATGTGTCACTAAAAATTGTAAACACAAAAGGGAGACATTTATCATAGCAGGGGATCTTTTTTGCTGTATTTCAGTATCCATAATGTTCCCATCAAATGCTGAAAAATATCACACCTGTTCACATTGTGAATTTTAACAAAGTGTCACTACATGTTTCCCGCGGTGACAGATTGTCTTCAAactgtgtttatatatgtgttggcGACATATTGACTTTTGTTGCATGCTGGCACCCACAAATCGTGTGATTATAACAAAGATGAGTAATCCTGCCTCGCTTCAGTACAAAGATGTACATAGTGTCTGTGGCTTTTAGACATATTTATAacatttttacatacattttgtaCATAGTGTTGTCAAGTTAACATTATCATGCTCTTTTATGTGATAGAATTTTTTGTCTCTCACAAATCATGCAGCTGTGCCAAAGAGATGTCGCTTAAACTGCAAGAGTAGAGTGTCAAATGCTTTGAACCACGTGCCTTACTTAGAATATCTGTGTTCGTCTTGAAGGAAATGATAACACTCCTCAGAAAAAAGATAACAATAAGAAGTCTTAATAAACTCCTGAAGTTTTTCTGAATTATAATTGTACTTGATatgccaaataaaaaaatgattttgcattttgtaatctagttttgaaaaaaaatggtgCTTTTTTATACTATTCTTGAAATGTATAGCCTACTTTGTGATGAAAGTGTGTCATGTCCTGTGATTAATTTGCTTTGTACAAACCCCAGTTTGCATTTGTGTCATTATTCTTCTAAATAAACCCTTTGGAATGAA

Function

NR:

description
PREDICTED: peripheral myelin protein 22

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039826240.1 True 1556 mRNA 0.41 5 15310845 15313571

Neighbor

gene id symbol gene type direction distance location
cdc42ep4a LOC104940296,LOC100697350,LOC103361240,LOC102780692 coding upstream 16874 15280641 ~ 15293971 (+)
sdk2a LOC103361238 coding upstream 33885 15191858 ~ 15276960 (+)
aatka LOC103361234 coding upstream 267149 15012793 ~ 15043696 (+)
LOC120575438 LOC102783976,LOC102302891,LOC106674513,LOC106675063 coding upstream 312584 14993083 ~ 14998261 (+)
LOC120574573 LOC104944233,LOC103373117 coding upstream 349740 14957489 ~ 14961105 (+)
arhgap44a LOC103361248 coding downstream 47195 15360766 ~ 15390530 (+)
atp5pd atp5h,LOC103361245,LOC101487002 coding downstream 115247 15428818 ~ 15433287 (+)
znf750 NA coding downstream 182116 15495687 ~ 15499506 (+)
LOC120575067 NA coding downstream 222121 15535692 ~ 15537840 (+)
btr02 LOC104960320,LOC103356290,LOC100690538,LOC106529769 coding downstream 224050 15537621 ~ 15541106 (+)
G155104 NA non-coding upstream 137482 15173092 ~ 15173363 (+)
G155077 NA non-coding upstream 195397 15055351 ~ 15115448 (+)
G155050 NA non-coding upstream 307199 15001008 ~ 15003646 (+)
G155041 NA non-coding upstream 339055 14971522 ~ 14971790 (+)
G155040 NA non-coding upstream 339377 14971252 ~ 14971468 (+)
G155180 metrnl non-coding downstream 133313 15446884 ~ 15449558 (+)
G155197 LOC104918611,LOC104960327,LOC102777936,LOC100691075,LOC101487576 non-coding downstream 193482 15507053 ~ 15508319 (+)
G155212 NA non-coding downstream 230671 15544242 ~ 15544549 (+)
G155257 NA non-coding downstream 347797 15661368 ~ 15731815 (+)
G155346 NA non-coding downstream 577524 15891095 ~ 15892034 (+)
G155088 NA other upstream 171139 15135791 ~ 15139706 (+)
LOC120575440 LOC102304323 other upstream 318337 14992013 ~ 14992508 (+)
LOC120574428 NA other upstream 323932 14985700 ~ 14986913 (+)
si:dkey-282h22.5 NA other upstream 326100 14981236 ~ 14984745 (+)
G154743 LOC102293104 other upstream 1456559 13847139 ~ 13854286 (+)
ndel1b ndel1,LOC104940291 other downstream 53349 15366920 ~ 15404605 (+)
arl16 arl16 other downstream 196522 15510093 ~ 15512810 (+)
rasd2 NA other downstream 213283 15526854 ~ 15528470 (+)
LOC120574525 NA other downstream 573604 15887175 ~ 15891028 (+)
LOC120574544 pet100 other downstream 946113 16259684 ~ 16262058 (+)

Expression


Co-expression Network